BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0340.0002.p (659 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CAC0854 [J] COG0480 Translation elongation factors (GTPases) 682 0.0 CAC1448 [J] COG0480 Translation elongation factors (GTPases) 301 2e-81 all4338 [J] COG0480 Translation elongation factors (GTPases) 254 2e-67 sll1098 [J] COG0480 Translation elongation factors (GTPases) 243 5e-64 TM1503 [J] COG0480 Translation elongation factors (GTPases) 234 2e-61 >CAC0854 [J] COG0480 Translation elongation factors (GTPases) Length = 644 Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/650 (49%), Positives = 443/650 (68%), Gaps = 11/650 (1%) Query: 3 NITIGLLAHVDAGKTTFAEQLLYHTRAIRSRGRVDHKDTFLDTHEIEKARGITVFADQAE 62 N TIGLLAHVDAGKTT AEQ+LYHT +IR RGRVDHKD+FLD +EK RGITVF++QA Sbjct: 2 NRTIGLLAHVDAGKTTLAEQILYHTNSIRKRGRVDHKDSFLDNSLVEKERGITVFSEQAI 61 Query: 63 FILGGTRYFLLDTPGHVDFSPEMERALQVLDYAVVIVSAVEGVEGHTETVWQLLRNHGIP 122 F G+ YFL+DTPGH+DFSPEMERA++++DYAV+I+S V+GV+ TE +W+LLR + +P Sbjct: 62 FEFKGSTYFLVDTPGHIDFSPEMERAIEIMDYAVLIISGVDGVQSQTENIWRLLRKYNVP 121 Query: 123 TFFFINKTDRTGADPQRVFEEIRSGLSSSAWLLPQSECGKISEELKVFLAERDERLLDAY 182 T FFINK DR A ++V +EI L+S +L+ +E ++E F+AE ++ L + Y Sbjct: 122 TIFFINKMDRLNASKEKVIKEIVENLTSKVFLIEGNE---MNENTIEFIAENNDDLCEIY 178 Query: 183 LEGSLNDTGWREALRSMVREGTIFPCMEGSALQDVGIDVFLDVLKSLTVTDYDAGLPFAG 242 L + W +++ M+++ IFPC GSAL+D+GI+ FL + +T T+Y+ F G Sbjct: 179 LSSGYEENLWFNSMKEMIKKNIIFPCFTGSALEDIGIEYFLQKMNLITYTEYNETEEFLG 238 Query: 243 RVYKIRHDEKGTRITYIKALQGVLKVREELKYGASEDAEPERITGIRKVNGLKYASVDWA 302 VYKIR+D+ +I YIKAL+G +KV++E++ S E+I IR NG KY + A Sbjct: 239 LVYKIRYDDNKNKIVYIKALKGSVKVKDEVRVENS----SEKIEDIRFYNGNKYKTEHKA 294 Query: 303 AAGELFAVTGLSAVRPGDGVGVLQDRRDSELVPTLKSRVLFEPPVHLKEVLTAFQLLGAE 362 AAGELFAV G+ VR GD VG D+ ++PTLKS+V+F+ ++ +VL F+++ E Sbjct: 295 AAGELFAVVGIKNVRSGDFVGSFSDKIKYNMIPTLKSKVVFDEGINANQVLEYFKIIEEE 354 Query: 363 DPSLNVSWDMTLQELHIQVMGQIQLEILEQILRERFMIPVAFGPPEILYKETIAAPVYGC 422 +PSLN+ W+ L+ L I VMG+I+LEIL+ I+++RF + V FGP E+LYKETIA G Sbjct: 355 EPSLNILWNEKLRSLEIHVMGKIELEILKAIMKDRFNLEVDFGPCEVLYKETIAKKTNGY 414 Query: 423 GHFEPLKHYAEVLLRIEPGERGSGLVFINECHTDDLAAGYQHQVGQYLLESGHHGLLTGS 482 GHFEPL+HYAEV L++EP SG+ FI+EC T+ L G Q+ + ++ E HHG+LTGS Sbjct: 415 GHFEPLRHYAEVYLKLEPAPLNSGITFISECKTESLTLGEQNLIKTHIFEREHHGILTGS 474 Query: 483 PLTDLRMTLLSGRAHNKHTHGGDFREAALRALRQGLEQAENILLEPVYDLKIRIDTGDLG 542 +TD+++ L+ GR H KHT GGDFREA LRALRQGLE EN+LLEP Y KI +++ +G Sbjct: 475 VVTDIKVVLIDGRHHVKHTSGGDFREATLRALRQGLESTENVLLEPFYSFKIEVNSDSMG 534 Query: 543 KVMTDIQQANGRFSPPXXXXEITGTKAVISGKVPVATFLNYAVRLAALTQGKGALSLKVA 602 +VM DI + +G F+PP I K VI G+ PV F++Y L++ T+G+G +SL Sbjct: 535 RVMADINKMSGEFNPPY----IRENKCVIEGRGPVVEFMDYPASLSSFTKGRGRISLNFD 590 Query: 603 EYQPCHQTESVIALKNYNKDADPAYPSSSIFCAKGQSYSVPWDEAQAHMH 652 Y CH E VI NYNK+ D Y S+SIFC+KGQ+Y V MH Sbjct: 591 GYDVCHNREEVIHNINYNKNKDIEYTSTSIFCSKGQAYKVEGSRVVEFMH 640 >CAC1448 [J] COG0480 Translation elongation factors (GTPases) Length = 652 Score = 301 bits (771), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 197/635 (31%), Positives = 322/635 (50%), Gaps = 49/635 (7%) Query: 2 KNITIGLLAHVDAGKTTFAEQLLYHTRAIRSRGRVDHKDTFLDTHEIEKARGITVFADQA 61 K I IG++AHVDAGKTT E LLY++ AI+S G VD +T D+ E+E+ RGIT+ + Sbjct: 3 KIINIGIVAHVDAGKTTITENLLYYSGAIKSVGSVDSGNTQTDSMELERKRGITIKSSTI 62 Query: 62 EFILGGTRYFLLDTPGHVDFSPEMERALQVLDYAVVIVSAVEGVEGHTETVWQLLRNHGI 121 F + ++DTPGHVDF E+ER+L VLD A++++S VEG++ T ++ L+ I Sbjct: 63 SFNWNDVKINIIDTPGHVDFISEVERSLSVLDGAIIVISGVEGIQSQTRILFNTLKELNI 122 Query: 122 PTFFFINKTDRTGADPQRVFEEIRSGLSSSAWLLPQ--------------SECGKISEEL 167 PT F+NK DR GAD +VFEEI+ +S+ L + S+ I+ + Sbjct: 123 PTIIFVNKLDRIGADFNKVFEEIKKNISNRVVRLQEAYDMGSKDVYIRNLSDICPINNDA 182 Query: 168 KVFLAERDERLLDAYLEG-SLNDTGWREALRSMVREGTIFPCMEGSALQDVGIDVFLDVL 226 +++ DE L+ Y+ G N +E L REG+++P G+A +GI LD + Sbjct: 183 VDVISDLDEVFLERYISGVEPNKEEVQEKLSLYAREGSLYPVFCGAAAIGLGIGDLLDGI 242 Query: 227 KSLTVTDYDAGLPFAGR---------VYKIRHDEKGTRITYIKALQGVLKVREELKYGAS 277 S LPFAG V+KI + Y++ G + VR+ ++ + Sbjct: 243 CSY--------LPFAGDECEGNLSGVVFKIERTSTNEKKVYVRLFGGRVSVRDRIQVPSK 294 Query: 278 EDAEPERITGIRKVNGLKYASV---DWAAAGELFAVTGLSAVRPGDGVGVLQDRRDSELV 334 E E ++K+N L+ + AG++ + GL+ + GD +GV ++ + + Sbjct: 295 EIVEK-----VKKINSLENGRIIETQSIEAGDIGILYGLTDFQVGDVIGVSNNKIKNISI 349 Query: 335 --PTLKSRVLFEPPVHLKEVLTAFQLLGAEDPSLNVSWDMTLQELHIQVMGQIQLEILEQ 392 PTLK+ + +E+ A LL EDP L + + +E+++ + G++Q+EIL Sbjct: 350 AKPTLKTTISAIDKEENQELFKALTLLAEEDPLLELEMNDIDEEIYVNLFGEVQMEILSS 409 Query: 393 ILRERFMIPVAFGPPEILYKETIAAPVYGCGHF-EPLK-HYAEVLLRIEPGERGSGLVFI 450 IL + I V F + +YKE E L +A V L+IEP RG GL +I Sbjct: 410 ILDGLYGIKVEFSNIQTIYKEKPKGVGMSIMRMQEDLNPFWATVALKIEPKGRGEGLRYI 469 Query: 451 NECHTDDLAAGYQHQVGQYLLESGHHGLLTGSPLTDLRMTLLSGRAHNKHTHGGDFREAA 510 + L +Q+ + + ++++ GL G +TD ++TL G + + DFR Sbjct: 470 SNVSVGSLPKSFQNAIEEAVVKTSKQGLF-GWEVTDAKVTLTCGEFFSPASTPSDFRNVT 528 Query: 511 LRALRQGLEQAENILLEPVYDLKIRIDTGDLGKVMTDIQQANGRFSPPXXXXEITGTKAV 570 + L +A+ +LLEP+Y+ ++RI L K + D++ F P + G + Sbjct: 529 PMVFMEALYRAQTVLLEPLYEFELRIPQDVLSKAIWDLETMRAIFDSPI----VIGDEFS 584 Query: 571 ISGKVPVATFLNYAVRLAALTQGKGALSLKVAEYQ 605 I G +PV Y +++A+ T+GKG + K Y+ Sbjct: 585 IRGLIPVENSKEYKMKIASYTKGKGMFTTKFYGYK 619 >all4338 [J] COG0480 Translation elongation factors (GTPases) Length = 692 Score = 254 bits (650), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 203/696 (29%), Positives = 324/696 (46%), Gaps = 96/696 (13%) Query: 5 TIGLLAHVDAGKTTFAEQLLYHTRAIRSRGRVDHKDTFLDTHEIEKARGITVFADQAEFI 64 IG+ AH+DAGKTT E++L+++ I G V D + E+ RGIT+ A Sbjct: 12 NIGIAAHIDAGKTTTTERILFYSGIIHKIGEVHEGTAVTDWMDQERERGITITAAAISTS 71 Query: 65 LGGTRYFLLDTPGHVDFSPEMERALQVLDYAVVIVSAVEGVEGHTETVWQLLRNHGIPTF 124 + ++DTPGHVDF+ E+ER+++VLD + + +V GV+ +ETVW+ + +P Sbjct: 72 WKDYQINIIDTPGHVDFTIEVERSMRVLDGVIAVFCSVGGVQPQSETVWRQADRYKVPRI 131 Query: 125 FFINKTDRTGADPQRVFEEIRSGLSSSAWL--LP-------------------------- 156 FINK DRTGA+ RV E++R L ++A LP Sbjct: 132 AFINKMDRTGANFYRVHEQMRDRLRANAIAIQLPIGSENDFKGIVDLVRKRAYMYNNDQG 191 Query: 157 ------------QSECGKISEELKVFLAERDERLLDAYLEGS-LNDTGWREALRSMVREG 203 Q + + +L +AE D+ L+ Y +G L + R ALR G Sbjct: 192 TDIEETDIPADLQDQVEEYYTKLVEAVAETDDDLMSKYFDGEPLTEEEIRSALRKGTIAG 251 Query: 204 TIFPCMEGSALQDVGIDVFLDVLKSLTVTDY------------------------DAGLP 239 TI P + GSA ++ G+ + LD V DY D P Sbjct: 252 TIVPVLCGSAFKNKGVQLMLD-----AVVDYLPAPTEVPPIQGTLPNGDAIERRADDNEP 306 Query: 240 FAGRVYKIRHDEKGTRITYIKALQGVLKVREELKYGASEDAEPERITGIRKVNGLKYASV 299 A +KI D G R+T+++ GVLK + A+++ + ERI+ + + V Sbjct: 307 LAALAFKIMADPYG-RLTFVRVYSGVLK-KGSYVLNATKNKK-ERISRLVLMKADDRQDV 363 Query: 300 DWAAAGELFAVTGLSAVRPGD-----GVGVLQDRRDSELVPTLKSRVLFEPPVH--LKEV 352 + AG+L A GL GD G V+ + S +P V EP + ++ Sbjct: 364 EELRAGDLGAALGLKDTLTGDTITDEGAPVILE---SLFIPEPVISVAVEPKTKNDMDKL 420 Query: 353 LTAFQLLGAEDPSLNVSWDMTLQELHIQVMGQIQLEIL-EQILRERFMIPVAFGPPEILY 411 A Q L EDP+ V+ D + I MG++ LEIL +++LRE F + G P++ Y Sbjct: 421 SKALQSLSEEDPTFRVNVDPETNQTVIAGMGELHLEILVDRMLRE-FKVEANVGAPQVAY 479 Query: 412 KETIAAPVYGC-GHFEPLK----HYAEVLLRIEPGERGSGLVFINECHTDDLAAGYQHQV 466 +ETI PV G F Y V++ +EPGE G+G F+++ + Y Sbjct: 480 RETIRKPVTNVEGKFIRQSGGKGQYGHVVINLEPGEPGTGFEFVSKIVGGVVPKEYIGPA 539 Query: 467 GQYLLESGHHGLLTGSPLTDLRMTLLSGRAHNKHTHGGDFREAALRALRQGLEQAENILL 526 Q + ES G+L G PL D++ TL+ G H+ + F+ A AL++ + +A +LL Sbjct: 540 EQGMKESCESGILAGYPLIDVKATLVHGSYHDVDSSEMAFKIAGSMALKEAVLKASPVLL 599 Query: 527 EPVYDLKIRIDTGDLGKVMTDIQQANGRFSPPXXXXEITGTKAVISGKVPVATFLNYAVR 586 EP+ +++ + +G V+ D+ G+ + A ++ KVP+AT YA Sbjct: 600 EPMMKVEVEVPEDYIGNVIGDLISRRGQIESQSTEQGL----AKVASKVPLATMFGYATD 655 Query: 587 LAALTQGKGALSLKVAEYQ--PCHQTESVIALKNYN 620 + + TQG+G +++ + Y+ P E++IA N Sbjct: 656 IRSKTQGRGIFTMEFSHYEEVPRSVAETIIAKSKGN 691 >sll1098 [J] COG0480 Translation elongation factors (GTPases) Length = 691 Score = 243 bits (621), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 200/683 (29%), Positives = 319/683 (46%), Gaps = 81/683 (11%) Query: 5 TIGLLAHVDAGKTTFAEQLLYHTRAIRSRGRVDHKDTFLDTHEIEKARGITVFADQAEFI 64 IG+ AH+DAGKTT E++L+++ + G V D E+ RGIT+ A Sbjct: 12 NIGIAAHIDAGKTTTTERILFYSGVVHKIGEVHEGTAVTDWMAQERERGITITAAAISTD 71 Query: 65 LGGTRYFLLDTPGHVDFSPEMERALQVLDYAVVIVSAVEGVEGHTETVWQLLRNHGIPTF 124 G ++DTPGHVDF+ E+ER+++VLD + + +V GV+ +ETVW+ + +P Sbjct: 72 WLGHHINIIDTPGHVDFTIEVERSMRVLDGVIAVFCSVGGVQPQSETVWRQAERYQVPRI 131 Query: 125 FFINKTDRTGADPQRVFEEIRSGLSSSA------------------------WL------ 154 F+NK DRTGA+ RV ++I L ++A +L Sbjct: 132 AFVNKMDRTGANFFRVCQQIGDRLRANAVPVQIPIGSEAEFEGIVDLVRMKAYLYKNDLG 191 Query: 155 -------LPQSECGKISEELKVFL----AERDERLLDAYLEGS-LNDTGWREALRSMVRE 202 +P S K +EE ++ L AE D+ L++ YLEG L LR Sbjct: 192 TDIQEVPIPDSVKDK-TEEYRLRLVESVAEADDALMEKYLEGEELTADELVAGLRRGTIA 250 Query: 203 GTIFPCMEGSALQDVGIDVFLDVL-----KSLTVTDYDAGLP--------------FAGR 243 GT+ P + GSA ++ G+ + LD + L V + LP + Sbjct: 251 GTMVPVLCGSAFKNKGVQLLLDAVVDYLPSPLEVPAIEGHLPDGEVATRPAEDKAPLSAL 310 Query: 244 VYKIRHDEKGTRITYIKALQGVLKVREELKYGASEDAEPERITGIRKVNGLKYASVDWAA 303 +K+ D G R+T+++ GVL+ + E + ERI+ + + VD Sbjct: 311 AFKVMADPFG-RLTFVRVYSGVLEKGSYVLNSTKE--KKERISRLIILKADDRIEVDQLN 367 Query: 304 AGELFAVTGLSAVRPGDGVGVLQDR--RDSELVPTLKSRVLFEPPVH--LKEVLTAFQLL 359 AG+L AV GL GD + Q+ +S VP V EP + ++ A Q L Sbjct: 368 AGDLGAVLGLKDTLTGDTLCDDQEPIILESLFVPQPVISVAVEPKTKQDMDKLSKALQSL 427 Query: 360 GAEDPSLNVSWDMTLQELHIQVMGQIQLEIL-EQILRERFMIPVAFGPPEILYKETIAAP 418 EDP+ VS D + I MG++ LEIL +++LRE F + G P++ Y+ETI Sbjct: 428 SEEDPTFRVSVDPETNQTVIAGMGELHLEILVDRMLRE-FKVEANVGAPQVAYRETIRKA 486 Query: 419 VYGCGHFEPLK----HYAEVLLRIEPGERGSGLVFINECHTDDLAAGYQHQVGQYLLESG 474 V G F Y V++ +EP E G+G F+++ + Y Q + E+ Sbjct: 487 VQAEGKFIRQSGGKGQYGHVVIEVEPTEPGTGFEFVSKIVGGVIPKEYIAPSEQGMKEAC 546 Query: 475 HHGLLTGSPLTDLRMTLLSGRAHNKHTHGGDFREAALRALRQGLEQAENILLEPVYDLKI 534 G+L G P+ DL+ TL+ G H+ + F+ A A+R+ + QA+ +LLEPV ++I Sbjct: 547 ASGVLAGYPVIDLKATLVDGSFHDVDSSEMAFKIAGSMAIREAVGQADPVLLEPVMKVEI 606 Query: 535 RIDTGDLGKVMTDIQQANGRFSPPXXXXEITGTKAVISGKVPVATFLNYAVRLAALTQGK 594 + +G V+ D+ G I A ++ VP+A YA + + TQG+ Sbjct: 607 EVPDDFMGNVIGDLNARRGHIEGQETEQGI----AKVAASVPLAEMFGYATDIRSKTQGR 662 Query: 595 GALSLKVAEYQ--PCHQTESVIA 615 G S++ + Y P + E+++A Sbjct: 663 GIFSMEFSHYAEVPRNVAEAIVA 685 >TM1503 [J] COG0480 Translation elongation factors (GTPases) Length = 695 Score = 234 bits (598), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 196/695 (28%), Positives = 312/695 (44%), Gaps = 99/695 (14%) Query: 5 TIGLLAHVDAGKTTFAEQLLYHTRAIRSRGRVDHKDTFLDTHEIEKARGITVFADQAEFI 64 IG++AH+DAGKTT E++LY+T G VD +T D EK RGIT+ + Sbjct: 16 NIGIMAHIDAGKTTTTERILYYTGRKHFIGDVDEGNTTTDWMPQEKERGITIQSAATTCF 75 Query: 65 LGGTRYFLLDTPGHVDFSPEMERALQVLDYAVVIVSAVEGVEGHTETVWQLLRNHGIPTF 124 G R ++DTPGHVDF+ E+ERAL+VLD A+ + A GVE +ETVW+ + +P Sbjct: 76 WKGYRINIIDTPGHVDFTAEVERALRVLDGAIAVFDATAGVEPQSETVWRQADKYNVPRI 135 Query: 125 FFINKTDRTGADPQRVFEEIRSGLSSSA--------------------------WLLPQS 158 F+NK D+ GAD E + + L ++ W+ S Sbjct: 136 AFMNKMDKVGADFYMAVETLVTKLRANPIPVQMPIGSEKDFQGVIDLIKMKAIYWV---S 192 Query: 159 ECGKISEELKV-----------------FLAERDERLLDAYLEGSLNDTGW-REALRSMV 200 E G + EE + +AE DE +L+ YLEG + LR Sbjct: 193 EDGSVYEERDIPEELREEAEMRREEMLEKIAELDEEILEKYLEGEEISEEEIKRVLRKAT 252 Query: 201 REGTIFPCMEGSALQDVGIDVFLDVL-------------KSLTVTD-------YDAGLPF 240 E P + G+A + GI LD + K V+D D PF Sbjct: 253 IENKAVPVLCGAAKANKGIQPLLDAVIDYLPSPLDLPPVKGWRVSDGEVVYRKPDENEPF 312 Query: 241 AGRVYKIRHDEKGTRITYIKALQGVLKVREELKYGASEDAEPERITGIRKVNGLKYASVD 300 V+K++ D ++ Y + G L+ + Y +++ + ERI+ I ++ K VD Sbjct: 313 TALVFKVQVDPYIGKLVYFRVYSGRLE-KGSYVYNSTK-GQRERISRIVFMHADKREEVD 370 Query: 301 WAAAGELFAVTGLSAVRPGDGVGVLQDRRDSELVPTLKSRVLF-EPPVHL---------- 349 + G++ A GL + GD L D ++ P + ++ F EP + L Sbjct: 371 YVRPGDIAAGVGLKVSQTGD---TLCDEKE----PIILEKIDFPEPVISLAVEPVTKADE 423 Query: 350 KEVLTAFQLLGAEDPSLNVSWDMTLQELHIQVMGQIQLEILEQILRERFMIPVAFGPPEI 409 ++++ A L EDP+L V D E I MG++ LEI+ L+ F + V G P++ Sbjct: 424 EKLVKALLALSEEDPTLQVRVDKETGETIISGMGELHLEIVVDRLKREFGVNVRVGQPQV 483 Query: 410 LYKETIAAPVYGCGHFEPLK----HYAEVLLRIE--PGERGSGLVFINECHTDDLAAGYQ 463 Y+ETI G + Y V+LRIE P E G FI++ + + Sbjct: 484 AYRETIKKSAEAEGKYIRQTGGRGQYGHVILRIEPIPEEEGKNFEFIDKTVGGVIPKEFM 543 Query: 464 HQVGQYLLESGHHGLLTGSPLTDLRMTLLSGRAHNKHTHGGDFREAALRALRQGLEQAEN 523 + + E+ G L G P+ +R +L G H + F+ AA A ++ +++A+ Sbjct: 544 PAIEAGIKEAMMAGPLAGYPVVRVRAIVLDGSYHEVDSSEMAFKIAASMAFKEAMKKAQP 603 Query: 524 ILLEPVYDLKIRIDTGDLGKVMTDIQQANGRFSPPXXXXEITGTKAVISGKVPVATFLNY 583 +LLEP+ L+I +G +++D+ + E G VI KVP++ Y Sbjct: 604 VLLEPIMKLEITTPEEYMGNIISDLNSRRAKVE----SLETRGHLKVIVAKVPLSETFGY 659 Query: 584 AVRLAALTQGKGALSLKVAEYQ--PCHQTESVIAL 616 A L +L+QG+ + ++ + YQ P E +I + Sbjct: 660 ATVLRSLSQGRASYIMQFSHYQEVPEKIAEKIIKV 694 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.319 0.137 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 49,428,824 Number of extensions: 2179349 Number of successful extensions: 5933 Number of sequences better than 1.0e-05: 105 Number of HSP's gapped: 5713 Number of HSP's successfully gapped: 137 Length of query: 659 Length of database: 38,378,431 Length adjustment: 113 Effective length of query: 546 Effective length of database: 25,345,689 Effective search space: 13838746194 Effective search space used: 13838746194 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 119 (50.4 bits)