BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0269.0009.p (507 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z5839 [G] COG1129 ABC-type sugar transport system, ATPase component 493 e-139 VCA0128 [G] COG1129 ABC-type sugar transport system, ATPase comp... 386 e-107 AGc5112 [G] COG1129 ABC-type sugar transport system, ATPase comp... 380 e-105 PM1379 [G] COG1129 ABC-type sugar transport system, ATPase compo... 374 e-103 Z5691 [G] COG1129 ABC-type sugar transport system, ATPase component 374 e-103 >Z5839 [G] COG1129 ABC-type sugar transport system, ATPase component Length = 500 Score = 493 bits (1270), Expect = e-139, Method: Compositional matrix adjust. Identities = 262/501 (52%), Positives = 340/501 (67%), Gaps = 8/501 (1%) Query: 8 QQPILQMTRIHKRFPGVKALTDVSLRLFPGEVHALMGENGAGKSTLIKVLTGVYSIDEGL 67 Q IL+ + K FPGVKAL +V L GE+ AL+GENGAGKSTLIK LTGVY D G Sbjct: 6 HQEILRTEGLSKFFPGVKALDNVDFSLRRGEIMALLGENGAGKSTLIKALTGVYHADRGT 65 Query: 68 VEMEGTAISMRSPQESQAAGISTVYQEVNLCPNLTVAENIFIGREPRRFGCIQWKQMNLR 127 + +EG AIS ++ +Q GI TVYQEVNL PN++VA+N+FIGREP+RFG ++ K+M R Sbjct: 66 IWLEGQAISPKNTAHAQQLGIGTVYQEVNLLPNMSVADNLFIGREPKRFGLLRRKEMEKR 125 Query: 128 AAELLSERMNLHIDVTLPLQSYSVAVQQLVAIARALNISAKVLILDEPTSSLDQNEVDQL 187 A EL++ +DV PL +SVA+QQ+VAI RA+++SAKVLILDEPT+SLD EV+ L Sbjct: 126 ATELMAS-YGFSLDVREPLNRFSVAMQQIVAICRAIDLSAKVLILDEPTASLDTQEVELL 184 Query: 188 FRIMRKLQQEGLSILFVTHFLDQMYEISDRVTILRGGELVGEYMAKELSRLDLVLKMIGK 247 F +MR+L+ G+S++FVTHFLDQ+Y++SDR+T+LR G VG EL +++LV M+G+ Sbjct: 185 FDLMRQLRDRGVSLIFVTHFLDQVYQVSDRITVLRNGSFVGCRETCELPQIELVKMMLGR 244 Query: 248 EL--HLLDELPELAAQDKNSXXXXXXXXXXXXXXXXXXPFDLAIRKGEVVGLAGLLGSGR 305 EL H L DK PFDL +R GE+VGLAGLLGSGR Sbjct: 245 ELDTHALQRAGRTLLSDK-----PVAAFKNYGKKGTIAPFDLEVRPGEIVGLAGLLGSGR 299 Query: 306 TEAARLLFGADKPDFGQVTLPSSGGGVHSPREAIGRRIAFCSENRKTEGVIGDLTVRENI 365 TE A ++FG D G + + SP +A I FC E+RKT+G+I +VRENI Sbjct: 300 TETAEVIFGIKPADSGTALIKGKPQNLRSPHQASVLGIGFCPEDRKTDGIIAAASVRENI 359 Query: 366 ILALQAKDGMFRTIPRKRQEELAGEYIRMLNINPPSPDQLIKNLSGGNQQKVLLARWLLT 425 ILALQA+ G R I RK Q+E+A +IR L I PS +Q I+ LSGGNQQKVLL+RWLLT Sbjct: 360 ILALQARRGWLRPISRKEQQEIAERFIRQLGIRTPSTEQPIEFLSGGNQQKVLLSRWLLT 419 Query: 426 EPELFILDEPTRGIDIGAKAEIQKLVLTLSRQGMSFLFISSELEEVLRVSDRIAILRDRR 485 P+ ILDEPTRGID+GA AEI +L+ TL G++ L ISSELEE++ +DR+ I+RDR+ Sbjct: 420 RPQFLILDEPTRGIDVGAHAEIIRLIETLCADGLALLVISSELEELVGYADRVIIMRDRK 479 Query: 486 KVKEISEKDMSQQQIMQAIAG 506 +V EI ++S IM AIA Sbjct: 480 QVAEIPLAELSVPAIMNAIAA 500 >VCA0128 [G] COG1129 ABC-type sugar transport system, ATPase component Length = 500 Score = 386 bits (992), Expect = e-107, Method: Compositional matrix adjust. Identities = 203/501 (40%), Positives = 323/501 (64%), Gaps = 13/501 (2%) Query: 9 QPILQMTRIHKRFPGVKALTDVSLRLFPGEVHALMGENGAGKSTLIKVLTGVYSIDEGLV 68 Q IL +++I K FPGVKAL SL ++PG V ALMGENGAGKSTL+KVLTG+YS D G + Sbjct: 3 QAILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSI 62 Query: 69 EMEGTAISMRSPQESQAAGISTVYQEVNLCPNLTVAENIFIGRE-PRRFGCIQWKQMNLR 127 E +G +S + P++SQ AGIS ++QE+NL P LT+AENIF+GRE FG I W +M+ + Sbjct: 63 EYQGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMHRK 122 Query: 128 AAELLSERMNLHIDVTLPLQSYSVAVQQLVAIARALNISAKVLILDEPTSSLDQNEVDQL 187 A +LL+ R+N+ L S+ QQ+V IA+AL+ +KV+I+DEPT +L E + L Sbjct: 123 ADQLLA-RLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESL 181 Query: 188 FRIMRKLQQEGLSILFVTHFLDQMYEISDRVTILRGGELVGEYMAKELSRLDLVLKMIGK 247 F ++ +L+++G I++++H L +++EI D +T+LR G+ +GE + + L+ M+G+ Sbjct: 182 FNVINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMVGR 241 Query: 248 ELHLLDELPELAAQDKNSXXXXXXXXXXXXXXXXXXPFDLAIRKGEVVGLAGLLGSGRTE 307 +L ++ P +AAQ + ++KGE++G++GL+G+GRTE Sbjct: 242 KLE--EQYPRIAAQQGD-----ISLEVIGLTGSGVHDVSFTLKKGEILGVSGLMGAGRTE 294 Query: 308 AARLLFGADKPDFGQVTLPSSGGGVHSPREAIGRRIAFCSENRKTEGVIGDLTVRENIIL 367 ++++GA + G + L SP++ + IA+ SE+RK +G++ L+V+EN + Sbjct: 295 LMKVIYGALPSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKEN--M 352 Query: 368 ALQAKDGMFRTIPRKRQEELAG--EYIRMLNINPPSPDQLIKNLSGGNQQKVLLARWLLT 425 +L A D + + + + +E+ ++IR+ NI PS +Q+I NLSGGNQQKV +A+ L+T Sbjct: 353 SLCALDQLSKGVQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMT 412 Query: 426 EPELFILDEPTRGIDIGAKAEIQKLVLTLSRQGMSFLFISSELEEVLRVSDRIAILRDRR 485 +P++ ILDEPTRG+D+GAK EI +L+ +GMS + +SSE+ EVL +SDRI ++ + R Sbjct: 413 KPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGR 472 Query: 486 KVKEISEKDMSQQQIMQAIAG 506 E + Q+++M G Sbjct: 473 ISGEFMASEADQEKLMACAVG 493 Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 68/244 (27%), Positives = 121/244 (49%), Gaps = 39/244 (15%) Query: 26 ALTDVSLRLFPGEVHALMGENGAGKSTLIKVLTGVYSIDEGLVEMEGTAISMRSPQESQA 85 + DVS L GE+ + G GAG++ L+KV+ G + G++ + G ++ SPQ+ A Sbjct: 268 GVHDVSFTLKKGEILGVSGLMGAGRTELMKVIYGALPSERGVINLNGRTVNPVSPQDGLA 327 Query: 86 AGISTVYQEVN---LCPNLTVAENIFIGREPRRFGCIQWKQMNLRAAELLSERMNL-HID 141 GI+ + ++ L L+V EN M+L A + LS+ + + H D Sbjct: 328 NGIAYISEDRKGDGLVLGLSVKEN-----------------MSLCALDQLSKGVQIRHAD 370 Query: 142 VTLPLQSY------------------SVAVQQLVAIARALNISAKVLILDEPTSSLDQNE 183 + + + S QQ VAIA+ L KVLILDEPT +D Sbjct: 371 EVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLILDEPTRGVDVGA 430 Query: 184 VDQLFRIMRKLQQEGLSILFVTHFLDQMYEISDRVTILRGGELVGEYMAKELSRLDLVLK 243 ++++++ + + EG+SI+ V+ + ++ +SDR+ ++ G + GE+MA E + L+ Sbjct: 431 KKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMASEADQEKLMAC 490 Query: 244 MIGK 247 +G+ Sbjct: 491 AVGR 494 >AGc5112 [G] COG1129 ABC-type sugar transport system, ATPase component Length = 154 Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust. Identities = 0/506 (0%), Positives = 0/506 (0%), Gaps = 7/506 (1%) Query: 2 DIALSTQQPILQMTRIHKRFPGVKALTDVSLRLFPGEVHALMGENGAGKSTLIKVLTGVY 61 D + F + L + + Sbjct: 16 DGTGILFTGPSGSGKSELAFSFLTEAERCGLPAALIADDQIFVYRDGETIIAERPEAIAG 75 Query: 62 SIDEGLVEMEGTAISMRSPQESQAAGISTVYQEVNLCPNLTVAENIFIGREPRRFGCIQW 121 ++ + + + + + R Sbjct: 76 LLELRGSGIVSVKSVPSGVLHFAVTTVLSPENPRLPEDDEALLMPCGGHLRLLRIPLSSL 135 Query: 122 KQMNLRAAELLSERMNLHIDVTLPLQSYSVAVQQLVAIARALNISAKVLILDEPTSSLDQ 181 AA Sbjct: 136 VPYGKFAALAQ- 194 Query: 182 NEVDQLFRIMRKLQQEGLSILFVTHFLDQMYEISDRVTILRGGELVGEYMAKELSRLDLV 241 Sbjct: 195 254 Query: 242 LKMIGKELHLLDELPELAAQDKNSXXXXXXXXXXXXXXXXXXPFDLAIRKGEVVGLAGLL 301 Sbjct: 255 ----- 309 Query: 302 GSGRTEAARLLFGADKPDFGQVTLPSSGGGVHSPREAIGRRIAFCSENRKTEGVIGDLTV 361 Sbjct: 310 369 Query: 362 RENIILA-LQAKDGMFRTIPRKRQEELAGEYIRMLNINPPSPDQLIKNLSGGNQQKVLLA 420 Sbjct: 370 429 Query: 421 RWLLTEPELFILDEPTRGIDIGAKAEIQKLVLTLSRQGMSFLFISSELEEVLRVSDRIAI 480 Sbjct: 430 489 Query: 481 LRDRRKVKEISEKDMSQQQIMQAIAG 506 Sbjct: 490 515 >PM1379 [G] COG1129 ABC-type sugar transport system, ATPase component Length = 519 Score = 374 bits (961), Expect = e-103, Method: Compositional matrix adjust. Identities = 195/499 (39%), Positives = 309/499 (61%), Gaps = 7/499 (1%) Query: 9 QPILQMTRIHKRFPGVKALTDVSLRLFPGEVHALMGENGAGKSTLIKVLTGVYSIDEGLV 68 +P+L+M I KRF AL DV L ++ GE+HALMGENGAGKSTL+K+L G Y+ G + Sbjct: 26 RPLLEMKGIAKRFGTFYALQDVDLSIYRGEIHALMGENGAGKSTLMKILAGAYTASAGEI 85 Query: 69 EMEGTAISMRSPQESQAAGISTVYQEVNLCPNLTVAENIFIGREPRRFGCIQWKQMNLRA 128 ++G + SP+++ AGI+ +YQE++L PNLTVAENIF+G E + + K M + Sbjct: 86 LIDGEPFPISSPKDAIKAGITLIYQEIHLSPNLTVAENIFLGCEIKTLFGLDRKTMAEES 145 Query: 129 AELLSERMNLHIDVTLPLQSYSVAVQQLVAIARALNISAKVLILDEPTSSLDQNEVDQLF 188 ++L +R+ T + S ++A QQ V IARAL +++L++DEPT++L E ++LF Sbjct: 146 QKVL-DRLGAQFLATQKVSSLTIAEQQQVEIARALYRKSRILVMDEPTAALSSRETERLF 204 Query: 189 RIMRKLQQEGLSILFVTHFLDQMYEISDRVTILRGGELVGEYMAKELSRLDLVLKMIGKE 248 +++KL+ EG++I++++H + ++YE++DRV++LR G+ VG L LV M+G+ Sbjct: 205 ALVKKLRDEGMAIIYISHRMAEIYELADRVSVLRDGKYVGSLTRDNLDSATLVQMMVGRP 264 Query: 249 LHLLDELPELAAQDKNSXXXXXXXXXXXXXXXXXXPFDLAIRKGEVVGLAGLLGSGRTEA 308 L +L ++K L +R GE+VGL+GL+G+GR+E Sbjct: 265 L------TDLFNKEKVPVGEEVLRVENLSDGHKLKDASLVVRAGEIVGLSGLVGAGRSEL 318 Query: 309 ARLLFGADKPDFGQVTLPSSGGGVHSPREAIGRRIAFCSENRKTEGVIGDLTVRENIILA 368 A LLFG + G++ L SPREAI +A ENRK EG+ DL + +N+ +A Sbjct: 319 AHLLFGVKRATKGKIYLSGGEISFSSPREAIAHHVALLPENRKEEGLFLDLNILKNVTMA 378 Query: 369 LQAKDGMFRTIPRKRQEELAGEYIRMLNINPPSPDQLIKNLSGGNQQKVLLARWLLTEPE 428 +D I + + ++ I L + PS + + LSGGNQQKVLL+RW EP+ Sbjct: 379 TLERDATMLVIDQNKGKQTTQAAIEGLKMRVPSANVNVSGLSGGNQQKVLLSRWAAIEPK 438 Query: 429 LFILDEPTRGIDIGAKAEIQKLVLTLSRQGMSFLFISSELEEVLRVSDRIAILRDRRKVK 488 LFI+DEPTRG+D+GAK+EI ++++ ++++G++ L ISSEL E++ +SDR+ ++R+ V Sbjct: 439 LFIMDEPTRGVDVGAKSEIYRMMIEMAKKGVAILMISSELPEIVGMSDRVYVMREGYTVG 498 Query: 489 EISEKDMSQQQIMQAIAGG 507 E+ D++Q++IM G Sbjct: 499 ELEGDDINQERIMAFACGA 517 >Z5691 [G] COG1129 ABC-type sugar transport system, ATPase component Length = 517 Score = 374 bits (960), Expect = e-103, Method: Compositional matrix adjust. Identities = 190/498 (38%), Positives = 318/498 (63%), Gaps = 8/498 (1%) Query: 10 PILQMTRIHKRFPGVKALTDVSLRLFPGEVHALMGENGAGKSTLIKVLTGVYSIDEGLVE 69 P+L+M I K F AL V L ++PGE+HALMGENGAGKSTL+KVL G Y+ G + Sbjct: 16 PVLEMRNIAKAFGKFYALKGVDLTVYPGEIHALMGENGAGKSTLMKVLAGAYTATSGEIL 75 Query: 70 MEGTAISMRSPQESQAAGISTVYQEVNLCPNLTVAENIFIGREPRRFGCIQWKQMNLRAA 129 ++G +R+P+++ +AGI+ +YQE+ L PNL+VAENIF+G E G +Q K+M ++A Sbjct: 76 IDGKPFHIRTPKDALSAGITLIYQEMQLAPNLSVAENIFLGSELSHGGLVQRKEMLVQAQ 135 Query: 130 ELLSERMNLHIDVTLPLQSYSVAVQQLVAIARALNISAKVLILDEPTSSLDQNEVDQLFR 189 +++ +R+ + + + + ++A QQ V IARAL+ ++++L++DEPT++ E +LF Sbjct: 136 KVI-DRLGAQFNASDKVMTLTIAEQQQVEIARALHRNSRILVMDEPTAAXSSRETHRLFE 194 Query: 190 IMRKLQQEGLSILFVTHFLDQMYEISDRVTILRGGELVGEYMAKELSRLDLVLKMIGKEL 249 ++ +L+ EG++I++++H + ++YE+SDRV++LR G+ VG L+ +LV M+G+ L Sbjct: 195 LIMRLRDEGMAIIYISHRMAEVYELSDRVSVLRDGQYVGSLTRDNLNAGELVRMMVGRPL 254 Query: 250 HLLDELPELAAQDKN-SXXXXXXXXXXXXXXXXXXPFDLAIRKGEVVGLAGLLGSGRTEA 308 +L ++++ P L +R GE+VGLAGL+G+GR+E Sbjct: 255 ------SDLFNKERDIPLGKARLNVHHLTDGGKVQPSSLLVRSGEIVGLAGLVGAGRSEL 308 Query: 309 ARLLFGADKPDFGQVTLPSSGGGVHSPREAIGRRIAFCSENRKTEGVIGDLTVRENIILA 368 A+L+FG K G + + +HSPREAI I F +ENRK +G+ ++ ENI +A Sbjct: 309 AQLIFGVRKATGGMIEVDGEPVVIHSPREAIDLGIGFLTENRKEQGLFLEMAAAENITMA 368 Query: 369 LQAKDGMFRTIPRKRQEELAGEYIRMLNINPPSPDQLIKNLSGGNQQKVLLARWLLTEPE 428 +D + + RK+ + ++ + I++LNI P LSGGNQQK+L++RW+ P Sbjct: 369 TLERDARWGMLNRKKAQTISDDAIKLLNIRVPHAQVRAGGLSGGNQQKLLISRWVAIGPR 428 Query: 429 LFILDEPTRGIDIGAKAEIQKLVLTLSRQGMSFLFISSELEEVLRVSDRIAILRDRRKVK 488 + +LDEP RG+D+GAK+EI +++ ++R+G++ L ISSEL E++ +SDR+ ++R+ Sbjct: 429 ILLLDEPARGVDVGAKSEIYRIMNEMARKGVAILMISSELPEIVGMSDRVYVMREGSIAG 488 Query: 489 EISEKDMSQQQIMQAIAG 506 E++ K+++Q+ IM G Sbjct: 489 ELNGKNITQENIMTLATG 506 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.319 0.137 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 33,874,001 Number of extensions: 1384451 Number of successful extensions: 25920 Number of sequences better than 1.0e-05: 2088 Number of HSP's gapped: 20593 Number of HSP's successfully gapped: 3949 Length of query: 507 Length of database: 38,378,431 Length adjustment: 111 Effective length of query: 396 Effective length of database: 25,576,357 Effective search space: 10128237372 Effective search space used: 10128237372 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 118 (50.1 bits)