BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0307.0037.p
         (537 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BH1603 [E] COG2866 Predicted carboxypeptidase                         178   2e-44
BH3831 [E] COG2866 Predicted carboxypeptidase                          54   6e-07

>BH1603 [E] COG2866 Predicted carboxypeptidase
          Length = 355

 Score =  178 bits (452), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/290 (35%), Positives = 156/290 (53%), Gaps = 11/290 (3%)

Query: 51  YSYTVMQRDIERLVKEYPDLVSTESLGQTAYGRQLWAVKLGRGESVLFLNGSHHAREWMT 110
           Y YT +  D  RL ++    V    +G++  G+++ A ++G GE  +F +G  HA EW T
Sbjct: 67  YGYTELLLDRNRLKQQ---RVKESVIGKSVMGKEIVAFEIGSGEIPIFYSGGWHANEWHT 123

Query: 111 SALLMKMIDTYAQAYYSNGKIADYNVRSLLDEVSIWVVPMVNPDGVTLSQQGTAGLPVNL 170
           +  LM  + T  +A  S   +  Y+V  LL +V++ +VP+VNPDGV L QQG        
Sbjct: 124 AKFLMTFLQTLIEAEVSKADLFGYSVYELLKKVTLHLVPLVNPDGVELVQQGIYPEHPFY 183

Query: 171 AQTLRRYNGNSTNFNRWKANMQGIDLNRQYPARW-TTIQDAVKYPWYQNYKGQKPGQAPE 229
            Q L    G  T F+ W +N++G+DLN Q+PA W     ++ + PW ++Y G  P   PE
Sbjct: 184 EQVLAINKGART-FDHWSSNIRGVDLNHQWPAGWEKEAAESPQQPWPRHYSGPSPLSEPE 242

Query: 230 VQMMMDFTHKVDPEVTISYHSSGEIIFWHFNTLNSNLARDKTMARALGNLTGYSLVIPQK 289
              + ++T   D    +++HS G+ I+W +     N++  K M   L  ++ Y  V    
Sbjct: 243 AIAIYEYTKANDFAYVLAFHSQGQEIYWGYKGFEPNVS--KAMVERLSLMSSYKPV--HT 298

Query: 290 NPSGGGYKDWFIQEYGRPGFTIEIANYAGESSVPLRQFSGIWSENKEVGL 339
             S GGYKDWFIQE  RPGFTIE+    G++ +PL  F  IWS N  + L
Sbjct: 299 ADSDGGYKDWFIQETRRPGFTIEVG--VGKNPLPLEAFGEIWSNNILLAL 346


>BH3831 [E] COG2866 Predicted carboxypeptidase
          Length = 351

 Score = 53.9 bits (128), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 88/217 (40%), Gaps = 39/217 (17%)

Query: 45  VNPNQVYSYTVMQRDIERLVKEYPDLVSTESLGQTAYGRQLWAVKLG---RGESVLFLNG 101
           +   +V +Y  M   +E  V    DL+  E++GQ+  GR L+ V  G      +++FL  
Sbjct: 43  IKKERVKNYEEMVSFLEH-VTSRSDLLELETIGQSVMGRDLFLVTFGTNPDNPTIVFLTQ 101

Query: 102 SHHAREWMTSALL--MKMIDTYAQAYYSNGKIADYNVRSLLDEVSIWVVPMVNPDGVTLS 159
            H   E +T   L  +K + T ++            VR L D V++  VP +NPDG    
Sbjct: 102 QHGNEEMVTEGALNVIKNLSTNSR-----------QVRELADSVNVLFVPRLNPDGA--- 147

Query: 160 QQGTAGLPVNLAQTLRRYNGNSTNFNRWKANMQGIDLNRQYPARWTTIQDAVKYPWYQNY 219
                    ++   L  Y G   +    + N  G+DLNR +         A+     Q Y
Sbjct: 148 -------EADVLFELEDYVGGGLS---TRTNANGVDLNRDHTDLTQPETRALHENVLQKY 197

Query: 220 KGQKPGQAPEVQMMMDFTHKVDPEVTISYHSSGEIIF 256
                    ++  ++DF H+   +     + SG +++
Sbjct: 198 ---------DIDYLIDFHHQGTSQAIDGRYVSGSMLY 225


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.316    0.132    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 37,284,446
Number of extensions: 1506263
Number of successful extensions: 2473
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 2469
Number of HSP's successfully gapped: 2
Length of query: 537
Length of database: 38,378,431
Length adjustment: 111
Effective length of query: 426
Effective length of database: 25,576,357
Effective search space: 10895528082
Effective search space used: 10895528082
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 118 (50.1 bits)