BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0268.0002.p (243 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CAC2347 [R] COG1216 Predicted glycosyltransferases 214 7e-56 CAC2312 [R] COG1216 Predicted glycosyltransferases 99 9e-21 alr4493 [R] COG1216 Predicted glycosyltransferases 97 2e-20 CAC2321 [R] COG1216 Predicted glycosyltransferases 89 7e-18 MA2170 [R] COG1216 Predicted glycosyltransferases 85 8e-17 >CAC2347 [R] COG1216 Predicted glycosyltransferases Length = 243 Score = 214 bits (546), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 102/236 (43%), Positives = 150/236 (63%), Gaps = 5/236 (2%) Query: 2 TSIIIPTYNKLSLLSSCVEAVRAYTEL-PYEIIVIDNASTDGT-DAFCRENKLTFISLPQ 59 TSIII T N L C+E+++ YTE YEIIV+DN S DGT + ++ + I Sbjct: 3 TSIIILTCNNLRYSRRCIESIKKYTEKEAYEIIVVDNNSNDGTRNWLSKQKAIKKIYNNV 62 Query: 60 NRGFPAACNLGMQLASGDELLLLNNDVIVSQGWLTHLKNALYSAPDIGIVGPVTNYASGR 119 N GFP CN+G+++A G E+LLLNNDV+V+ WL +L+N LYS+ +IG VGP++N S Sbjct: 63 NVGFPRGCNMGIKVACGSEVLLLNNDVVVTHNWLNNLRNCLYSSYEIGAVGPISNNCSNG 122 Query: 120 QQISVPYTDISGFHAEAERLGLRGPSEWIGTQRLVGLCFLFKRELLDTIGFLDERYSPGH 179 Q+I+V Y I H +++ + +W +RL+G CFL KR ++ +G DER++PG+ Sbjct: 123 QKINVRYDSIEDMHRFSKKYNISNKKKWTEVKRLIGFCFLIKRNVIRKVGLFDERFTPGN 182 Query: 180 YEDDDYCYRARLRGYRLLIAGNCLVHHEGSASFKEVYSSRLQELVERNRRIFMDKW 235 +EDDDYC R R G+RL++ + VHH GS SFK +++ +L+E N+ KW Sbjct: 183 FEDDDYCIRMRKIGFRLMLCKDTFVHHYGSVSFK---NTQYLKLLEVNKSKLEKKW 235 >CAC2312 [R] COG1216 Predicted glycosyltransferases Length = 303 Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 73/247 (29%), Positives = 121/247 (48%), Gaps = 17/247 (6%) Query: 4 IIIPTYNKLSLLSSCVEAVRAYTELPYEIIVIDNASTDGTDAFCREN--KLTFISLPQNR 61 III YN CV+++ YE++++DN+STD + +E+ I +N Sbjct: 9 IIILNYNAYEDTLECVKSIGNIDYDNYELVLVDNSSTDDSYVKLKESLPSYNIIKSKENL 68 Query: 62 GFPAACNLGMQLA---SGDELLLLNNDVIVSQGWLTHLKNALYSAPDIGIVGPVTNYASG 118 G+ N+G++ A D + +LNNDV+V + +L L + + D+GIVG Sbjct: 69 GYANGNNIGIKYALENGADYICILNNDVVVEKDFLNKLVDKIIEKEDVGIVGSCICDYYR 128 Query: 119 RQQISVPYTDISGFHAEAERLGLRGPS------EWIGTQRLVGLCFLFKRELLDTIGFLD 172 R+ I I+ + A A R +G + + I L G CFL K E+ + IG + Sbjct: 129 REIIQGMGAHINLYFAAARRY-FKGKNYNEIEKKDIFVDYLEGACFLVKSEVFEKIGLIP 187 Query: 173 ERYSPGHYEDDDYCYRARLRGYRLLIAGNCLVHHEGSASFKEVYSSRLQELVERNRRIFM 232 E Y +E+ ++C RA GY+++ V+H+GSA+ + + S + RNR IF+ Sbjct: 188 ENYFL-FFEETEFCTRAINAGYKIMCIYESKVYHKGSATINK-FGSLSYAYLNRNRVIFV 245 Query: 233 ---DKWH 236 KW+ Sbjct: 246 RRNSKWY 252 >alr4493 [R] COG1216 Predicted glycosyltransferases Length = 359 Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 16/237 (6%), Positives = 42/237 (17%), Gaps = 17/237 (7%) Query: 1 MTSIIIPTYNKLSLLSSCVEAVRAY-TELPYEIIVIDNASTDGTDAFCREN--KLTFISL 57 + + + + + A Y +++ A T + Sbjct: 8 INRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPDADAFGVARLEEALRLR 67 Query: 58 PQNRGFPAACNLGMQLASGDELLLLNNDVIVSQGWLTHLKNALYSAPDIGIVGPVTNYAS 117 P G A + + S + V + Sbjct: 68 AGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWMKLDTGM 127 Query: 118 GRQQISVPYT-DISG------FHAEAE-RLGLRGPSEWIGTQR----LVGLCFLFKRELL 165 R + + + ++ L + + Sbjct: 128 HRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTFCEGKPG 187 Query: 166 DTIGFLDERYSPGHYEDDDYCYRARLRGYRLLIAGNC-LVHHEGSASFKEVYSSRLQ 221 + R + Y + + G + SS + Sbjct: 188 QRSIAASGGILL-WPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSSLIA 243 >CAC2321 [R] COG1216 Predicted glycosyltransferases Length = 298 Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 69/234 (29%), Positives = 110/234 (47%), Gaps = 27/234 (11%) Query: 3 SIIIPTYNKLSLLSSCVEAVRAYT-ELPYEIIVIDNASTDGTDAFCREN-----KLTFIS 56 S+II YN L C+ ++ T E+ +E+I++DN STD + F +E TFI Sbjct: 7 SVIILNYNAKRFLEECINSIYENTKEIKFEVILVDNKSTDNSAEFIKEKFTGKEDFTFIE 66 Query: 57 LPQNRGFPAACNLGMQLASGDELLLLNNDVIVSQGWLTHLKNALYSAPDIGIVGPVTNYA 116 N GF A N ++++ G +LLLN D +V+ + L +G+ G Sbjct: 67 SKVNCGFAAGNNKAIEVSKGRAVLLLNPDTVVNGNVIGETYKCLMKDDKVGVAGCKVLNP 126 Query: 117 SG------RQQISVP---YTDISGF------HAEAERLGLRGPS--EWIGTQRLVGLCFL 159 G R+ I P + I G + + R L S E+I + G + Sbjct: 127 DGTLQLACRRMIPTPKDAFYKIFGLSKIFKNNKKFTRYNLTYASADEFIDVDSVSGSYLM 186 Query: 160 FKRELLDTIGFLDERYSPGHYEDDDYCYRARLRGY--RLLIAGNCLVHHEGSAS 211 K+E++D IG+LDE + + E+ D+C RAR GY R G ++H++G +S Sbjct: 187 IKKEVIDKIGYLDETFFM-YGEEMDWCLRARKAGYIVRYCPVGT-IIHYKGESS 238 >MA2170 [R] COG1216 Predicted glycosyltransferases Length = 350 Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 65/244 (26%), Positives = 116/244 (47%), Gaps = 20/244 (8%) Query: 1 MTSIIIPTYNKLSLLSSCVEAVRAYTELPYEIIVIDNASTDGTDAFCREN--KLTFISLP 58 S++I +YN L+ C+ ++ + T +EIIV+DNASTD ++ F R N ++ + Sbjct: 7 FASVVILSYNSKEDLAECIPSLISQTYQDFEIIVVDNASTDASEEFVRINYPEIKVVQTG 66 Query: 59 QNRGFPAACNLGMQLASGDELLLLNNDVIVSQGWLTHLKNALYSAPDIGIVGPVTNYASG 118 +N G+ A N G ++A G+ ++++N D + WL L L + D+ I + Sbjct: 67 KNLGYAAGNNAGFEVAEGEYIVIINPDTVADSKWLAELIKPLEN--DLTIAATTSKILMY 124 Query: 119 RQQISV-PYTDISGFHAEAERLGLRGPS-EWIGTQR---LVGLCFLFKRELLDTIGFLDE 173 Q + + I+ + GL P+ E+ Q + G F +R++L I D Sbjct: 125 YQNDKINACSTINHYTGLTFCRGLNKPACEFDNYQEVGAVAGCSFAIRRDMLKNIDGFDS 184 Query: 174 RYSPGHYEDDDYCYRARLRGYRLLIAGNCLVHHEGSAS---FKEVYSSRLQELVERNRRI 230 + + ED D +R R G +++ A ++ H+ S +KE Y +ERNR + Sbjct: 185 EFFL-YLEDTDLSWRVRFAGGKIMYAPGSIIFHKCKLSIPPWKEFY-------LERNRYL 236 Query: 231 FMDK 234 + K Sbjct: 237 ILLK 240 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.322 0.139 0.425 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 18,894,654 Number of extensions: 761429 Number of successful extensions: 2779 Number of sequences better than 1.0e-05: 59 Number of HSP's gapped: 2802 Number of HSP's successfully gapped: 60 Length of query: 243 Length of database: 38,378,431 Length adjustment: 103 Effective length of query: 140 Effective length of database: 26,499,029 Effective search space: 3709864060 Effective search space used: 3709864060 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 114 (48.5 bits)