BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0269.0004.p
         (641 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BH1908 [G] COG1472 Beta-glucosidase-related glycosidases               53   2e-06
BH3231 [G] COG2273 Beta-glucanase/Beta-glucan synthetase               51   6e-06

>BH1908 [G] COG1472 Beta-glucosidase-related glycosidases
          Length = 926

 Score = 52.8 bits (125), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 417 GDWVAVGNADFGSGASSFKANVASATGGGKIEIRLDSATGPLVGTLNVPNTGGAQSWQEV 476
           G W+A  + +     +      A+      +EIR D   GPLV    +P TGG Q+W  V
Sbjct: 837 GSWIAFHDINLEQPTNLLTVRAANENKQAVLEIRADRVDGPLVSQSVIPPTGGLQAWTTV 896

Query: 477 QTTVSNATG-VHRLYLVFTGSGSGNLFNF 504
              V+  T  +  LYLVF G    + F+F
Sbjct: 897 TAQVNGETSEIRDLYLVFKGEFQLSWFSF 925


>BH3231 [G] COG2273 Beta-glucanase/Beta-glucan synthetase
          Length = 346

 Score = 51.2 bits (121), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 8/90 (8%), Positives = 18/90 (20%), Gaps = 4/90 (4%)

Query: 417 GDWVAVGNADFGSGASSFKANVASATGGGKIEIRLDSATGPLVGTLNVPNTGGAQSWQEV 476
               +                +A  +  G   +      G                +   
Sbjct: 210 LLNRSFEVGLAEVSQYEGVELLA-YSCLGFGTLTGKYLNGAKPAGARNTLFSRFTRYSGE 268

Query: 477 QTTVSNAT--GVHRLYLVFTGSGSGNLFNF 504
           QT  + A    + R + +   +     F  
Sbjct: 269 QTQKAVAAYVDIARRHGL-DPAQMALAFVR 297


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.315    0.132    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 49,563,458
Number of extensions: 2146737
Number of successful extensions: 5087
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 5088
Number of HSP's successfully gapped: 2
Length of query: 641
Length of database: 38,378,431
Length adjustment: 113
Effective length of query: 528
Effective length of database: 25,345,689
Effective search space: 13382523792
Effective search space used: 13382523792
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 119 (50.4 bits)