BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0271.0009.p (264 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SP2087 [P] COG1117 ABC-type phosphate transport system, ATPase c... 364 e-101 lin2638 [P] COG1117 ABC-type phosphate transport system, ATPase ... 348 5e-96 BS_yqgK [P] COG1117 ABC-type phosphate transport system, ATPase ... 334 9e-92 VC0726 [P] COG1117 ABC-type phosphate transport system, ATPase c... 330 1e-90 VCA0073 [P] COG1117 ABC-type phosphate transport system, ATPase ... 323 2e-88 >SP2087 [P] COG1117 ABC-type phosphate transport system, ATPase component Length = 250 Score = 364 bits (935), Expect = e-101, Method: Compositional matrix adjust. Identities = 167/245 (68%), Positives = 204/245 (83%) Query: 20 IEKLDLYYESFHALKSVDLQVPEKQVTAFIGPSGCGKSTLLRTLNRMNDMIPGTRIEGKV 79 + LDL+Y F ALK++ +Q+PE+Q+TA IGPSGCGKST L+TLNRMND++P IEG+V Sbjct: 6 VRHLDLFYGDFQALKNISIQLPERQITALIGPSGCGKSTFLKTLNRMNDLVPSCHIEGQV 65 Query: 80 NIGGKNIYSDEVEVESLRKQVGMVFQQPNPFPKSIYDNVAYGPRLHGIRGKAELDVLVEQ 139 + ++IYS + + LRK+VGMVFQQPNPF SIYDNVAYGPR HGIR K +LD LVE+ Sbjct: 66 LLDEQDIYSSKFNLNQLRKRVGMVFQQPNPFAMSIYDNVAYGPRTHGIRDKKQLDALVEK 125 Query: 140 SLRQSALWEEVKDFLKKSALSLSGGQQQRLCIARALAVQPDILLMDEATSALDPVSTLKI 199 SL+ +A+WEEVKD LKKSA+SLSGGQQQRLCIARALAV+PDILLMDE TSALDP+STLKI Sbjct: 126 SLKGAAIWEEVKDDLKKSAMSLSGGQQQRLCIARALAVEPDILLMDEPTSALDPISTLKI 185 Query: 200 EELVQELRDKYTIVMVTHNMHQAARVSGRTVFFLNGVIVEAADTEMLFSNPKDSRTEDYI 259 E+L+Q+L+ YTI++VTHNM QA+R+S +T FFL G I E DT +F+NPKD RTEDYI Sbjct: 186 EDLIQQLKKDYTIIIVTHNMQQASRISDKTAFFLTGEICEFGDTVDVFTNPKDQRTEDYI 245 Query: 260 SGRFG 264 SGRFG Sbjct: 246 SGRFG 250 >lin2638 [P] COG1117 ABC-type phosphate transport system, ATPase component Length = 259 Score = 348 bits (893), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 160/256 (62%), Positives = 206/256 (80%) Query: 9 ETQKLMKSIIDIEKLDLYYESFHALKSVDLQVPEKQVTAFIGPSGCGKSTLLRTLNRMND 68 ET + ++ II+ + +DL+Y S AL+ + L + + QVTA IGPSGCGKST LRTLNRMND Sbjct: 4 ETAEKVEYIIETKDVDLFYGSKQALQKIALNIKKNQVTALIGPSGCGKSTFLRTLNRMND 63 Query: 69 MIPGTRIEGKVNIGGKNIYSDEVEVESLRKQVGMVFQQPNPFPKSIYDNVAYGPRLHGIR 128 +IP + G+++IGG+N+ ++++ +LRK+VGMVFQQ NPFP SIYDNVAYGPR+HGI+ Sbjct: 64 LIPNVKTTGEIHIGGENVQDPKIDMVNLRKKVGMVFQQANPFPFSIYDNVAYGPRMHGIK 123 Query: 129 GKAELDVLVEQSLRQSALWEEVKDFLKKSALSLSGGQQQRLCIARALAVQPDILLMDEAT 188 K LD +VE+SLRQ+ALWEEV D L +SA+ +SGGQQQRLCIAR LAV+PD++LMDE T Sbjct: 124 DKKVLDEIVERSLRQAALWEEVHDRLDRSAIGMSGGQQQRLCIARVLAVKPDVILMDEPT 183 Query: 189 SALDPVSTLKIEELVQELRDKYTIVMVTHNMHQAARVSGRTVFFLNGVIVEAADTEMLFS 248 SALDP+ST K+E+L+ EL+ YTIV+VTHNM QA+R+S T FFLNG IVE ADT +F+ Sbjct: 184 SALDPISTAKVEDLILELKKDYTIVIVTHNMQQASRISDETAFFLNGRIVEFADTTSIFT 243 Query: 249 NPKDSRTEDYISGRFG 264 NP + TEDYISGRFG Sbjct: 244 NPAEKETEDYISGRFG 259 >BS_yqgK [P] COG1117 ABC-type phosphate transport system, ATPase component Length = 260 Score = 334 bits (856), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 157/256 (61%), Positives = 198/256 (77%), Gaps = 1/256 (0%) Query: 10 TQKLMKS-IIDIEKLDLYYESFHALKSVDLQVPEKQVTAFIGPSGCGKSTLLRTLNRMND 68 T+ +MK + + ++L+Y HALK+++L + E +VTA IGPSGCGKST ++TLN M Sbjct: 5 TEAVMKQEVYQVNGMNLWYGQHHALKNINLSIYENEVTAIIGPSGCGKSTFIKTLNLMIQ 64 Query: 69 MIPGTRIEGKVNIGGKNIYSDEVEVESLRKQVGMVFQQPNPFPKSIYDNVAYGPRLHGIR 128 M P ++ G++N G NI D+V++ LRK +GMVFQ+ NPFP+SI+DNVAYGPR+HG + Sbjct: 65 MTPNVKLAGELNYNGSNILKDKVDIVDLRKNIGMVFQKGNPFPQSIFDNVAYGPRVHGTK 124 Query: 129 GKAELDVLVEQSLRQSALWEEVKDFLKKSALSLSGGQQQRLCIARALAVQPDILLMDEAT 188 K +L +VE+SL+ ALW+EVKD L SALSLSGGQQQRLCIARALA PDILLMDE T Sbjct: 125 NKKKLQEIVEKSLKDVALWDEVKDRLHTSALSLSGGQQQRLCIARALATNPDILLMDEPT 184 Query: 189 SALDPVSTLKIEELVQELRDKYTIVMVTHNMHQAARVSGRTVFFLNGVIVEAADTEMLFS 248 SALDP+ST KIEEL+ EL+DKYTIV+VTHNM QAARVS +T FF G +VE +T +FS Sbjct: 185 SALDPISTRKIEELILELKDKYTIVIVTHNMQQAARVSDQTAFFYMGELVECDNTNKMFS 244 Query: 249 NPKDSRTEDYISGRFG 264 NPKD RT DYISG+FG Sbjct: 245 NPKDQRTLDYISGKFG 260 >VC0726 [P] COG1117 ABC-type phosphate transport system, ATPase component Length = 273 Score = 330 bits (846), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 151/250 (60%), Positives = 198/250 (79%) Query: 15 KSIIDIEKLDLYYESFHALKSVDLQVPEKQVTAFIGPSGCGKSTLLRTLNRMNDMIPGTR 74 ++ I IE L LYY+ AL + +++P+ QVTAFIGPSGCGKSTLLR +NRMND++ GTR Sbjct: 24 QTAISIEHLSLYYQQSRALSDISMRIPKGQVTAFIGPSGCGKSTLLRCINRMNDLVEGTR 83 Query: 75 IEGKVNIGGKNIYSDEVEVESLRKQVGMVFQQPNPFPKSIYDNVAYGPRLHGIRGKAELD 134 +EG+V + GKNIY +V+V +LR++VGMVFQ+PNPFPKSIY+NV YG RL GI+ LD Sbjct: 84 VEGEVKLHGKNIYHPDVDVPTLRRRVGMVFQRPNPFPKSIYENVVYGLRLQGIKNSRALD 143 Query: 135 VLVEQSLRQSALWEEVKDFLKKSALSLSGGQQQRLCIARALAVQPDILLMDEATSALDPV 194 EQSLR +ALW+EVK L ++A LSGGQQQRL IARA+A++P++LL+DE TSALDP+ Sbjct: 144 DAAEQSLRAAALWDEVKHRLHENAFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPI 203 Query: 195 STLKIEELVQELRDKYTIVMVTHNMHQAARVSGRTVFFLNGVIVEAADTEMLFSNPKDSR 254 STL IEEL+ +L+ KYT+V+VTHNM QAARVS T F G ++E ADT+ +F++P + Sbjct: 204 STLTIEELIHDLKTKYTVVIVTHNMQQAARVSDHTAFIHMGKLIEYADTDSIFTSPLKKQ 263 Query: 255 TEDYISGRFG 264 TEDYI+GR+G Sbjct: 264 TEDYITGRYG 273 >VCA0073 [P] COG1117 ABC-type phosphate transport system, ATPase component Length = 251 Score = 323 bits (828), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 151/247 (61%), Positives = 195/247 (78%), Gaps = 1/247 (0%) Query: 18 IDIEKLDLYYESFHALKSVDLQVPEKQVTAFIGPSGCGKSTLLRTLNRMNDMIPGTRIEG 77 +IE LDL+Y ALKS++L +P +QVTA IGPSGCGKSTLLR LNRMND+I G I G Sbjct: 6 FNIENLDLFYGENQALKSINLPIPTRQVTALIGPSGCGKSTLLRCLNRMNDLIEGVTITG 65 Query: 78 KVNIGGKNIYSDEVEVESLRKQVGMVFQQPNPFPKSIYDNVAYGPRLHGIRGKAELDVLV 137 K+ + G+++Y + ++V LR +VGMVFQ+PNPFP SIY+NVAYG R GI+ K LD +V Sbjct: 66 KLTMDGQDVYGN-IDVSDLRIRVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKHLDEVV 124 Query: 138 EQSLRQSALWEEVKDFLKKSALSLSGGQQQRLCIARALAVQPDILLMDEATSALDPVSTL 197 E+SLR +ALW+EVKD LK A LSGGQQQRLCIAR +A++PD++LMDE TSALDP++T Sbjct: 125 ERSLRGAALWDEVKDRLKSHAFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATH 184 Query: 198 KIEELVQELRDKYTIVMVTHNMHQAARVSGRTVFFLNGVIVEAADTEMLFSNPKDSRTED 257 KIEEL+++L+ YTIV+VTH+M QA R+S RT FFL G +VE DT+++FSNP+D RT Sbjct: 185 KIEELMEDLKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIFSNPRDDRTRG 244 Query: 258 YISGRFG 264 Y++G FG Sbjct: 245 YVNGDFG 251 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.317 0.135 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 18,415,142 Number of extensions: 676990 Number of successful extensions: 8183 Number of sequences better than 1.0e-05: 2053 Number of HSP's gapped: 5109 Number of HSP's successfully gapped: 2195 Length of query: 264 Length of database: 38,378,431 Length adjustment: 104 Effective length of query: 160 Effective length of database: 26,383,695 Effective search space: 4221391200 Effective search space used: 4221391200 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 115 (48.9 bits)