BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0331.0004.p (177 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mll1641 [S] COG2128 Uncharacterized conserved protein 142 2e-34 AGc871 [S] COG2128 Uncharacterized conserved protein 139 2e-33 SMc02239 [S] COG2128 Uncharacterized conserved protein 135 5e-32 PA0269 [S] COG2128 Uncharacterized conserved protein 131 6e-31 SMb20029 [S] COG2128 Uncharacterized conserved protein 122 3e-28 >mll1641 [S] COG2128 Uncharacterized conserved protein Length = 152 Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 64/143 (44%), Positives = 96/143 (67%) Query: 19 MAQRINYMQQSPEFSKKMMELSNAEKESSIEEKIRHLVHIRASQMNGCGFCLDMHVKEAK 78 M QR+ + ++PE K + L+ A E +E + HL+ +RASQ+NGC FC++MH +EA+ Sbjct: 1 MKQRMQFFAKAPEIMKAVSALNKAVDECGLEISLLHLIKLRASQINGCSFCVEMHSREAR 60 Query: 79 IHGESELRLYHISIWRESTLFSPRERAALAWTEVLTKLPEHGVSDDIYDRVRGQLSEKEI 138 GE+E RLY ++ W+ES LFS RERAA AWTE +T + +GVSD++Y R SE+E+ Sbjct: 61 RDGETEQRLYLVAAWKESPLFSERERAAFAWTEAVTLIANNGVSDELYARTLEHFSEEEL 120 Query: 139 SDLTFSIMAINAWNRVNVAFKNV 161 L+ ++ IN WNR+ V F+ + Sbjct: 121 VKLSVALGMINTWNRLCVPFQAI 143 >AGc871 [S] COG2128 Uncharacterized conserved protein Length = 167 Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 67/153 (43%), Positives = 99/153 (64%), Gaps = 3/153 (1%) Query: 19 MAQRINYMQQSPEFSKKMMELSNAEKESSIEEKIRHLVHIRASQMNGCGFCLDMHVKEAK 78 M RINY + SPE K +M L N + S +E + HL+ +RAS +NGC FC+DMHVKE++ Sbjct: 15 MKTRINYAKASPEAFKAVMALENYVQSSGLEHRFIHLIKLRASIINGCAFCVDMHVKESR 74 Query: 79 IHGESELRLYHISIWRESTLFSPRERAALAWTEVLTKLPEHGVSDDIYDRVRGQLSEKEI 138 G SE + +S+WRES +++ +ERA L W + +TK+ E G DD ++ +R S++EI Sbjct: 75 HDGLSEQWINLMSVWRESPVYTEQERALLGWVDAVTKIAETGAPDDAFETLRAHFSDEEI 134 Query: 139 SDLTFSIMAINAWNRVNVAFKN---VPGSADAA 168 +T +I AIN WNR+ V F++ V +A AA Sbjct: 135 VKITVAIGAINTWNRIAVGFRSQHPVEAAAKAA 167 >SMc02239 [S] COG2128 Uncharacterized conserved protein Length = 153 Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 60/144 (41%), Positives = 92/144 (63%) Query: 19 MAQRINYMQQSPEFSKKMMELSNAEKESSIEEKIRHLVHIRASQMNGCGFCLDMHVKEAK 78 M R+N+ + +P+ K + L + K S IE ++ HL+ +RASQ+NGC +C+DMH KEA+ Sbjct: 1 MQSRVNFAKAAPDAYKAVAALDSYVKGSGIEPRLIHLIKLRASQINGCAYCVDMHTKEAR 60 Query: 79 IHGESELRLYHISIWRESTLFSPRERAALAWTEVLTKLPEHGVSDDIYDRVRGQLSEKEI 138 G S+ + + +WRES F RERA L WTE LT + E DD Y+ ++ +E+E+ Sbjct: 61 HSGLSQQWINLVCVWRESPHFDERERAVLGWTEALTNVAETRAPDDAYEALKAHFNEEEM 120 Query: 139 SDLTFSIMAINAWNRVNVAFKNVP 162 + +T +I AIN WNR+ V F+ +P Sbjct: 121 TKITVAIGAINVWNRLCVGFRALP 144 >PA0269 [S] COG2128 Uncharacterized conserved protein Length = 145 Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 57/144 (39%), Positives = 90/144 (62%) Query: 19 MAQRINYMQQSPEFSKKMMELSNAEKESSIEEKIRHLVHIRASQMNGCGFCLDMHVKEAK 78 M R+ + + SP+ M+ L A ++ +E + LV++R SQ+NGC +C++MH +A+ Sbjct: 1 MTTRLEWAKASPDAYAAMLGLEKALAKAGLERPLIELVYLRTSQINGCAYCVNMHANDAR 60 Query: 79 IHGESELRLYHISIWRESTLFSPRERAALAWTEVLTKLPEHGVSDDIYDRVRGQLSEKEI 138 GE+E RL + +W+E+ F+PRERAALAWTE L +L + + + D +R +KEI Sbjct: 61 KAGETEQRLQALCVWQETPYFTPRERAALAWTEQLARLSQGALPHGLLDELREHFDDKEI 120 Query: 139 SDLTFSIMAINAWNRVNVAFKNVP 162 ++LT ++ AINAWNR V P Sbjct: 121 AELTLAVSAINAWNRFGVGMGMQP 144 >SMb20029 [S] COG2128 Uncharacterized conserved protein Length = 157 Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 61/140 (43%), Positives = 84/140 (60%), Gaps = 1/140 (0%) Query: 19 MAQRINYMQQSPEFSKKMMELSNAEKESSIEEKIRHLVHIRASQMNGCGFCLDMHVKEAK 78 M R++ +P K +S A SS+E + LV IRASQ+NGC C++MH EA+ Sbjct: 1 MTARLDPFAAAPSLMKSWFSISTA-VASSLESSLIELVKIRASQINGCANCINMHTAEAR 59 Query: 79 IHGESELRLYHISIWRESTLFSPRERAALAWTEVLTKLPEHGVSDDIYDRVRGQLSEKEI 138 GESE R+Y +S WRE+ ++ RERAALAWTE LT+L E Y+ ++ + +E+E Sbjct: 60 AKGESEQRIYLLSAWREAPCYTDRERAALAWTETLTRLSEGHAHAAAYEALKAEFTEEEQ 119 Query: 139 SDLTFSIMAINAWNRVNVAF 158 LT I IN WNR+ V F Sbjct: 120 VKLTLMINIINGWNRLAVGF 139 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.317 0.130 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 12,100,037 Number of extensions: 431047 Number of successful extensions: 820 Number of sequences better than 1.0e-05: 21 Number of HSP's gapped: 819 Number of HSP's successfully gapped: 21 Length of query: 177 Length of database: 38,378,431 Length adjustment: 99 Effective length of query: 78 Effective length of database: 26,960,365 Effective search space: 2102908470 Effective search space used: 2102908470 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 112 (47.8 bits)