BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0303.0002.p
         (132 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ZacpS [I] COG0736 Phosphopantetheinyl transferase (holo-ACP synt...    70   9e-13
ECs3429 [I] COG0736 Phosphopantetheinyl transferase (holo-ACP sy...    69   2e-12
ZacpS [I] COG0736 Phosphopantetheinyl transferase (holo-ACP synt...    67   7e-12
Z1544 [I] COG0736 Phosphopantetheinyl transferase (holo-ACP synt...    57   6e-09
ECs1284 [I] COG0736 Phosphopantetheinyl transferase (holo-ACP sy...    57   6e-09

>ZacpS [I] COG0736 Phosphopantetheinyl transferase (holo-ACP synthase)
          Length = 126

 Score = 70.1 bits (170), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 7/128 (5%)

Query: 2   IYGIGHDVLEIGRVAGIANGSLGSRFTRRILTAQELVLXXXXXXXXXEFIAGRFSAKEAV 61
           I G+G D++EI R+  +   S G R  RR+L+  E  +          F+A RF+ KEA 
Sbjct: 3   ILGLGTDIVEIARIEAVIARS-GERLARRVLSDNEWEIWKTHHQPV-RFLAKRFAVKEAA 60

Query: 62  VKALGCGIGHTVGFQDIEILPDALGKPVASLSAEAWSRLRLPEQ--EYTIHLTITHSRGL 119
            KA G GI + + F   E+  D LGKP   L  EA   L+  E+     +H+T+   R  
Sbjct: 61  AKAFGTGIRNGLAFNQFEVFNDELGKPRLRLWGEA---LKXAEKLGVANMHVTLADERHY 117

Query: 120 ASAFAVVE 127
           A A  ++E
Sbjct: 118 ACATVIIE 125


>ECs3429 [I] COG0736 Phosphopantetheinyl transferase (holo-ACP synthase)
          Length = 126

 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 7/128 (5%)

Query: 2   IYGIGHDVLEIGRVAGIANGSLGSRFTRRILTAQELVLXXXXXXXXXEFIAGRFSAKEAV 61
           I G+G D++EI R+  +   S G R  RR+L+  E  +          F+A RF+ KEA 
Sbjct: 3   ILGLGTDIVEIARIEAVIARS-GERLARRVLSDNEWEIWKTHHQPV-RFLAKRFAVKEAA 60

Query: 62  VKALGCGIGHTVGFQDIEILPDALGKPVASLSAEAWSRLRLPEQ--EYTIHLTITHSRGL 119
            KA G GI + + F   E+  D LGKP   L  EA   L+L E+     +H+T+   R  
Sbjct: 61  AKAFGTGIRNGLAFNQFEVFNDELGKPRLRLWGEA---LKLAEKLGVANMHVTLADERHY 117

Query: 120 ASAFAVVE 127
           A A  ++E
Sbjct: 118 ACATVIIE 125



 Score = 67.0 bits (162), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 7/128 (5%)

Query: 2   IYGIGHDVLEIGRVAGIANGSLGSRFTRRILTAQELVLXXXXXXXXXEFIAGRFSAKEAV 61
           I G+G D++EI R+  +   S G R  RR+L+  E  +          F+A RF+ KEA 
Sbjct: 3   ILGLGTDIVEIARIEAVIARS-GERLARRVLSDNEWEIWKTHHQPV-RFLAKRFAVKEAA 60

Query: 62  VKALGCGIGHTVGFQDIEILPDALGKPVASLSAEAWSRLRLPEQ--EYTIHLTITHSRGL 119
            KA G GI + + F   E+  D LGKP   L  EA   L+  E+     +H+T+   R  
Sbjct: 61  AKAFGTGIRNGLAFNQFEVFNDELGKPRLRLWGEA---LKXAEKLGVANMHVTLADERHY 117

Query: 120 ASAFAVVE 127
           A A  ++E
Sbjct: 118 ACATVIIE 125


>Z1544 [I] COG0736 Phosphopantetheinyl transferase (holo-ACP synthase)
          Length = 122

 Score = 57.4 bits (137), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 5/123 (4%)

Query: 5   IGHDVLEIGRVA-GIANGSLGSRFTRRILTAQELVLXXXXXXXXXEFIAGRFSAKEAVVK 63
           IG D++EI R+   I NG +   F  R+ T+ E +L         E  +G ++AKEA+VK
Sbjct: 3   IGTDIVEIARITKAIINGEMA--FYERVYTSHERLLINPAEPDY-ERASGFWAAKEALVK 59

Query: 64  ALGCGIGHTVGFQDIEILPDALGKPVASLSAEAWSRLRLPEQEYTIHLTITHSRGLASAF 123
           A+GCG    V FQDIEI  DA   P   +S      + + +      L+I+H R  A A 
Sbjct: 60  AIGCGFRDGVRFQDIEIKHDAAKAPYFVISGR-LQEIFIGQGLQNNSLSISHCRTHAIAT 118

Query: 124 AVV 126
            +V
Sbjct: 119 VIV 121


>ECs1284 [I] COG0736 Phosphopantetheinyl transferase (holo-ACP synthase)
          Length = 122

 Score = 57.4 bits (137), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 5/123 (4%)

Query: 5   IGHDVLEIGRVA-GIANGSLGSRFTRRILTAQELVLXXXXXXXXXEFIAGRFSAKEAVVK 63
           IG D++EI R+   I NG +   F  R+ T+ E +L         E  +G ++AKEA+VK
Sbjct: 3   IGTDIVEIARITKAIINGEMA--FYERVYTSHERLLINPAEPDY-ERASGFWAAKEALVK 59

Query: 64  ALGCGIGHTVGFQDIEILPDALGKPVASLSAEAWSRLRLPEQEYTIHLTITHSRGLASAF 123
           A+GCG    V FQDIEI  DA   P   +S      + + +      L+I+H R  A A 
Sbjct: 60  AIGCGFRDGVRFQDIEIKHDAAKAPYFVISGR-LQEIFIGQGLQNNSLSISHCRTHAIAT 118

Query: 124 AVV 126
            +V
Sbjct: 119 VIV 121


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.323    0.140    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 9,123,072
Number of extensions: 290995
Number of successful extensions: 504
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 504
Number of HSP's successfully gapped: 5
Length of query: 132
Length of database: 38,378,431
Length adjustment: 94
Effective length of query: 38
Effective length of database: 27,537,035
Effective search space: 1046407330
Effective search space used: 1046407330
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 109 (46.6 bits)