BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0320.0008.p
         (66 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BH2835 [R] COG1418 Predicted HD superfamily hydrolase                  79   1e-15
SA1892 [R] COG1418 Predicted HD superfamily hydrolase                  57   5e-09
BS_ypgQ [R] COG1418 Predicted HD superfamily hydrolase                 54   7e-08
AF0994 [R] COG1418 Predicted HD superfamily hydrolase                  51   3e-07
L1008 [R] COG1418 Predicted HD superfamily hydrolase                   49   1e-06

>BH2835 [R] COG1418 Predicted HD superfamily hydrolase
          Length = 215

 Score = 79.3 bits (194), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/54 (66%), Positives = 44/54 (81%), Gaps = 1/54 (1%)

Query: 3   KEYRDYSKGTAVNHFYEKLLKLKDLMNTPYGRKLAEERHAFMESFLEQFYKEWN 56
           +EYR + K TA+NHFYEKL KLKDLMNT  G++LA+ERH FME F+E+F  EWN
Sbjct: 160 EEYR-HGKSTAINHFYEKLFKLKDLMNTETGKQLAKERHVFMEQFIERFLSEWN 212


>SA1892 [R] COG1418 Predicted HD superfamily hydrolase
          Length = 215

 Score = 57.4 bits (137), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/45 (53%), Positives = 35/45 (77%)

Query: 12  TAVNHFYEKLLKLKDLMNTPYGRKLAEERHAFMESFLEQFYKEWN 56
           +A+ HF+EKLLKL+ LM+T   + +A+ERH FM  +L+QF+ EWN
Sbjct: 168 SAIKHFFEKLLKLESLMHTDTAKMIAKERHDFMMMYLKQFFTEWN 212


>BS_ypgQ [R] COG1418 Predicted HD superfamily hydrolase
          Length = 205

 Score = 53.5 bits (127), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/43 (55%), Positives = 31/43 (72%)

Query: 12  TAVNHFYEKLLKLKDLMNTPYGRKLAEERHAFMESFLEQFYKE 54
           +A  HF+ KLL+LKD+MNT   R+LAEERH FM  F+ Q  K+
Sbjct: 154 SAYAHFFHKLLRLKDMMNTDTARELAEERHNFMLQFVRQLEKD 196


>AF0994 [R] COG1418 Predicted HD superfamily hydrolase
          Length = 185

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 31/44 (70%)

Query: 14  VNHFYEKLLKLKDLMNTPYGRKLAEERHAFMESFLEQFYKEWNQ 57
           + HF EKLLKL+DL+ T   RK+AEERH F+E F  Q  KE ++
Sbjct: 124 LKHFEEKLLKLRDLLYTETARKIAEERHRFLEIFYRQIKKELDE 167


>L1008 [R] COG1418 Predicted HD superfamily hydrolase
          Length = 216

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 35/56 (62%)

Query: 2   QKEYRDYSKGTAVNHFYEKLLKLKDLMNTPYGRKLAEERHAFMESFLEQFYKEWNQ 57
           +++Y      + +NHFYEKL  LKDL+NT  G++L E+R   M  F+ Q  +E+ +
Sbjct: 158 KEDYHSQKNNSTLNHFYEKLFLLKDLLNTTEGKRLGEKRDKIMHLFVSQIEEEYKE 213


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.316    0.133    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 5,264,208
Number of extensions: 183091
Number of successful extensions: 305
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 305
Number of HSP's successfully gapped: 6
Length of query: 66
Length of database: 38,378,431
Length adjustment: 38
Effective length of query: 28
Effective length of database: 33,995,739
Effective search space: 951880692
Effective search space used: 951880692
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 109 (46.6 bits)