BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0267.0012.p
         (266 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ECU03g0210 [S] COG1774 Uncharacterized homolog of PSP1                 65   8e-11
ECU06g1580 [S] COG1774 Uncharacterized homolog of PSP1                 56   5e-08
YDR505c_2 [S] COG1774 Uncharacterized homolog of PSP1                  51   2e-06
YLR177w_2 [S] COG1774 Uncharacterized homolog of PSP1                  50   4e-06

>ECU03g0210 [S] COG1774 Uncharacterized homolog of PSP1
          Length = 244

 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 49/83 (59%)

Query: 61  KKVMRIAGETDARVVEENKGAAKDAFTTCLNKIRDHGLKMKLVDVEFTFDRNKIIFYFTA 120
           K++ R+A   D   +E  +     A   C  +    GL M++V  E+ +D NKI FYF +
Sbjct: 145 KRIYRLATLLDLEALERKRSMQARALEFCRERAMLGGLDMEVVGCEYQWDLNKITFYFAS 204

Query: 121 EGRVDFRELVKDLASIFRTRIEL 143
           + RVDFRELVK+L  +++TRI +
Sbjct: 205 DERVDFRELVKELYRVYKTRIWM 227


>ECU06g1580 [S] COG1774 Uncharacterized homolog of PSP1
          Length = 230

 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 48/83 (57%)

Query: 61  KKVMRIAGETDARVVEENKGAAKDAFTTCLNKIRDHGLKMKLVDVEFTFDRNKIIFYFTA 120
           KK++R A   D   +++ K    ++   C   +    L M+++  E+ +D  KI FYF +
Sbjct: 132 KKILRKASLDDLNKLKQRKRIEAESLRQCRELVGSRKLNMEILSCEYQWDMKKITFYFKS 191

Query: 121 EGRVDFRELVKDLASIFRTRIEL 143
           + R+DFR+L+K+L  +F+ RI +
Sbjct: 192 DRRIDFRDLLKELFKLFKVRIWM 214


>YDR505c_2 [S] COG1774 Uncharacterized homolog of PSP1
          Length = 262

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 33/46 (71%)

Query: 98  LKMKLVDVEFTFDRNKIIFYFTAEGRVDFRELVKDLASIFRTRIEL 143
           L +K+++ EF FDR ++ FY+  E R DFR+L+K+L   ++TRI L
Sbjct: 138 LNIKILNAEFQFDRKELTFYYVCEERNDFRDLIKELFKYYKTRIWL 183


>YLR177w_2 [S] COG1774 Uncharacterized homolog of PSP1
          Length = 232

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 8/94 (8%)

Query: 58  LPLKKVMRIAGETDARVVEENKGAAK-DAFTTCLNKIRDHGLK-------MKLVDVEFTF 109
           +P K+V+R A   ++     NK   +  A      K+R            +K+++ EF F
Sbjct: 73  IPSKQVLRFATPWESSTNLHNKFQDELKALHIAQLKLRSLNNNNSGGGLNIKILNAEFQF 132

Query: 110 DRNKIIFYFTAEGRVDFRELVKDLASIFRTRIEL 143
           DR K+ FY+  + R DFR+L+K+L   ++TRI L
Sbjct: 133 DRKKLTFYYICQERNDFRDLIKELFKFYKTRIWL 166


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.323    0.141    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 17,685,067
Number of extensions: 653588
Number of successful extensions: 1097
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1097
Number of HSP's successfully gapped: 4
Length of query: 266
Length of database: 38,378,431
Length adjustment: 105
Effective length of query: 161
Effective length of database: 26,268,361
Effective search space: 4229206121
Effective search space used: 4229206121
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 115 (48.9 bits)