BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0303.0019.p (387 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BH1087 [G] COG0448 ADP-glucose pyrophosphorylase 486 e-137 CAC2237 [G] COG0448 ADP-glucose pyrophosphorylase 468 e-132 BS_glgC [G] COG0448 ADP-glucose pyrophosphorylase 461 e-130 FN0855 [G] COG0448 ADP-glucose pyrophosphorylase 457 e-128 TM0240 [G] COG0448 ADP-glucose pyrophosphorylase 417 e-116 >BH1087 [G] COG0448 ADP-glucose pyrophosphorylase Length = 383 Score = 486 bits (1251), Expect = e-137, Method: Compositional matrix adjust. Identities = 230/382 (60%), Positives = 290/382 (75%), Gaps = 2/382 (0%) Query: 3 KKEMVAMLLAGGQGKRLKGLTKSLAKPAVYFGGTYRIIDFPLSNCSNSGIDTVGVLTQYE 62 KKE+V MLLAGG+GKRL LT+ LAKPAVYFGG YRIIDFPLSNC+NSGIDTVGVLTQYE Sbjct: 2 KKEIVGMLLAGGEGKRLGQLTRKLAKPAVYFGGKYRIIDFPLSNCTNSGIDTVGVLTQYE 61 Query: 63 PLVLHSYIGVGSDWDLNRKDGGVFVLPPHERENGSSWYRGTADAIYRNLKFVDQFDPEHV 122 PL L+ +IG+GS WDL+R+ GGV VLPP+ + G SWY+GTADAIY+N +++Q+DPE+V Sbjct: 62 PLALNGHIGIGSPWDLDRRHGGVTVLPPYIEKQGGSWYKGTADAIYQNRYYIEQYDPEYV 121 Query: 123 LILSGDHIYKMDYHAMLQYHKARNADCTISVIDVPLEEASRFGILNTEEDLKIYEFDEKP 182 LILSGDHIYKMDY M+ +HK AD TISVI+VP EEASRFGI+NT E++ I +F+EKP Sbjct: 122 LILSGDHIYKMDYDRMISHHKKLGADATISVIEVPWEEASRFGIMNTNEEMTITQFEEKP 181 Query: 183 AKPKSTLASMGVYIFKWEVLRKHLLEDGENSGSSHDFGKDIIPLMLADGQSLYAYPFEGY 242 P S LASMG+YIF W VL+ +L++D + + SSHDFGKDIIP MLA L AYPFEGY Sbjct: 182 TTPISNLASMGIYIFNWSVLKSYLIQDAKQANSSHDFGKDIIPKMLAKDLKLVAYPFEGY 241 Query: 243 WRDVGTVASLWEANMDLLSDTPPLNLNDPDWRIFTRNPNQPAQYVAPGAKVSGCIINEGC 302 W+DVGT+ S WEANMDLL + L LNDP WRI++ N NQP QY++ A V ++NEGC Sbjct: 242 WKDVGTIKSYWEANMDLLDEHSSLMLNDPSWRIYSVNRNQPPQYISTRAYVRCSLVNEGC 301 Query: 303 IVHGEVKHSVLFYGVEVGEGSVITDSVIMPKVKIGKNVKIHKAIISENTVIEDYMEIGIE 362 +VHG V+ S+LF GV +G S + +SV+MP VK+G+NV + + II E I + Sbjct: 302 VVHGNVEQSILFPGVHIGANSSVFESVLMPNVKVGENVVLRRTIIMEGACIPSGTHLA-- 359 Query: 363 RENEDEILLIDNRSKKRQSVAA 384 + D+IL+ID ++ S+AA Sbjct: 360 PSDPDDILVIDKDTEFSPSIAA 381 >CAC2237 [G] COG0448 ADP-glucose pyrophosphorylase Length = 380 Score = 468 bits (1205), Expect = e-132, Method: Compositional matrix adjust. Identities = 223/382 (58%), Positives = 288/382 (75%), Gaps = 4/382 (1%) Query: 1 MKKKEMVAMLLAGGQGKRLKGLTKSLAKPAVYFGGTYRIIDFPLSNCSNSGIDTVGVLTQ 60 M KKE++AM+LAGGQG RL LT+ AKPAV FGG YRIIDF LSNCSNSGIDTVGVLTQ Sbjct: 1 MSKKEIIAMILAGGQGSRLGILTRRTAKPAVPFGGKYRIIDFTLSNCSNSGIDTVGVLTQ 60 Query: 61 YEPLVLHSYIGVGSDWDLNRKDGGVFVLPPHERENGSSWYRGTADAIYRNLKFVDQFDPE 120 Y+PL L+S+IG+GS WDL+R GGV VLPP+ +E G +WY+GTA+AIY+N F++ +DPE Sbjct: 61 YKPLALNSHIGIGSPWDLDRTSGGVSVLPPYMKETGGNWYKGTANAIYQNRHFIENYDPE 120 Query: 121 HVLILSGDHIYKMDYHAMLQYHKARNADCTISVIDVPLEEASRFGILNTEEDLKIYEFDE 180 +V+ILSGDHIYKM+Y ML +HK +NAD TI+V +VPL EASRFGI+NT+ED +I EF+E Sbjct: 121 YVVILSGDHIYKMNYLEMLDFHKKKNADATIAVFEVPLNEASRFGIMNTDEDDRINEFEE 180 Query: 181 KPAKPKSTLASMGVYIFKWEVLRKHLLEDGENSGSSHDFGKDIIPLMLADGQSLYAYPFE 240 KP KPK+ LASMG+YIF W L++ L ED + S++DFGK+IIP ML + LYAY F Sbjct: 181 KPKKPKNNLASMGIYIFNWRFLKRFLEEDARDESSNNDFGKNIIPNMLNKKRKLYAYRFN 240 Query: 241 GYWRDVGTVASLWEANMDLLSDTPPLNLNDPDWRIFTRNPNQPAQYVAPGAKVSGCIINE 300 GYW+DVGT+ SLWEANMDLL D LN+ DP W+I++ NP P QY+A + V ++ E Sbjct: 241 GYWKDVGTIQSLWEANMDLLDDNNSLNIYDPKWKIYSVNPTMPPQYIACNSDVKRSLVVE 300 Query: 301 GCIVHGEVKHSVLFYGVEVGEGSVITDSVIMPKVKIGKNVKIHKAIISENTVIEDYMEIG 360 GCIV G+V +SVLF GV +G ++IT+SVIMP V +G NV I K+II N ++D + +G Sbjct: 301 GCIVLGKVYNSVLFPGVYIGRDTIITNSVIMPNVIVGNNVIIKKSIIGSNARVDDNVIVG 360 Query: 361 IERENEDEILLIDNRSKKRQSV 382 D I ++ SK ++S+ Sbjct: 361 ----TNDNISVVGAGSKVKESI 378 >BS_glgC [G] COG0448 ADP-glucose pyrophosphorylase Length = 380 Score = 461 bits (1187), Expect = e-130, Method: Compositional matrix adjust. Identities = 223/380 (58%), Positives = 284/380 (74%), Gaps = 1/380 (0%) Query: 3 KKEMVAMLLAGGQGKRLKGLTKSLAKPAVYFGGTYRIIDFPLSNCSNSGIDTVGVLTQYE 62 KK+ VAMLLAGG+G RL GLTK++AKPAV FGG YRIIDF LSNCSNSGIDTVG+LTQY+ Sbjct: 2 KKQCVAMLLAGGKGSRLSGLTKNMAKPAVSFGGKYRIIDFTLSNCSNSGIDTVGILTQYQ 61 Query: 63 PLVLHSYIGVGSDWDLNRKDGGVFVLPPHERENGSSWYRGTADAIYRNLKFVDQFDPEHV 122 PL L+SYIG+GS WDL+R +GGV VLPP+ + WY+GTA +IY NL +++Q+DPE+V Sbjct: 62 PLELNSYIGIGSAWDLDRYNGGVTVLPPYAESSEVKWYKGTASSIYENLNYLNQYDPEYV 121 Query: 123 LILSGDHIYKMDYHAMLQYHKARNADCTISVIDVPLEEASRFGILNTEEDLKIYEFDEKP 182 LILSGDHIYKMDY ML YH + AD TISVI+V EEASRFGI+ D I FDEKP Sbjct: 122 LILSGDHIYKMDYGKMLDYHIEKKADVTISVIEVGWEEASRFGIMKANPDGTITHFDEKP 181 Query: 183 AKPKSTLASMGVYIFKWEVLRKHLLEDGENSGSSHDFGKDIIPLMLADGQSLYAYPFEGY 242 PKS LASMG+YIF W +L+++L D +N SSHDFGKDIIPL+L + + L AYPF+GY Sbjct: 182 KFPKSNLASMGIYIFNWPLLKQYLEMDDQNPYSSHDFGKDIIPLLLEEKKKLSAYPFKGY 241 Query: 243 WRDVGTVASLWEANMDLLSDTPPLNLNDPDWRIFTRNPNQPAQYVAPGAKVSGCIINEGC 302 W+DVGTV SLWEANMDLL + L L + W+I++ NPNQP Q+++ A+V ++NEGC Sbjct: 242 WKDVGTVQSLWEANMDLLKEDSELKLFERKWKIYSVNPNQPPQFISSDAQVQDSLVNEGC 301 Query: 303 IVHGEVKHSVLFYGVEVGEGSVITDSVIMPKVKIGKNVKIHKAIISENTVIEDYMEIGIE 362 +V+G V HSVLF GV VG+ + +T SVIMP V IG++V I AI+ V+ D I E Sbjct: 302 VVYGNVSHSVLFQGVTVGKHTTVTSSVIMPDVTIGEHVVIENAIVPNGMVLPDGAVIRSE 361 Query: 363 RENEDEILLIDNRSKKRQSV 382 ++ E E+LL+ +++ + Sbjct: 362 KDIE-EVLLVSEEFVEKELI 380 >FN0855 [G] COG0448 ADP-glucose pyrophosphorylase Length = 384 Score = 457 bits (1176), Expect = e-128, Method: Compositional matrix adjust. Identities = 215/361 (59%), Positives = 281/361 (77%), Gaps = 1/361 (0%) Query: 1 MKKKEMVAMLLAGGQGKRLKGLTKSLAKPAVYFGGTYRIIDFPLSNCSNSGIDTVGVLTQ 60 MKKK ++AM+LAGGQG RLK LT+ LAKPAV FGG YRIIDF L+NCSNSGIDTVGVLTQ Sbjct: 3 MKKKRIIAMILAGGQGTRLKELTEDLAKPAVAFGGKYRIIDFTLTNCSNSGIDTVGVLTQ 62 Query: 61 YEPLVLHSYIGVGSDWDLNRKDGGVFVLPPHERENGSS-WYRGTADAIYRNLKFVDQFDP 119 YEP +L+++IG GS WDL+R DGGV VL PH R+N WY+GTA+AIY+N+KF++++DP Sbjct: 63 YEPRILNNHIGRGSPWDLDRMDGGVTVLQPHTRKNDEKGWYKGTANAIYQNIKFIEEYDP 122 Query: 120 EHVLILSGDHIYKMDYHAMLQYHKARNADCTISVIDVPLEEASRFGILNTEEDLKIYEFD 179 E+VLILSGDHIYKM+Y MLQ+H ++AD TI V VPL +A FGI+NT++D+ IYEF+ Sbjct: 123 EYVLILSGDHIYKMNYDKMLQFHIQKDADATIGVFKVPLVDAPSFGIMNTKDDMSIYEFE 182 Query: 180 EKPAKPKSTLASMGVYIFKWEVLRKHLLEDGENSGSSHDFGKDIIPLMLADGQSLYAYPF 239 EKP +PKS LASMG+YIF W++L+K+L ED ++ SS+DFGK+IIP ML DG+ ++AYPF Sbjct: 183 EKPKEPKSDLASMGIYIFNWKLLKKYLDEDEKDPNSSNDFGKNIIPNMLNDGKKMFAYPF 242 Query: 240 EGYWRDVGTVASLWEANMDLLSDTPPLNLNDPDWRIFTRNPNQPAQYVAPGAKVSGCIIN 299 +GYWRDVGT+ S W+A+MDLLS+ L+L D WR+ TR Y +K+ +I+ Sbjct: 243 KGYWRDVGTIQSFWDAHMDLLSEDNELDLFDKSWRVNTRQGIYTPSYFTKESKIKNTLID 302 Query: 300 EGCIVHGEVKHSVLFYGVEVGEGSVITDSVIMPKVKIGKNVKIHKAIISENTVIEDYMEI 359 +GCIV GE++HSV+F GV++G+ S I DS+IM +IG NV I KAII+ + I D + I Sbjct: 303 KGCIVEGEIEHSVIFSGVKIGKNSKIIDSIIMADTEIGDNVTIQKAIIANDVKIVDNIVI 362 Query: 360 G 360 G Sbjct: 363 G 363 >TM0240 [G] COG0448 ADP-glucose pyrophosphorylase Length = 423 Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust. Identities = 198/364 (54%), Positives = 272/364 (74%), Gaps = 1/364 (0%) Query: 7 VAMLLAGGQGKRLKGLTKSLAKPAVYFGGTYRIIDFPLSNCSNSGIDTVGVLTQYEPLVL 66 VAM+LAGGQG RL LT+ +AKPAV FGG YR+IDF LSNC NSGI VGVLTQY P VL Sbjct: 5 VAMILAGGQGTRLGVLTERIAKPAVPFGGKYRLIDFTLSNCVNSGIYRVGVLTQYRPHVL 64 Query: 67 HSYIGVGSDWDLNRKDGGVFVLPPHERENGSSWYRGTADAIYRNLKFVDQFDPEHVLILS 126 +IG+G WDL+RKDGGV +LPP+ + S WY+GTA+A+Y+NL+F+++ D E VLILS Sbjct: 65 SKHIGIGRPWDLDRKDGGVEILPPYVGRHESDWYKGTANAVYQNLEFLEENDAELVLILS 124 Query: 127 GDHIYKMDYHAMLQYHKARNADCTISVIDVPLEEASRFGILNTEEDLKIYEFDEKPAKPK 186 GDH+Y M+Y+ ++ YH + AD TI+ ++VP+EEASRFGI+ T+ D +I +F+EKPAKP+ Sbjct: 125 GDHVYAMNYNDLIDYHLLKEADGTIACMEVPIEEASRFGIMITDVDGRIVDFEEKPAKPR 184 Query: 187 STLASMGVYIFKWEVLRKHLLEDGENSGSSHDFGKDIIPLMLADG-QSLYAYPFEGYWRD 245 S LAS+G+Y+F +E L+K L+ED + SSHDFGKD+IP +L + SLYA+ F+GYWRD Sbjct: 185 SNLASLGIYVFNYEFLKKVLIEDENDPNSSHDFGKDVIPRILRENLGSLYAFRFDGYWRD 244 Query: 246 VGTVASLWEANMDLLSDTPPLNLNDPDWRIFTRNPNQPAQYVAPGAKVSGCIINEGCIVH 305 VGT+ S WEAN++L+ PP NL DP+WR FT P YVAPG+KVS +++EG V+ Sbjct: 245 VGTLRSYWEANLELVLPVPPFNLYDPNWRFFTHTEEMPPAYVAPGSKVSTSLVSEGAEVY 304 Query: 306 GEVKHSVLFYGVEVGEGSVITDSVIMPKVKIGKNVKIHKAIISENTVIEDYMEIGIEREN 365 G V +SV+F GV++G G+V+ +SVIM + +IG+N + II+EN I + +G+ + Sbjct: 305 GNVFNSVIFQGVKIGRGTVVKNSVIMTRTEIGENCYLENVIIAENVKIGSNVRMGVGEDA 364 Query: 366 EDEI 369 E ++ Sbjct: 365 ESKL 368 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.318 0.137 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 30,657,457 Number of extensions: 1385433 Number of successful extensions: 2874 Number of sequences better than 1.0e-05: 72 Number of HSP's gapped: 2726 Number of HSP's successfully gapped: 74 Length of query: 387 Length of database: 38,378,431 Length adjustment: 108 Effective length of query: 279 Effective length of database: 25,922,359 Effective search space: 7232338161 Effective search space used: 7232338161 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 117 (49.7 bits)