BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0305.0026.p
         (320 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

STM0077 [C] COG0644 Dehydrogenases (flavoproteins)                    140   3e-33
TM0077 [Q] COG3458 Acetyl esterase (deacetylase)                      140   3e-33
TM0435 [Q] COG3458 Acetyl esterase (deacetylase)                       57   4e-08

>STM0077 [C] COG0644 Dehydrogenases (flavoproteins)
          Length = 428

 Score =  140 bits (353), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 18/305 (5%), Positives = 44/305 (14%), Gaps = 15/305 (4%)

Query: 7   LTQLKAYEGSSPKPADFDSFWERALRDLDAQTLDYELLPAEFTSELAECFHLYFTGVGGA 66
              + A    S           + L      +   + +        +    +        
Sbjct: 8   AIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLERIIPGFADQAP 67

Query: 67  KVHCKYVRPKKAEQAKGPGVVMFHGYSCDSG---DWMEKVAYAAHGISVLAMDCRGQGG- 122
                      A       + + +    D+          +          M+   + G 
Sbjct: 68  IERMITHEKL-AFMTDNGAMTIDYCNGEDASASQVSY---SVLRSKFDAWLMEQAEEAGA 123

Query: 123 -LSEDNLKV-QGTTXXXXXXXXXXXXXXXKLYY-RNVFLDTAQTARILMNMPEVDSERAG 179
            L                                    +++    ++ M      S  A 
Sbjct: 124 QLITGIRVDNVVQRDGKVVGVEADGDILEAKVVILADGVNSLLAEKLGMTKRVEASHVAV 183

Query: 180 AFGLSQGGALTVACAALEPRIRLAVPVYPFLSDYKRAWELDITTSAYEEINYYFRFFDPH 239
                      V     + +           +               E            
Sbjct: 184 GVKELIELPKLVIEDRFQLQGNEGAACLFAGAPTDGLMGG-GFLYTNETTL---SLGLVC 239

Query: 240 HEREEAIFNRLGYIDIQNLAGRIRAKVLWVTGLADTICPPSTQFAAYNKITATKELMVYH 299
                    +     +++         L   G            A  N         V  
Sbjct: 240 GLHHLKDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYAAHVVPEAGMNMQPELVGDGVLI 299

Query: 300 EYGHE 304
                
Sbjct: 300 AGDAA 304


>TM0077 [Q] COG3458 Acetyl esterase (deacetylase)
          Length = 325

 Score =  140 bits (353), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 139/305 (45%), Gaps = 15/305 (4%)

Query: 7   LTQLKAYEGSSPKPADFDSFWERALRDLDAQTLDYELLPAEFTSELAECFHLYFTGVGGA 66
           L +LK Y     +  DFD FWE  L + +   LD      E   +  E + + F+G  G 
Sbjct: 8   LEELKKYRPERYEEKDFDEFWEETLAESEKFPLDPVFERMESHLKTVEAYDVTFSGYRGQ 67

Query: 67  KVHCKYVRPKKAEQAKGPGVVMFHGYSCDSG---DWMEKVAYAAHGISVLAMDCRGQGG- 122
           ++    + PK  E+ K P VV + GY+   G   DW+    + + G     MD RGQG  
Sbjct: 68  RIKGWLLVPK-LEEEKLPCVVQYIGYNGGRGFPHDWL---FWPSMGYICFVMDTRGQGSG 123

Query: 123 -LSEDNLKV-QGTTXXXXXXXXXXXXXXXKLYY-RNVFLDTAQTARILMNMPEVDSERAG 179
            L  D     +G                 + YY R VF D  +      + P+VD ER  
Sbjct: 124 WLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIV 183

Query: 180 AFGLSQGGALTVACAALEPRIRLAVPVYPFLSDYKRAWELDITTSAYEEINYYFRFFDPH 239
             G SQGG + +A +AL  + +  +   PFL  ++RA +L + T  Y EI     F   H
Sbjct: 184 IAGGSQGGGIALAVSALSKKAKALLCDVPFLCHFRRAVQL-VDTHPYAEIT---NFLKTH 239

Query: 240 HEREEAIFNRLGYIDIQNLAGRIRAKVLWVTGLADTICPPSTQFAAYNKITATKELMVYH 299
            ++EE +F  L Y D  N A R +   L+  GL D ICPPST FAAYN     KE+ +Y 
Sbjct: 240 RDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAGPKEIRIYP 299

Query: 300 EYGHE 304
              HE
Sbjct: 300 YNNHE 304


>TM0435 [Q] COG3458 Acetyl esterase (deacetylase)
          Length = 301

 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 4/115 (3%), Positives = 16/115 (13%)

Query: 7   LTQLKAYEGSSPKPADFDSFWERALRDLDAQTLDYELLPAEFTSELAECFHLYFTGVGGA 66
              +      +   +   +        + ++                    +Y    G  
Sbjct: 8   CGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLH 67

Query: 67  KVHCKYVRPKKAEQAKGPGVVMFHGYSCDSGDWMEKVAYAAHGISVLAMDCRGQG 121
               + +     + A      +        G                        
Sbjct: 68  MEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILA 122


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.321    0.136    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 22,733,502
Number of extensions: 948445
Number of successful extensions: 1570
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 1564
Number of HSP's successfully gapped: 3
Length of query: 320
Length of database: 38,378,431
Length adjustment: 106
Effective length of query: 214
Effective length of database: 26,153,027
Effective search space: 5596747778
Effective search space used: 5596747778
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 116 (49.3 bits)