BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0303.0007.p (423 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CAC1849 [R] COG2081 Predicted flavoproteins 300 3e-81 CAC3590 [R] COG2081 Predicted flavoproteins 201 3e-51 SMc00763 [R] COG2081 Predicted flavoproteins 189 6e-48 CC1477 [R] COG2081 Predicted flavoproteins 182 9e-46 PA0559 [R] COG2081 Predicted flavoproteins 175 1e-43 >CAC1849 [R] COG2081 Predicted flavoproteins Length = 393 Score = 300 bits (769), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 152/391 (38%), Positives = 243/391 (62%), Gaps = 11/391 (2%) Query: 30 VLLVDKGSRLGRKLGISGGGRCNVTNAKETAELISHIPGNGRFLYSAFDHFNNLDIIRFF 89 V+L+++ +LG+KL I+G GRCN+TN+ E +IPGN FLYS+ F N D++ F Sbjct: 13 VILIERNEKLGKKLFITGKGRCNITNSISIDEFFENIPGNPYFLYSSLYSFTNNDLMDFI 72 Query: 90 ENLGIALKEEDNGRMFPVSDKASSVVSALIGKVRSLGVQMITDSPVAEVLYGNGSVKGVR 149 E LG+ LK E GR+FP SDK+S ++ AL +++ V++I +S V + NG +K V Sbjct: 73 EGLGVKLKVERGGRVFPKSDKSSDIILALERELKKRNVKVILNSRVVSIKLENGVIKSVT 132 Query: 150 LTTGRTLSASAVVIATGGKSVPQTGSTGDGYPWAEAAGHTITELFPTEVPILSREGWIKS 209 + ++ TGGKS PQTGSTGDGY +A GH I E P+ VPI RE +I Sbjct: 133 TSNNECFKGDFFILCTGGKSYPQTGSTGDGYNFARDMGHNIVEPRPSLVPIEIRESFI-- 190 Query: 210 GELQGLSLRDVTLTVWNPKGKRVIAHR-GDMIFTHFGLSGPIALRCSQFLRQVQRKSGTD 268 +LQGLSL++V+L + KGK+V+ G+M+FTH+G+SGPI L S+ + + Sbjct: 191 SDLQGLSLKNVSLYI--KKGKKVLYDNFGEMLFTHYGISGPIVLSASRVVNY------NN 242 Query: 269 TVELSIDLFPDLNPQEMEEQLQNKLELEPKKALRNSLKGLLLERMIPLLLAKAELDGDTT 328 ++ IDL P L+ +E+++++Q K +N+L LL +++IP+++ ++++ D Sbjct: 243 DLKAVIDLKPALDEKELDKRIQKDFMKYINKDFKNALDDLLPQKLIPVIIKLSKIEEDKK 302 Query: 329 GHHLPKSGLQALAALLKRLPVQVYGTRSLEEAFVTGGGVNLKEINPRTMESKLMPGLFFC 388 + + K + + L+K + + G R + EA +T GGV++KEI+P T++SK + L+FC Sbjct: 303 VNLITKEERKKIVNLIKEFTITIKGLRPITEAIITAGGVDVKEIDPSTLKSKKVSNLYFC 362 Query: 389 GEILDIHGYTGGYNITAAFSTGYTAGKHAAE 419 GEI+D+ YTGG+N+ A ST + AG++ + Sbjct: 363 GEIVDVDAYTGGFNLQIAMSTAHEAGRNIGD 393 >CAC3590 [R] COG2081 Predicted flavoproteins Length = 405 Score = 201 bits (510), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 130/411 (31%), Positives = 218/411 (53%), Gaps = 12/411 (2%) Query: 7 VIIIGGGPSGLMXXXXXXXXXXXVLLVDKGSRLGRKLGISGGGRCNVTNAKETAELISHI 66 VI+IGGG SG+M V ++++ R+G+K+ +G GRCN+TN E + Sbjct: 3 VIVIGGGASGIMAAISAKDLGYEVSILERNDRIGKKILTTGNGRCNITN--ENIITKRYH 60 Query: 67 PGNGRFLYSAFDHFNNLDIIRFFENLGIALKEEDNGRMFPVSDKASSVVSALIGKVRSLG 126 N F + F + I FFE LG+ L + G+M+P+S +ASSV+ L + Sbjct: 61 SNNPNFFEHVINEFTAENTISFFEMLGLPLISLEGGKMYPLSLQASSVLDILRIALDERD 120 Query: 127 VQMITDSPVAEVLYGNGSVKGVRLTTGRTLSASAVVIATGGKSVPQTGSTGDGYPWAEAA 186 +++IT+S + +++ S K + + G A V++A GG S P+TGS G G A + Sbjct: 121 IEVITNSKITKIIRNKSSFKIIS-SDGAEYFADKVILAAGGMSAPKTGSDGLGMTLAASL 179 Query: 187 GHTITELFPTEVPILSREGWIKSGELQGLSLRDVTLTVWNPKGKRVIAHRGDMIFTHFGL 246 GH + + P V + +++ L G+ + + + KR G+++FT +G+ Sbjct: 180 GHRLIKTVPALVQLKLDFKSLRA--LSGIKFDGNIKILVDGEEKR--CEFGEILFTDYGI 235 Query: 247 SGPIALRCSQFLR-QVQRKSGTDTVELSIDLFPDLNPQEMEEQLQNKLELEPKKALRNSL 305 SGP L+ S+ V+ K V++ +D+ P + ++ L+N +++ +S Sbjct: 236 SGPPILQLSRIASYAVEEKK---EVKIEVDMLPHYSRDSLKAFLENHWGTFSYRSVYDSF 292 Query: 306 KGLLLERMIPLLLAKAEL-DGDTTGHHLPKSGLQALAALLKRLPVQVYGTRSLEEAFVTG 364 G++ ++MIP+LL + + D L + + LK +V GT S + VT Sbjct: 293 IGIINKKMIPILLKQCGIIDIHKYCFDLTWEEKENIFNYLKCWSFKVCGTNSYSNSQVTA 352 Query: 365 GGVNLKEINPRTMESKLMPGLFFCGEILDIHGYTGGYNITAAFSTGYTAGK 415 GGV+ E+N T+ESKL+PGL+FCGE+LD+ G GG+N+ A+S+GY AGK Sbjct: 353 GGVDTVEVNNITLESKLVPGLYFCGEVLDVDGDCGGFNLQWAWSSGYIAGK 403 >SMc00763 [R] COG2081 Predicted flavoproteins Length = 394 Score = 189 bits (481), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 131/417 (31%), Positives = 215/417 (51%), Gaps = 27/417 (6%) Query: 1 MSGNYDVIIIGGGPSGLMXXXXXXXXXXXVLLVDKGSRLGRKLGISGGGRCNVTNAKETA 60 M+ DV+IIG G +G+M VL++D G K+ ISGGGRCN TN + Sbjct: 1 MAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASP 60 Query: 61 ELISHIPGNGRFLYSAFDHFNNLDIIRFFENLGIALKEEDNGRMFPVSDKASSVVSALIG 120 + + GN F SA + D + E GI E+ G++F A ++ L+ Sbjct: 61 R--NFLSGNPHFCKSALARYRPQDFVALVERHGIGWHEKTLGQLF-CDHSAKDIIRMLMA 117 Query: 121 KVRSLGVQMITDSPVAEVLYGNGSVKGVRLTTGR-TLSASAVVIATGGKSVPQTGSTGDG 179 +++ GVQ+ ++ + EV + G R+TT T+ A+++V+A+GGKS+P+ G+TG Sbjct: 118 EMKEAGVQLRLETSIGEV---ERTASGFRVTTSAGTVDAASLVVASGGKSIPKMGATGLA 174 Query: 180 YPWAEAAGHTITELFPTEVPI-LSREGWIKSGELQGLSLRDVTLTVWNPKGKRVIAHRGD 238 Y AE G + E P VP+ L + K G L G++ D GK A R Sbjct: 175 YRIAEQFGLPVVETRPALVPLTLDQAQLAKLGALAGVAA-DAEARF----GK--AAFREA 227 Query: 239 MIFTHFGLSGPIALRCSQFLRQVQRKSGTDTVELSIDLFPDLNPQEMEEQLQNKLELEPK 298 ++ TH GLSGP L+ S + R+ + E+ + L PD++ + L+ + Sbjct: 228 VLITHRGLSGPAILQISSYWREGE--------EIVLRLMPDIDIASI---LKGMRRANGR 276 Query: 299 KALRNSLKGLLLERMIPLLLAKAELDGDTTGHHLPKSGLQALAALLKRLPVQVYGTRSLE 358 +A++ +L +L R+ +A+L G L + ALA+ ++ V+ G+ Sbjct: 277 QAVQTALADILPRRLAQFFADEAKLTGRMLAD-LSDKTIDALASSIQVWAVKPAGSEGYR 335 Query: 359 EAFVTGGGVNLKEINPRTMESKLMPGLFFCGEILDIHGYTGGYNITAAFSTGYTAGK 415 A VT GGV+ + ++ RTM++K +PGL+F GE +D+ G+ GGYN A+++G+ AG+ Sbjct: 336 TAEVTLGGVDTRALDSRTMQAKEVPGLYFVGECVDVTGWLGGYNFQWAWASGFVAGQ 392 >CC1477 [R] COG2081 Predicted flavoproteins Length = 393 Score = 182 bits (462), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 127/413 (30%), Positives = 210/413 (50%), Gaps = 25/413 (6%) Query: 4 NYDVIIIGGGPSGLMXXXXXXXXXXXVLLVDKGSRLGRKLGISGGGRCNVTNAKETAELI 63 +DV++IG G +G+M VL++D G K+ ISGGGRCN TN A + Sbjct: 3 TFDVVVIGAGAAGMMCAIEAGKRGRSVLVIDHAKAPGEKIRISGGGRCNFTNTG--ASIH 60 Query: 64 SHIPGNGRFLYSAFDHFNNLDIIRFFENLGIALKEEDNGRMFPVSDKASSVVSALIGKVR 123 + + N +F SA + D I E GIA E+ G++F A +++ L+ +++ Sbjct: 61 NFLSANPKFALSALRRYRPRDFIALVERYGIAYHEKTLGQLF-CDGSAKQIITMLLTEMK 119 Query: 124 SLGVQMITDSPVAEVLYGNGSVKGVRLTTGRTLSASAVVIATGGKSVPQTGSTGDGYPWA 183 + GV + ++ V V + V L++G+ AS +V+A+GGKS+P+ G+TG GY A Sbjct: 120 AAGVTLRLETSVESVAKAVSGFE-VSLSSGKVACAS-LVVASGGKSIPKMGATGLGYDIA 177 Query: 184 EAAGHTITELFPTEVPILSREGWI-KSGELQGLSLRDVTLTVWNPKGKRVIAHRGDMIFT 242 + G I E P VP+ G + + L G++L V G + M+FT Sbjct: 178 KQFGLNIIETRPALVPLTFEAGMLARLTPLSGVALDAVV-------GHGKTKFQEGMLFT 230 Query: 243 HFGLSGPIALRCSQFLRQVQRKSGTDTVELSIDLFPDLNPQEMEEQLQNKLELEPKKALR 302 H GLSGP L+ S + R+ E+ +D+ P ++ L+ P++A+ Sbjct: 231 HRGLSGPSILQISSYWREGD--------EIRVDMAPGVDALA---ALKTARTATPRQAVA 279 Query: 303 NSLKGLLLERMIPLLLAKAELDGDTTGHHLPKSGLQALAALLKRLPVQVYGTRSLEEAFV 362 L LL +R+ ++ + D K L LA+ + + G+ A V Sbjct: 280 TVLATLLPKRVAQVIAEEEAPDKGNIADCSDKV-LGRLASAVNAWTFKPVGSEGYRTAEV 338 Query: 363 TGGGVNLKEINPRTMESKLMPGLFFCGEILDIHGYTGGYNITAAFSTGYTAGK 415 T GGV+ + ++ RT+E+K +PGLFF GE++D+ G+ GGYN A+++G++AG+ Sbjct: 339 TLGGVDTEALDSRTLEAKAVPGLFFIGEVVDVTGWLGGYNFQWAWASGWSAGQ 391 >PA0559 [R] COG2081 Predicted flavoproteins Length = 392 Score = 175 bits (444), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 134/418 (32%), Positives = 208/418 (49%), Gaps = 36/418 (8%) Query: 6 DVIIIGGGPSGLMXXXXXXXXXXXVLLVDKGSRLGRKLGISGGGRCNVTN-AKETAELIS 64 DV+I+G G +GLM V ++D ++ G+K+ +SGGGRCN TN E A +S Sbjct: 5 DVLIVGAGAAGLMCAMTAAGRGRRVRVLDHANKAGKKILMSGGGRCNFTNLYTEPANFLS 64 Query: 65 HIPGNGRFLYSAFDHFNNLDIIRFFENLGIALKEEDNGRMFPVSDKASSVVSALIGKVRS 124 P F SA + D I + E+ G++F +K+S ++ L+ + Sbjct: 65 RNP---HFCKSALARYTQWDFIGLVAKHQVPYHEKKLGQLF-CDNKSSDILEMLLRECAE 120 Query: 125 LGVQMITDSPVAEVLYGNGSVKGVRL-TTGRTLSASAVVIATGGKSVPQTGSTGDGYPWA 183 G +++ D+ + E+ + G RL T+ + ++VIA+GG S+P G++G GY A Sbjct: 121 AGAEILLDTSIEEIARDDA---GYRLRTSAGEMRCESLVIASGGLSIPTLGASGFGYQVA 177 Query: 184 EAAGHTITELFPTE---VPILSREGWIK-SGELQGLSLRDVTLTVWNPKGKRVIAHRGDM 239 GH E+ PT VP + + EL G S+ D ++ G+ A R ++ Sbjct: 178 RQFGH---EVLPTRAGLVPFTITDQLKELCAELSGTSV-DCRVSC---NGQ---AFRENL 227 Query: 240 IFTHFGLSGPIALRCSQFLRQVQRKSGTDTVELSIDLFPDLNPQEMEEQLQNKLELEPKK 299 +FTH GLSGP L+ S + + DT+E IDL PD + E Q Q + P Sbjct: 228 LFTHRGLSGPAMLQISSYWQP------GDTLE--IDLLPDHDASEWLAQQQRE---RPNS 276 Query: 300 ALRNSLKGLLLERMIPLLLAKAELDGDTTGHHLPKSGLQALAALLKRLPVQVYGTRSLEE 359 L+ L L +++ LL A + P L +A L V GT Sbjct: 277 ELKTLLAELFTKKLAGLL-ADRWFVSKPMKQYTPTE-LAGIAGQLSAWRVTPSGTEGYRT 334 Query: 360 AFVTGGGVNLKEINPRTMESKLMPGLFFCGEILDIHGYTGGYNITAAFSTGYTAGKHA 417 A VT GGV+ E++ +TMES+ PGL+F GE+LD+ G+ GG+N A+++GY AG++A Sbjct: 335 AEVTLGGVSTDEVSSKTMESQRSPGLYFVGEVLDVSGHLGGFNFQWAWASGYAAGQYA 392 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.317 0.137 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 32,751,248 Number of extensions: 1433832 Number of successful extensions: 3865 Number of sequences better than 1.0e-05: 15 Number of HSP's gapped: 3826 Number of HSP's successfully gapped: 15 Length of query: 423 Length of database: 38,378,431 Length adjustment: 109 Effective length of query: 314 Effective length of database: 25,807,025 Effective search space: 8103405850 Effective search space used: 8103405850 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 117 (49.7 bits)