BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0264.0038.p
         (91 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BH2559 [D] COG0849 Actin-like ATPase involved in cell division         55   2e-08

>BH2559 [D] COG0849 Actin-like ATPase involved in cell division
          Length = 425

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 3/94 (3%)

Query: 1   MPGVLKAAQTELAASVRIAVPDYIGVRDPGFTGGVGILHNVVRSFXXXXXXXXXXXXXTV 60
           MPGVL+ A+  L  +VR+A+PDYIGVR+P +T GVG++    ++                
Sbjct: 331 MPGVLELAKETLGRNVRVAIPDYIGVREPQYTTGVGLIQFAYKNVKIQGKEVAAAVAEAG 390

Query: 61  NRNKQNAVPSQD---TVKKPGLVERLKNMFSEFI 91
              +Q     ++   T + PG+  ++KN F  F+
Sbjct: 391 VEQEQRPKKEKERSRTNEGPGVKSKVKNWFKVFL 424


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.319    0.136    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 5,825,055
Number of extensions: 144500
Number of successful extensions: 170
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 170
Number of HSP's successfully gapped: 1
Length of query: 91
Length of database: 38,378,431
Length adjustment: 61
Effective length of query: 30
Effective length of database: 31,343,057
Effective search space: 940291710
Effective search space used: 940291710
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 109 (46.6 bits)