BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0273.0016.p (408 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ZterA.2_2 [R] COG4110 Uncharacterized protein involved in stress... 181 3e-45 ZterA_2 [R] COG4110 Uncharacterized protein involved in stress r... 181 3e-45 BS_yceE [T] COG2310 Uncharacterized proteins involved in stress ... 146 6e-35 CAC1412 [T] COG2310 Uncharacterized proteins involved in stress ... 142 7e-34 BS_yceD [T] COG2310 Uncharacterized proteins involved in stress ... 138 2e-32 >ZterA.2_2 [R] COG4110 Uncharacterized protein involved in stress response Length = 223 Score = 181 bits (458), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 92/202 (45%), Positives = 126/202 (62%), Gaps = 6/202 (2%) Query: 211 LNLNTILLKNRGERISLQKGAESLGEILINLNWYQKKS----SGWFGSKGVDLDLGCLFE 266 ++L+ + L ISL K ++ GEI INLNW++ S +G FGSKG+DLDLG E Sbjct: 24 ISLSKVSLTKEKPAISLTK-RDNFGEIRINLNWHRGSSKSGFAGMFGSKGIDLDLGAFVE 82 Query: 267 LKNGIKGSVQALGESFGSLNRPPYISLDGDDRTGSIATGENLRINGQYLSEISRIVIFAF 326 L++G K +QALG +FG PY+ L GDDRTG ++ GE L ING+ I ++I+AF Sbjct: 83 LQDGYKSVIQALGNAFGDYRDEPYVQLKGDDRTGDVSDGEWLHINGREWKHIREVLIYAF 142 Query: 327 IYEGITNWSEADAIVTIKQQGGPEIEVRLDEHNNNKGMCAIAMIRNQNDETFSVERLVEY 386 IYEG+ +W + D +VTI P IE RL E N + +CAIA + N+N VER+ +Y Sbjct: 143 IYEGVPSWDKTDGVVTIHVPDQPPIETRLTEGENRRTLCAIARLVNENG-AIKVERINQY 201 Query: 387 FSGHQELDQYYHWNLRWEAGSK 408 F G E+D+ + W RW AGSK Sbjct: 202 FKGQDEMDRAFGWGFRWSAGSK 223 >ZterA_2 [R] COG4110 Uncharacterized protein involved in stress response Length = 223 Score = 181 bits (458), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 92/202 (45%), Positives = 126/202 (62%), Gaps = 6/202 (2%) Query: 211 LNLNTILLKNRGERISLQKGAESLGEILINLNWYQKKS----SGWFGSKGVDLDLGCLFE 266 ++L+ + L ISL K ++ GEI INLNW++ S +G FGSKG+DLDLG E Sbjct: 24 ISLSKVSLTKEKPAISLTK-RDNFGEIRINLNWHRGSSKSGFAGMFGSKGIDLDLGAFVE 82 Query: 267 LKNGIKGSVQALGESFGSLNRPPYISLDGDDRTGSIATGENLRINGQYLSEISRIVIFAF 326 L++G K +QALG +FG PY+ L GDDRTG ++ GE L ING+ I ++I+AF Sbjct: 83 LQDGYKSVIQALGNAFGDYRDEPYVQLKGDDRTGDVSDGEWLHINGREWKHIREVLIYAF 142 Query: 327 IYEGITNWSEADAIVTIKQQGGPEIEVRLDEHNNNKGMCAIAMIRNQNDETFSVERLVEY 386 IYEG+ +W + D +VTI P IE RL E N + +CAIA + N+N VER+ +Y Sbjct: 143 IYEGVPSWDKTDGVVTIHVPDQPPIETRLTEGENRRTLCAIARLVNENG-AIKVERINQY 201 Query: 387 FSGHQELDQYYHWNLRWEAGSK 408 F G E+D+ + W RW AGSK Sbjct: 202 FKGQDEMDRAFGWGFRWSAGSK 223 >BS_yceE [T] COG2310 Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Length = 408 Score = 146 bits (369), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 11/167 (6%), Positives = 35/167 (20%), Gaps = 5/167 (2%) Query: 1 MGWHNTR----PEVEVDFSVFLLTPSQTVSKDEDLIFYGNPSTPNQSVAILQSDQRAYTE 56 + P V + S I + + + +D++ Sbjct: 27 GAAFSLVMPFLPLYVEQLGVTGHSALNMWSGIVFSITFLFSAIASPFW-GGLADRKGRKL 85 Query: 57 STDNTQIAVELGQIPADYERIAFTLTIYEGEKRLQNFSLLDDVYVRIVNAADGKELLRYR 116 + + + + + + + I L + + + K Sbjct: 86 MLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALG 145 Query: 117 LGKNFSIETAIVVGEIYRYDNEWKFSAVGSGYAGGLAALCESYGIQV 163 + A++ + + LC + Sbjct: 146 TLSTGGVSGALLGPMAGGLLADSYGLRPVFFITASVLILCFFVTLFC 192 >CAC1412 [T] COG2310 Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Length = 191 Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 69/165 (41%), Positives = 108/165 (65%), Gaps = 5/165 (3%) Query: 1 MGWHNTRPEVEVDF----SVFLLTPSQTVSKDEDLIFYGNPSTPNQSVAILQSDQRAYTE 56 +GW + + DF SVF KD D +FY N P+ ++ L + E Sbjct: 26 LGWDTNKYDGGYDFDLDASVFCCGEDGKAHKDTDFVFYNNLKHPSGAIEHLGDNLTGGGE 85 Query: 57 STDNTQIAVELGQIPADYERIAFTLTIYEGEKRLQNFSLLDDVYVRIVNAADGKELLRYR 116 D+ Q+ ++L ++P + ++IAF++TIY+ E R QNF + + +VRIVN+ + +EL+RY Sbjct: 86 G-DDEQVVIDLEKVPEEIQKIAFSVTIYDPEVRKQNFGQVSNAFVRIVNSDNNEELVRYD 144 Query: 117 LGKNFSIETAIVVGEIYRYDNEWKFSAVGSGYAGGLAALCESYGI 161 LG++FSIETA+VV E+YR + +WKF+A+GSG+ GGLAALC++YG+ Sbjct: 145 LGEDFSIETAVVVAELYRNNGDWKFNAIGSGFQGGLAALCKNYGL 189 >BS_yceD [T] COG2310 Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Length = 173 Score = 138 bits (348), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 0/167 (0%), Positives = 0/167 (0%), Gaps = 5/167 (2%) Query: 1 MGWHNTR----PEVEVDFSVFLLTPSQTVSKDEDLIFYGNPSTPNQSVAILQSDQRAYTE 56 R ++ + + L + + Sbjct: 27 TPDQVERVAESVVSVDSDVECSMSFAIDNQRLAVLNGDAKVTVTLECQ-RCGKPFTHQVY 85 Query: 57 STDNTQIAVELGQIPADYERIAFTLTIYEGEKRLQNFSLLDDVYVRIVNAADGKELLRYR 116 +T Q A E GE L + + V E Sbjct: 86 TTYCFSPVRSDEQAEALPEAYEPIEVNEFGEIDLLAMVEDEIILALPVVPVHDSEHCEVS 145 Query: 117 LGKNFSIETAIVVGEIYRYDNEWKFSAVGSGYAGGLAALCESYGIQV 163 Sbjct: 146 192 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.316 0.135 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 30,624,051 Number of extensions: 1225870 Number of successful extensions: 2769 Number of sequences better than 1.0e-05: 29 Number of HSP's gapped: 2742 Number of HSP's successfully gapped: 29 Length of query: 408 Length of database: 38,378,431 Length adjustment: 109 Effective length of query: 299 Effective length of database: 25,807,025 Effective search space: 7716300475 Effective search space used: 7716300475 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 117 (49.7 bits)