BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0327.0003.p (332 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BH3739 [D] COG1077 Actin-like ATPase involved in cell morphogenesis 461 e-130 BS_mbl [D] COG1077 Actin-like ATPase involved in cell morphogenesis 429 e-120 lin2669 [D] COG1077 Actin-like ATPase involved in cell morphogen... 419 e-117 CAC2858 [D] COG1077 Actin-like ATPase involved in cell morphogen... 377 e-105 CAC1242 [D] COG1077 Actin-like ATPase involved in cell morphogen... 366 e-101 >BH3739 [D] COG1077 Actin-like ATPase involved in cell morphogenesis Length = 228 Score = 461 bits (1187), Expect = e-130, Method: Compositional matrix adjust. Identities = 0/331 (0%), Positives = 0/331 (0%) Query: 1 MLSKDIGIDLGTANVLIHVKGRGVVLDEPSVVTLESDTKKVLAVGEQARRMVGRTPGNIM 60 M + L + R + G+ G I Sbjct: 1 MRPAGRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWIT 60 Query: 61 TIRPLRDGVIADFAITEMMLKSFIDRVGGRSWYARPRILICAPTNITSVEQKSIREAAER 120 + E R + ++ + Sbjct: 61 AEYGMLPRSTHTRNAREAAKGKQGGRTMEIQRLIARALRAAVDLKALGEFTITLDCDVLQ 120 Query: 121 SGAKEVFMEEEPKAAAIGAGMDIYQPSGNMVVDIGGGTTDVAVLSMGDVVTASSIKIAGD 180 + A+ + +G + + G + + + ++ D Sbjct: 121 ADGGTRTASITGACVALVDALQKLVENGKLKTNPMKGMVAAVSVGIVNGEAVCDLEYVED 180 Query: 181 KFDEAXXXXXXXXXXXXXGERTAEDIKLNIGSVRPGGMKSEMDIRGRDMVSGLPQTLTIS 240 Sbjct: 181 240 Query: 241 SGEVKEALWDPVSSIVAAAKSVLERTPPELSADIIDRGVVLTGGGALLNGLDELLSEELH 300 Sbjct: 241 300 Query: 301 VPVWVAEDPMHCVVKGTGIMLDHLDKNVKKK 331 Sbjct: 301 331 >BS_mbl [D] COG1077 Actin-like ATPase involved in cell morphogenesis Length = 228 Score = 429 bits (1103), Expect = e-120, Method: Compositional matrix adjust. Identities = 0/313 (0%), Positives = 0/313 (0%), Gaps = 7/313 (2%) Query: 1 MLSKDIGIDLGTANVLIHVKGRGVVLDEPSVVTLESDTKKVLAVGEQARRMVGRTPGNIM 60 M + L + R + G+ G I Sbjct: 1 MRPAGRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWIT 60 Query: 61 TIRPLRDGVIADFAITEMMLKSFIDRVGGRSWYARPRILICAPTNITSVEQKSIREAAER 120 + E R + ++ + Sbjct: 61 AEYGMLPRSTHTRNAREAAKGKQGGRTMEIQRLIARALRAAVDLKALGEFTITLDCDVLQ 120 Query: 121 SGAKEVFMEEEPKAAAIGAGMDIYQPSGNMVVDIGGGTTDVAVLSMGDVVTASSIKIAGD 180 + A+ + +G + + G + + + ++ D Sbjct: 121 ADGGTRTASITGACVALVDALQKLVENGKLKTNPMKGMVAAVSVGIVNGEAVCDLEYVED 180 Query: 181 KFDEAXXXXXXXXXXXXXGERTAEDIKLNIGSVRPGGMKSEMDIRGRDMVSGLPQTLTIS 240 Sbjct: 181 240 Query: 241 SGEVKEALWDPVSSIVAAAKSVLERTPPELSADIIDRGVVLTGGGALLNGLDELLSEELH 300 Sbjct: 241 300 Query: 301 VP-------VWVA 306 Sbjct: 301 313 >lin2669 [D] COG1077 Actin-like ATPase involved in cell morphogenesis Length = 228 Score = 419 bits (1077), Expect = e-117, Method: Compositional matrix adjust. Identities = 0/323 (0%), Positives = 0/323 (0%) Query: 2 LSKDIGIDLGTANVLIHVKGRGVVLDEPSVVTLESDTKKVLAVGEQARRMVGRTPGNIMT 61 + + V + V ++ ++ E R + +T Sbjct: 1 MRPAGRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWIT 60 Query: 62 IRPLRDGVIADFAITEMMLKSFIDRVGGRSWYARPRILICAPTNITSVEQKSIREAAERS 121 K R L A E + Sbjct: 61 AEYGMLPRSTHTRNAREAAKGKQGGRTMEIQRLIARALRAAVDLKALGEFTITLDCDVLQ 120 Query: 122 GAKEVFMEEEPKAAAIGAGMDIYQPSGNMVVDIGGGTTDVAVLSMGDVVTASSIKIAGDK 181 A + AV A + Sbjct: 121 ADGGTRTASITGACVALVDALQKLVENGKLKTNPMKGMVAAVSVGIVNGEAVCDLEYVED 180 Query: 182 FDEAXXXXXXXXXXXXXGERTAEDIKLNIGSVRPGGMKSEMDIRGRDMVSGLPQTLTISS 241 Sbjct: 181 240 Query: 242 GEVKEALWDPVSSIVAAAKSVLERTPPELSADIIDRGVVLTGGGALLNGLDELLSEELHV 301 Sbjct: 241 300 Query: 302 PVWVAEDPMHCVVKGTGIMLDHL 324 Sbjct: 301 323 >CAC2858 [D] COG1077 Actin-like ATPase involved in cell morphogenesis Length = 228 Score = 377 bits (969), Expect = e-105, Method: Compositional matrix adjust. Identities = 0/325 (0%), Positives = 0/325 (0%) Query: 2 LSKDIGIDLGTANVLIHVKGRGVVLDEPSVVTLESDTKKVLAVGEQARRMVGRTPGNIMT 61 + + T G VL E + V + Sbjct: 5 GRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWITAEYG 64 Query: 62 IRPLRDGVIADFAITEMMLKSFIDRVGGRSWYARPRILICAPTNITSVEQKSIREAAERS 121 + P + + A + ++ A+ Sbjct: 65 MLPRSTHTRNAREAAKGKQGGRTMEIQRLIARALRAAVDLKALGEFTITLDCDVLQADGG 124 Query: 122 GAKEVFMEEEPKAAAIGAGMDIYQPSGNMVVDIGGGTTDVAVLSMGDVVTASSIKIAGDK 181 + + V +++ V ++ + + Sbjct: 125 TRTASITGACVALVDALQKLVENGKLKTNPMKGMVAAVSVGIVNGEAVCDLEYVEDSAAE 184 Query: 182 FDEAXXXXXXXXXXXXXGERTAEDIKLNIGSVRPGGMKSEMDIRGRDMVSGLPQTLTISS 241 Sbjct: 185 244 Query: 242 GEVKEALWDPVSSIVAAAKSVLERTPPELSADIIDRGVVLTGGGALLNGLDELLSEELHV 301 Sbjct: 245 304 Query: 302 PVWVAEDPMHCVVKGTGIMLDHLDK 326 Sbjct: 305 329 >CAC1242 [D] COG1077 Actin-like ATPase involved in cell morphogenesis Length = 228 Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust. Identities = 0/332 (0%), Positives = 0/332 (0%), Gaps = 9/332 (2%) Query: 2 LSKDIGIDLGTANVLIHVKGRGVVLDEPSVVTLESDTKKVLAVGEQARRMVGRTPGNIMT 61 S + + V+++ L + + + + G Sbjct: 6 RSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWITAEYGM 65 Query: 62 IRPLRDGVIADFAITEMMLKSFIDRVGGRSWYARPRILICAPTNITSVEQKSIREAAERS 121 + A A ++ + R + + A T + +A + Sbjct: 66 LPRSTHTRNAREAAKGKQGGRTMEIQRLIARALRAAVDLKALGEFTITLDCDVLQADGGT 125 Query: 122 GAKEVFMEEEPKAAAIGAGMDIYQPSGNMVVDIGGGTTDVAVLSMGDVVTASSIKIAGDK 181 + A+ ++ + N + + + V A + Sbjct: 126 RTASITGACVALVDALQKLVENGKLKTNPMKGMVAAVSVGIVNGEAVCDLEYVEDSAAET 185 Query: 182 FDEAXXXXXXXXXXXXXGERTAEDIKLNIGSVRPGGMKSE-----MDIRGRDMVSGLPQT 236 + + Sbjct: 186 DMNVVMTEDGRIIEVQGTAEGEPFTHEELLI----LLALARGESN 241 Query: 237 LTISSGEVKEALWDPVSSIVAAAKSVLERTPPELSADIIDRGVVLTGGGALLNGLDELLS 296 Sbjct: 242 301 Query: 297 EELHVPVWVAEDPMHCVVKGTGIMLDHLDKNV 328 Sbjct: 302 333 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.316 0.135 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 23,417,263 Number of extensions: 992894 Number of successful extensions: 2329 Number of sequences better than 1.0e-05: 56 Number of HSP's gapped: 2321 Number of HSP's successfully gapped: 56 Length of query: 332 Length of database: 38,378,431 Length adjustment: 107 Effective length of query: 225 Effective length of database: 26,037,693 Effective search space: 5858480925 Effective search space used: 5858480925 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 116 (49.3 bits)