BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0307.0014.p (194 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SA0330 [J] COG1670 Acetyltransferases, including N-acetylases of... 84 1e-16 PA3248 [J] COG1670 Acetyltransferases, including N-acetylases of... 76 3e-14 BS_ydaF [J] COG1670 Acetyltransferases, including N-acetylases o... 74 1e-13 PA1472 [J] COG1670 Acetyltransferases, including N-acetylases of... 72 6e-13 mll7514 [J] COG1670 Acetyltransferases, including N-acetylases o... 72 6e-13 >SA0330 [J] COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins Length = 181 Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 88/172 (51%), Gaps = 3/172 (1%) Query: 19 TERLLVRAPQWGDGRAVNEAIRESLEELKPWMPFAQSMPALEESEIYVRDSRLKFLNRTV 78 E++ ++ + D A+ + S L+ W+P+ + ++ +++ L+F + Sbjct: 7 NEQITLKILEAHDTEALFNLVNRSRNSLREWLPWVDATEQPSDTRAFIKRGLLQFADGNG 66 Query: 79 LNMLIFHKTEGTFLGCTGLHHIDWETRCFEAGYWLRTTCTGKGYITEAVNGITRFAIQEL 138 I++ EGT +G GLH I+ R GY+L G G +T+AV + ++ +EL Sbjct: 67 FQCGIWY--EGTLVGVIGLHEINHMHRKTSLGYYLDKQFEGHGIMTQAVEALIKYCFEEL 124 Query: 139 AANRIEIRCSGLNTRSAAVAERAGFLLDGTLRLNTLGLDGEMHDSKVYAKVR 190 NRIEI + N +S A+ ER GF +G LR N L L+G S +Y+ ++ Sbjct: 125 DLNRIEISAAVNNEKSRAIPERLGFTREGMLRDNEL-LNGIYSSSYIYSLLK 175 >PA3248 [J] COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins Length = 183 Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 3/152 (1%) Query: 39 IRESLEELKPWMPFAQSMPALEESEIYVRDSRLKFLNRTVLNMLIFHKTEGTFLGCTGLH 98 +R + E L PWMP+ +++++ ++ + + + R I G +G LH Sbjct: 27 VRANSEHLAPWMPWVPLTQSVDDTRRFIGEGQRLWAERRSCRCGIVES--GCLVGVIDLH 84 Query: 99 HIDWETRCFEAGYWLRTTCTGKGYITEAVNGITRFAIQELAANRIEIRCSGLNTRSAAVA 158 ++R GYWL + G+G + A+ R+ IRCS N RS A Sbjct: 85 DFTEDSRSASIGYWLAASAQGRGLLARALGKTIELGFLGYDRQRLVIRCSTENLRSQRAA 144 Query: 159 ERAGFLLDGTLRLNTLGLDGEMHDSKVYAKVR 190 ER GF DG +R N + + G HD +Y +R Sbjct: 145 ERQGFRRDGVIRANEI-IAGRAHDHAIYTLLR 175 >BS_ydaF [J] COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins Length = 183 Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 50/173 (28%), Positives = 87/173 (50%), Gaps = 4/173 (2%) Query: 19 TERLLVRAPQWGDGRAVNEAIRESLEELKPWMPFAQSMPALEE-SEIYVRDSRLKFLNRT 77 E + +R + D + E I ++ + L W+ FA++ + + E + D R ++ + Sbjct: 7 NEHITIRLLEPKDAERLAELIIQNQQRLGKWLFFAENPSSADTYRETIIPDWRRQYADLN 66 Query: 78 VLNMLIFHKTEGTFLGCTGLHHIDWETRCFEAGYWLRTTCTGKGYITEAVNGITRFAIQE 137 + + + +G+ G LH++D R E GYW+ GKG IT A + +A +E Sbjct: 67 GIEAGLLY--DGSLCGMISLHNLDQVNRKAEIGYWIAKEFEGKGIITAACRKLITYAFEE 124 Query: 138 LAANRIEIRCSGLNTRSAAVAERAGFLLDGTLRLNTLGLDGEMHDSKVYAKVR 190 L NR+ I + N +S AV ER GFL +G R + L ++G HD Y+ ++ Sbjct: 125 LELNRVAICAAVGNEKSRAVPERIGFLEEGKAR-DGLYVNGMHHDLVYYSLLK 176 >PA1472 [J] COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins Length = 184 Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 85/176 (48%), Gaps = 4/176 (2%) Query: 11 FDFPEFFETERLLVRAPQWGDGRAVNEAIRESLEELKPWMPFAQSMPALEESEIYVRDSR 70 F FP +T RL +R + D + A+ E ++ W + PA + E +RDS+ Sbjct: 3 FVFPHPLDTPRLRLRTFREEDAAPLF-AMMSDPEVMRYWNTPPWTTPA-QAREAILRDSQ 60 Query: 71 LKFLNRTVLNMLIFHKTEGTFLGCTGLHHIDWETRCFEAGYWLRTTCTGKGYITEAVNGI 130 ++ LN+ I + +G LG L H + +R E GY L G+GY+ EA+ + Sbjct: 61 -ALVDGEYLNLAIERREDGQLLGSCILFHFEKGSRRAELGYCLARAAQGRGYMGEALRRL 119 Query: 131 TRFAIQELAANRIEIRCSGLNTRSAAVAERAGFLLDGTLRLNTLGLDGEMHDSKVY 186 FA E+ NR+E N SAA ER GF +G L + + GE+ DS +Y Sbjct: 120 LAFAFDEIDLNRLEAEIDPRNRPSAASLERLGFRQEGLLAQRWI-VSGEVSDSALY 174 >mll7514 [J] COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins Length = 301 Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 10/169 (5%), Positives = 27/169 (15%), Gaps = 5/169 (2%) Query: 24 VRAPQWGDGRAVNEAIRESLEELKPWMPFAQSMPALEESEIYVRDSRLK--FLNRTVLNM 81 + + + ++ L Sbjct: 21 KSTLLNKLLGQKISITSRKAQTTRHRIV-GIHTEGAYQAIYVDTPGLHMEEKRAINRLMN 79 Query: 82 LIFHKTEGTFLGCTGLHHI-DWETRCFEAGYWLRTTCTGKGYITEAVNGITRFAIQELAA 140 + G + W LR V+ + A Sbjct: 80 KAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVNKVDNVQEKADLLPHL 139 Query: 141 NRIEIRCSGLNTRSAAVAERAGFLLDGTLRLNTLGLDGEMHDSKVYAKV 189 + + + L+ + + + H + Y Sbjct: 140 QFLASQMNFLDIVPISAETGLNVDTIAAIV-RKHLPEATHHFPEDYITD 187 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.323 0.139 0.428 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 13,794,809 Number of extensions: 539354 Number of successful extensions: 965 Number of sequences better than 1.0e-05: 22 Number of HSP's gapped: 963 Number of HSP's successfully gapped: 22 Length of query: 194 Length of database: 38,378,431 Length adjustment: 101 Effective length of query: 93 Effective length of database: 26,729,697 Effective search space: 2485861821 Effective search space used: 2485861821 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 113 (48.1 bits)