BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0284.0020.p
         (816 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BH0413 [G] COG0366 Glycosidases                                        97   1e-19
lin0153_2 [R] COG3979 Uncharacterized protein contain chitin-bin...    71   9e-12
lin2611_2 [R] COG3979 Uncharacterized protein contain chitin-bin...    69   4e-11

>BH0413 [G] COG0366 Glycosidases
          Length = 958

 Score = 96.7 bits (239), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 47/89 (52%), Positives = 57/89 (64%)

Query: 624 TIYYRKGFATPYIHYQPDGEKWTTAPGVAMADSEYNGYSKSTITLGSATGLTAAFNNGSG 683
           TIYY+ G+  P+IHY  +   WTT PGV +  SEY GY K TI     + L AAFNNGSG
Sbjct: 869 TIYYKTGWTHPHIHYSLNQGAWTTLPGVPLTKSEYEGYVKVTIEAEEGSQLRAAFNNGSG 928

Query: 684 MWDNNGGANYKFLAGVSTFINGKITSGFP 712
            WDNN G +Y F +GV T  +G+I SG P
Sbjct: 929 QWDNNQGRDYDFSSGVHTLADGRILSGTP 957


>lin0153_2 [R] COG3979 Uncharacterized protein contain chitin-binding domain
           type 3
          Length = 141

 Score = 70.9 bits (172), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 50/83 (60%)

Query: 533 PTAPGDLXXXXXXXXXXXLSWSASTDNLGVAGYNIYSNGIKISTTQSTNYKVNGLTTGSS 592
           PT P  L           LSW+ASTDN  VAGY +Y NG ++ +   T +  +GLT  ++
Sbjct: 3   PTVPKSLASSNVTDKSVTLSWTASTDNKAVAGYKVYRNGTEVGSVSGTTFTDSGLTAKTA 62

Query: 593 YTFMVKAVDHSGNESSASNTITV 615
           YT+ VKA D +GN S+AS+ +TV
Sbjct: 63  YTYTVKAYDAAGNFSAASSALTV 85


>lin2611_2 [R] COG3979 Uncharacterized protein contain chitin-binding domain
           type 3
          Length = 184

 Score = 68.6 bits (166), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 48/90 (53%)

Query: 529 DKSQPTAPGDLXXXXXXXXXXXLSWSASTDNLGVAGYNIYSNGIKISTTQSTNYKVNGLT 588
           D   PTAP  L           L W ASTDN+ V  Y +Y N  KI+TT ST ++   L 
Sbjct: 1   DNEAPTAPKGLMSHAQTDTTIALCWQASTDNVEVKNYELYRNNTKIATTTSTMFEDTKLA 60

Query: 589 TGSSYTFMVKAVDHSGNESSASNTITVIAK 618
           + +SY++ V AVD SGN S  SN IT   K
Sbjct: 61  SDTSYSYKVYAVDTSGNRSLVSNEITAKTK 90


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.314    0.131    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 64,589,812
Number of extensions: 2858582
Number of successful extensions: 4140
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 4140
Number of HSP's successfully gapped: 3
Length of query: 816
Length of database: 38,378,431
Length adjustment: 115
Effective length of query: 701
Effective length of database: 25,115,021
Effective search space: 17605629721
Effective search space used: 17605629721
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 120 (50.8 bits)