BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0307.0074.p (234 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value MA1184 [M] COG0463 Glycosyltransferases involved in cell wall bi... 185 5e-47 aq_1899 [M] COG0463 Glycosyltransferases involved in cell wall b... 182 4e-46 XF2278 [M] COG0463 Glycosyltransferases involved in cell wall bi... 142 5e-34 CC0469 [M] COG0463 Glycosyltransferases involved in cell wall bi... 139 4e-33 AGc4038 [M] COG0463 Glycosyltransferases involved in cell wall b... 137 1e-32 >MA1184 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis Length = 314 Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 95/224 (42%), Positives = 142/224 (63%), Gaps = 3/224 (1%) Query: 4 LSVVAPVYNEEGNIYDLYLSITDALKGKIESYEILLVNDGSKDRSAVLLNEIAQMDKSVK 63 LSVV P YNEE NI Y IT AL+ +YEI+ V+DGSKD + L +++ D +K Sbjct: 5 LSVVIPAYNEEENIEPCYREITSALEPLGINYEIIFVDDGSKDSTFKELQNLSKNDNKLK 64 Query: 64 VIHFEKNYGQTAAVWAGIKNSTGELIALMDADLQTDPRDIFRLMPFIGR--IDFVNGKRI 121 VI F KN+GQ+AA+ AG+ ++ G +I MDADLQ DP+DI +L+ + + +D V G R Sbjct: 65 VIKFRKNFGQSAALRAGLDHAAGRIIVTMDADLQNDPKDIPKLLEKLEKEDLDVVCGWRF 124 Query: 122 DRKDTLLKKISSRIGNGIRNWITGDSIYDTGCPMKLFTRELADSLYLYNGMHRFLPTLAK 181 DRKD L KK S+ N +R TG++I+D+GC ++ + +E + L LY +HR++P + Sbjct: 125 DRKDPLSKKFVSKFANRLRTRFTGETIHDSGCTLRAYVKESTEDLELYGELHRYIPAMLS 184 Query: 182 MNGFSVIEVSVTHQERKHGVSKYRVLNRAYAGFMDALVIGWLKK 225 G+ + E+ H+ERK+G +KY R GF+D LV+ + +K Sbjct: 185 WKGYRIGEIKTNHRERKYGKTKYD-WKRIVKGFLDLLVVTFWQK 227 >aq_1899 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis Length = 322 Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 100/226 (44%), Positives = 140/226 (61%), Gaps = 3/226 (1%) Query: 4 LSVVAPVYNEEGNIYDLYLSITDALKGKIESYEILLVNDGSKDRSAVLLNEIAQMDKSVK 63 +SVV P YNEE NI LY + L E YEI+ V+DGS DR+ +L EIA DK VK Sbjct: 2 ISVVIPAYNEEENIPVLYEKLKKVLDSLGEDYEIIFVDDGSTDRTPEILKEIANKDKKVK 61 Query: 64 VIHFEKNYGQTAAVWAGIKNSTGELIALMDADLQTDPRDIFRLMPFIGR-IDFVNGKRID 122 VI F +NYGQTAA++AG +++ G++I MDADLQ DP DI +L+ + D V+G R D Sbjct: 62 VIRFRRNYGQTAAIYAGFEHAKGDVIITMDADLQNDPEDIPKLLEKMKEGYDIVSGWRKD 121 Query: 123 RKDTLL-KKISSRIGNGIRNWITGDSIYDTGCPMKLFTRELADSLYLYNGMHRFLPTLAK 181 RKD L +K+ S+I N I + +TG ++D GC +K + ++A LY MHRFLP LAK Sbjct: 122 RKDPFLSRKLPSKIANWIISKVTGVELHDYGCTLKAYKADIAKMYRLYGDMHRFLPALAK 181 Query: 182 MNGFSVIEVSVTHQERKHGVSKYRVLNRAYAGFMDALVIGWLKKRV 227 G + E+ V H R +G SKY + +R +D ++ +L + + Sbjct: 182 RFGAKITEIPVRHHPRLYGRSKYGI-DRTIRVILDIFLVKFLNEYI 226 >XF2278 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis Length = 253 Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 81/228 (35%), Positives = 118/228 (51%), Gaps = 5/228 (2%) Query: 3 RLSVVAPVYNEEGNIYDLYLSITDALKGKIESYEILLVNDGSKDRSAVLLNEIAQMDKSV 62 +LSVV PV+NE N+ L + I L+G + +EI+ V+D SKD + +L + + Sbjct: 18 QLSVVVPVFNERDNVAPLVVEIVSVLRG-VRVFEIVYVDDNSKDDTLSVLRGLKLSIPEL 76 Query: 63 KVIHFEKNYGQTAAVWAGIKNSTGELIALMDADLQTDPRDIFRLMPFIGR----IDFVNG 118 +V H GQ+ + G+K + + +D D Q DP DI +L+ + NG Sbjct: 77 RVFHHAVRAGQSTGIRNGVKAARAPWVVTLDGDGQNDPSDILKLLAAREAAAPAVKLFNG 136 Query: 119 KRIDRKDTLLKKISSRIGNGIRNWITGDSIYDTGCPMKLFTRELADSLYLYNGMHRFLPT 178 R+ R+DT+ K+ +S+ N IR + D DT C +KLF R L ++ MHRFLP Sbjct: 137 WRVYRQDTVSKRWASKWANTIRARVLRDDTPDTACGIKLFERAAFLELPHFDHMHRFLPV 196 Query: 179 LAKMNGFSVIEVSVTHQERKHGVSKYRVLNRAYAGFMDALVIGWLKKR 226 L + G+ V V H+ R GVSKY LNRA G D + WL R Sbjct: 197 LMQRAGWKTANVPVNHRSRVSGVSKYNNLNRALVGIRDLYGVAWLIAR 244 >CC0469 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis Length = 245 Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 80/228 (35%), Positives = 121/228 (53%), Gaps = 6/228 (2%) Query: 4 LSVVAPVYNEEGNIYDLYLSITDALKGKIESYEILLVNDGSKDRSAVLLNEIAQMDKSVK 63 SVV PV++E L I A G E+YE++ V+D S+D + L + ++ Sbjct: 11 FSVVVPVFDEGEAAPKLAREIAVAFAG--ENYEMIFVDDASRDDTKARLIALKAEIPQLR 68 Query: 64 VIHFEKNYGQTAAVWAGIKNSTGELIALMDADLQTDPRDIFRLMPFIG----RIDFVNGK 119 V+ KN GQ+ AV +GI + G +I +D D Q DP D RL + + V G+ Sbjct: 69 VLGHRKNSGQSRAVRSGILAARGGIIVTLDGDGQNDPADAPRLAKTLAAGPETLALVGGE 128 Query: 120 RIDRKDTLLKKISSRIGNGIRNWITGDSIYDTGCPMKLFTRELADSLYLYNGMHRFLPTL 179 R+ R+D+ K+ +S++GNG+R + D+ DTGC +K F RE L ++ +HR++P L Sbjct: 129 RVKRQDSSAKRFASKVGNGVRKRLLKDTAKDTGCGLKAFRREAFLRLPYFDHIHRYIPAL 188 Query: 180 AKMNGFSVIEVSVTHQERKHGVSKYRVLNRAYAGFMDALVIGWLKKRV 227 G+ V V H+ R+ GVSKY L R A D L + WL+ R Sbjct: 189 MLREGYEVAFQPVNHRHRETGVSKYTNLGRLKASISDLLGVMWLQSRA 236 >AGc4038 [M] COG0463 Glycosyltransferases involved in cell wall biogenesis Length = 301 Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 13/229 (5%), Positives = 49/229 (21%), Gaps = 7/229 (3%) Query: 4 LSVVAPVYNEEGNIYDLYLSITDALKGKIESYEILLVNDGSKDRSAVLLNEIAQMDKSVK 63 I ++ +++ + + + +R + D + Sbjct: 34 SITSRKAQTTRHRIVGIHTEGAYQAI-YVDTPGLHMEEKRAINRLMNKAASSSIGDVELV 92 Query: 64 VIHFEKNYGQTAAVWAGIKNSTGELIALMDADLQTDPRDIFRL------MPFIGRIDFVN 117 + E K G+ ++ + + ++ L + + Sbjct: 93 IFVVEGTRWTPDDEMVLNKLREGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFLDIV 152 Query: 118 GKRIDRKDTLLKKISSRIGNGIRNWITGDSIYDTGCPMKLFTRELADSLYLYNGMHRFLP 177 + + + + Y T + E+ + Sbjct: 153 PISAETGLNVDTIAAIVRKHLPEATHHFPEDYITDRSQRFMASEIIREKLMRFLGAELPY 212 Query: 178 TLAKMNGFSVIEVSVTHQERKHGVSKYRVLNRAYAGFMDALVIGWLKKR 226 ++ V + + + + G A + + Sbjct: 213 SVTVEIERFVSNERGGYDINGLILVEREGQKKMVIGNKGAKIKTIGIEA 261 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.322 0.139 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 17,060,011 Number of extensions: 686097 Number of successful extensions: 1832 Number of sequences better than 1.0e-05: 99 Number of HSP's gapped: 1816 Number of HSP's successfully gapped: 100 Length of query: 234 Length of database: 38,378,431 Length adjustment: 103 Effective length of query: 131 Effective length of database: 26,499,029 Effective search space: 3471372799 Effective search space used: 3471372799 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 114 (48.5 bits)