BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0264.0037.p (371 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PH0003 [D] COG0206 Cell division GTPase 279 6e-75 PAB2351 [D] COG0206 Cell division GTPase 276 3e-74 STM0836 [P] COG0471 Di- and tricarboxylate transporters 275 8e-74 AF0535 [D] COG0206 Cell division GTPase 269 4e-72 mlr7256 [D] COG0206 Cell division GTPase 269 6e-72 >PH0003 [D] COG0206 Cell division GTPase Length = 372 Score = 279 bits (713), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 150/307 (48%), Positives = 208/307 (67%), Gaps = 2/307 (0%) Query: 12 AQIKVIGVGGGGSNAVNRMIENGVQGVEFITVNTDAQALHMAKSEHKLQIGDKLTRGLGA 71 A+I V+GVGG G N VNRM+E GV G + I VNTDAQ L K+ K+ IG ++TRGLGA Sbjct: 42 ARIHVVGVGGAGCNTVNRMMEVGVTGAKIIAVNTDAQDLLKVKAHQKILIGKEITRGLGA 101 Query: 72 GANPEVGKKAAEESRDLISNTLKGADMVFVXXXXXXXXXXXXXPVIAEIARECGALTVGV 131 G +P++G++AA+ES I L+GADMVFV PVIAE+AR+ GALTV V Sbjct: 102 GNDPKIGEEAAKESEREIREALEGADMVFVTCGLGGGTGTGAAPVIAEMARKMGALTVSV 161 Query: 132 VTRPFTFEGRKRSNQAELGIEALKEKVDTLIVIPNDRLLEIVDKKTPMLEAFREADNVLR 191 VT PFT EG +R+ AE G++ L + DT+IVIPND+LLE V K P+ AF+ AD +L Sbjct: 162 VTLPFTMEGIRRAKNAEYGLKRLAKASDTVIVIPNDKLLE-VAPKLPIQMAFKVADEILV 220 Query: 192 QAVQGISDLIAVPGLINLDFADVKTIMTERGSALMGIGIANGENRASEAARKAIMSPLLE 251 QAV+GI++LI PGL+NLDF DV+ +M + G A++GIG ++ E RA EAA +A+ SPLL+ Sbjct: 221 QAVKGITELITKPGLVNLDFNDVRAVMKDGGVAMIGIGESDSEKRALEAAEQALNSPLLD 280 Query: 252 TSIEGARGVIMNITGGSNLSLYEVNEAAEIVTSASDPEVNMIFGAIIEESMKDDIKVTVI 311 I GA+G +++I+ G+++ L E + E VT DP+ +I+G +E ++ I+V VI Sbjct: 281 VDISGAKGALISIS-GADVKLEEAQQIIEYVTRNVDPKAQVIWGIQLEPELEKTIRVMVI 339 Query: 312 ATGFEHK 318 TG + Sbjct: 340 VTGITSR 346 >PAB2351 [D] COG0206 Cell division GTPase Length = 372 Score = 276 bits (707), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 149/307 (48%), Positives = 208/307 (67%), Gaps = 2/307 (0%) Query: 12 AQIKVIGVGGGGSNAVNRMIENGVQGVEFITVNTDAQALHMAKSEHKLQIGDKLTRGLGA 71 A+I V+GVGG G N VNRM+E GV G + I VNTDAQ L K+ K+ IG +LTRGLGA Sbjct: 42 ARIYVVGVGGAGCNTVNRMMEVGVTGAKIIAVNTDAQDLLKIKAHQKILIGKELTRGLGA 101 Query: 72 GANPEVGKKAAEESRDLISNTLKGADMVFVXXXXXXXXXXXXXPVIAEIARECGALTVGV 131 G +P++G++AA+ES + L+GADMVFV PVIAE+A++ GALTV V Sbjct: 102 GNDPKIGEEAAKESERELREALEGADMVFVTCGLGGGTGTGAAPVIAEMAKKMGALTVSV 161 Query: 132 VTRPFTFEGRKRSNQAELGIEALKEKVDTLIVIPNDRLLEIVDKKTPMLEAFREADNVLR 191 VT PFT EG +R+ AE G++ L + DT+IVIPND+LLE V K P+ AF+ AD +L Sbjct: 162 VTLPFTMEGIRRAKNAEYGLKRLAKASDTVIVIPNDKLLE-VAPKLPIQMAFKVADEILV 220 Query: 192 QAVQGISDLIAVPGLINLDFADVKTIMTERGSALMGIGIANGENRASEAARKAIMSPLLE 251 QAV+GI++LI PGL+NLDF DV+ +M + G A++GIG ++ E RA EAA +A+ SPLL+ Sbjct: 221 QAVKGITELITKPGLVNLDFNDVRAVMKDGGVAMIGIGESDSEKRALEAAEQALNSPLLD 280 Query: 252 TSIEGARGVIMNITGGSNLSLYEVNEAAEIVTSASDPEVNMIFGAIIEESMKDDIKVTVI 311 I GA+G +++I+ G+++ L E + E VT DP+ +I+G +E ++ I+V VI Sbjct: 281 VDISGAKGALISIS-GADVKLEEAQQIIEYVTRNVDPKAQVIWGIQLEPELEKTIRVMVI 339 Query: 312 ATGFEHK 318 TG + Sbjct: 340 VTGVTSR 346 >STM0836 [P] COG0471 Di- and tricarboxylate transporters Length = 370 Score = 275 bits (703), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 21/304 (6%), Positives = 64/304 (21%), Gaps = 1/304 (0%) Query: 13 QIKVIGVGGGGSNAVNRMIENGVQGVEFITVNTDAQALHMAKSEHKLQIGDKLTRGLGAG 72 + V + + + + + + T L ++ + Sbjct: 23 MALSLFVPFAPRAWPGAIDWHTIITLSGLMLLTKGVELSGYFDVLGRKMTRRFHTERQLA 82 Query: 73 ANPEVGKKAAEESRDLISNTLKGADMVFVXXXXXXXXXXXXXPVIAEIARECGALTVGVV 132 + A + A LT Sbjct: 83 MFLVLAAAALSTFLTNDVALFIVVPLTITLKKLCAIPVNRLIIFEALAVNAGSLLTPVGN 142 Query: 133 TRPFTFEGRKRSNQAELGIEALKEKVDTLIVIPNDRLLEIVDKKTPMLEAFREADNVLRQ 192 + GR AE + V ++ + + R R Sbjct: 143 PQNILLWGRSGLTFAEFSGQMAPLAVMMMLTLLLLCWFCFPGRALQYHTGTRSPQWQPRL 202 Query: 193 AVQGISDLIAVPGLINLDFADVKTIMTERGSALMGIGIANGENRASEAARKAIMSPLLET 252 ++ + + L ++ G ++ + + A+ + Sbjct: 203 VWSCLALYVVFLTALELRQELWGLVLVAAGFIVLARRVIVSVDWTLLLVFMAMFIDVHLL 262 Query: 253 SIEGARGVIMNITGGSNLSLYEVNEAAEIVTSASDPEVNMIFGAIIEESMKDD-IKVTVI 311 + A + N G + + ++ P ++ + ++ + + Sbjct: 263 TQLPALQGVFNQVGALSHLGLWLTAIGLSQIISNVPSTILLLNYVPASTLLAWAVNIGGF 322 Query: 312 ATGF 315 Sbjct: 323 GLLP 326 >AF0535 [D] COG0206 Cell division GTPase Length = 368 Score = 269 bits (688), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 134/291 (46%), Positives = 198/291 (68%), Gaps = 1/291 (0%) Query: 24 SNAVNRMIENGVQGVEFITVNTDAQALHMAKSEHKLQIGDKLTRGLGAGANPEVGKKAAE 83 N + RM E G++G E I +NTD Q L+ K+ ++ IG + TRGLGAG+ P+VG++AA Sbjct: 55 CNTITRMYEEGIEGAELIALNTDVQHLYYTKANRRILIGKRRTRGLGAGSLPQVGEEAAR 114 Query: 84 ESRDLISNTLKGADMVFVXXXXXXXXXXXXXPVIAEIARECGALTVGVVTRPFTFEGRKR 143 ES D I ++G+DMVFV PV+AE A+E GALT+ VVT PF+ EG R Sbjct: 115 ESEDEIKKLVEGSDMVFVTCGLGGGTGTGAAPVVAEAAQEAGALTIAVVTFPFSAEGAVR 174 Query: 144 SNQAELGIEALKEKVDTLIVIPNDRLLEIVDKKTPMLEAFREADNVLRQAVQGISDLIAV 203 AE G+E L+E DT+IVIPNDRLLE+V PM AF+ AD +L +AV+GI++LI Sbjct: 175 RANAEAGLERLREVADTVIVIPNDRLLEVV-PNYPMQLAFKVADEILMRAVKGITELITK 233 Query: 204 PGLINLDFADVKTIMTERGSALMGIGIANGENRASEAARKAIMSPLLETSIEGARGVIMN 263 P LINLDFADV+T+M + G A++G+G A+GE++A+E+ RKA+ SPLL+ + GA+ ++N Sbjct: 234 PALINLDFADVRTVMEKGGVAMIGLGEASGEDKAAESVRKALKSPLLDVDVSGAKAALVN 293 Query: 264 ITGGSNLSLYEVNEAAEIVTSASDPEVNMIFGAIIEESMKDDIKVTVIATG 314 +TGG ++++ E E + S DP+ +I+GA+I+ +++ ++ +I TG Sbjct: 294 VTGGPDMTIEEAESVIEEIYSKVDPDARIIWGAMIDPELENTMRTLIIVTG 344 >mlr7256 [D] COG0206 Cell division GTPase Length = 331 Score = 269 bits (687), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 16/306 (5%), Positives = 59/306 (19%), Gaps = 1/306 (0%) Query: 13 QIKVIGVGGGGSNAVNRMIENGVQGVEFITVNTDAQALHMAKSEHKLQIGDKLTRGLGAG 72 G G+ ++ ++ + + Q + + IG L + Sbjct: 15 GQGDNLPSGTGNQPLSSQQRTSLESLMTKVTSLTQQQRAELWAGIRHDIGLSGDSPLLSR 74 Query: 73 ANPEVGKKAAEESRDLISNTLKGADMVFVXXXXXXXXXXXXXPVIAEIARECGALTVGVV 132 P A+ + + + L Sbjct: 75 HFPAAEHNLAQRLLAAQKSHSARQLLAQLGEYLRLGNNRQAVTDYIRHNFGQTPLNQLSP 134 Query: 133 TRPFTFEGRKRSNQAELGIEALKEKVDTLIVIPNDRLLEIVDKKTPMLEAFREADNVLRQ 192 + T + + + +E D ++ L+ + K Sbjct: 135 EQLKTILTLLQEGKMVIPQPQQREATDRPLLPAEHNALKQLVTKLAAATGEPSKQIWQSM 194 Query: 193 AVQGISDLIAVPGLINLDFADVKTIMTERGSALMGIGIANGENRASEAARKAIMSPLL-E 251 + + + S + + + + + ++ L Sbjct: 195 LELSGVKDGELIPAKLFNHLVTWLQARQTLSQQNTPTLESLQMTLKQPLDASELAALSAY 254 Query: 252 TSIEGARGVIMNITGGSNLSLYEVNEAAEIVTSASDPEVNMIFGAIIEESMKDDIKVTVI 311 + +++ + + ++ ++ Sbjct: 255 IQQKYGLSAQSSLSSAQAEDILNQLYQRRVKGIDPRVMQPLLNPFPPMMDTLQNMATRPA 314 Query: 312 ATGFEH 317 Sbjct: 315 LWILLV 320 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.315 0.134 0.362 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 23,896,651 Number of extensions: 930064 Number of successful extensions: 1609 Number of sequences better than 1.0e-05: 26 Number of HSP's gapped: 1575 Number of HSP's successfully gapped: 26 Length of query: 371 Length of database: 38,378,431 Length adjustment: 108 Effective length of query: 263 Effective length of database: 25,922,359 Effective search space: 6817580417 Effective search space used: 6817580417 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 116 (49.3 bits)