BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0311.0011.p
         (308 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

alr1337 [O] COG1397 ADP-ribosylglycohydrolase                         127   2e-29
alr3188 [O] COG1397 ADP-ribosylglycohydrolase                          58   2e-08

>alr1337 [O] COG1397 ADP-ribosylglycohydrolase
          Length = 359

 Score =  127 bits (320), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 19/297 (6%), Positives = 38/297 (12%), Gaps = 35/297 (11%)

Query: 26  EFKAPGSFA--PLEDIVGGGVFGLQPGQWTDDTSMALCLADSLLASPGFDPADQMRRYVR 83
                 +                  P       +                          
Sbjct: 25  PASKMVAVVKANAYGHGLLETARTLPDADAFGVARLEEALRLRAGGITKPVLLL--EGFF 82

Query: 84  WFREGYLSSTGECFDIGNATRAALLQFEAG-GEAYSGSEDPRSAGNGPIMRLAPV----- 137
             R+    S        +         EA   E  +      +  +   +R         
Sbjct: 83  DARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWMKLDTGMHRLGVRPEQAEAFYH 142

Query: 138 ----------VMXXXXXXXXXXXXXXXXXXXXXXXXECVDACRLMAAYI--LAGLHG-WS 184
                      +                              +     I    G+     
Sbjct: 143 RLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTFCEGKPGQRSIAASGGILLWPQ 202

Query: 185 KQELLAPDAFGGWLEEEALSRSILDIKRGSYKLKAPPEIKGSGYVVQSLEAALWAFHGSS 244
                             +S                 +      +  +        H + 
Sbjct: 203 SHFDWVRPGII----LYGVSPLEDRS--------TGADFGCQPVMSLTSSLIAVREHKAG 250

Query: 245 SFAEGALLAVNLGDDADTTGAVYGQIAGAYYGLSGIPAQWSGRLAMRDLISDFAGRL 301
                    V+  D      A+           SG P   +GR              
Sbjct: 251 EPVGYGGTWVSERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPIVGRVAMDMIC 307


>alr3188 [O] COG1397 ADP-ribosylglycohydrolase
          Length = 359

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 17/235 (7%), Positives = 35/235 (14%), Gaps = 36/235 (15%)

Query: 51  QWTDDTSMALCLADSLLASPGFDPADQMRRYVRWFREGYL-SSTGECFDIGNATRAALLQ 109
                  +          + G    ++  R         +    G               
Sbjct: 36  NAYGHGLLETARTLPDADAFGVARLEEALRLRAGGITKPVLLLEGFFD------------ 83

Query: 110 FEAGGEAYSGSEDP-RSAGNGPIMRLAPVVMXXXXXXXXXXXXXXXXXXXXXXXXECVDA 168
                +  + S     +A +      A                            E  +A
Sbjct: 84  ---ARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWMKLDTGMHRLGVRP-EQAEA 139

Query: 169 CRLMAAYILAGLHGWSKQELLA--PDAFGGWLEEEALSRSILDIKRGSYKLKAPPEIKGS 226
                          +     A   +   G  E+       L I     + K        
Sbjct: 140 FYHRLTQCKNVRQPVNIVSHFARADEPKCGATEK------QLAIFNTFCEGKPG------ 187

Query: 227 GYVVQSLEAALWAFHGSSSFAEGALLAVNLGDDADTTGAVYGQIAGAYYGLSGIP 281
                   +        S F       +  G       +              + 
Sbjct: 188 --QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVM--SLT 238


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.319    0.137    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 20,894,136
Number of extensions: 812977
Number of successful extensions: 2238
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 2236
Number of HSP's successfully gapped: 3
Length of query: 308
Length of database: 38,378,431
Length adjustment: 106
Effective length of query: 202
Effective length of database: 26,153,027
Effective search space: 5282911454
Effective search space used: 5282911454
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 116 (49.3 bits)