BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0263.0007.p (514 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Cgl1223 [G] COG1129 ABC-type sugar transport system, ATPase comp... 291 2e-78 STM3882 [G] COG1129 ABC-type sugar transport system, ATPase comp... 278 2e-74 BH3441 [G] COG1129 ABC-type sugar transport system, ATPase compo... 276 6e-74 HI0502 [G] COG1129 ABC-type sugar transport system, ATPase compo... 276 6e-74 rbsA [G] COG1129 ABC-type sugar transport system, ATPase component 275 1e-73 >Cgl1223 [G] COG1129 ABC-type sugar transport system, ATPase component Length = 524 Score = 291 bits (744), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 169/490 (34%), Positives = 282/490 (57%), Gaps = 14/490 (2%) Query: 9 DKQVFLETRNISKKFNDVTAVNQVSMNIRLGEIRGLIGENGSGKSTISAMMSGLLPATGG 68 D L+ +SK F V +NQVS+++R G + L+GENG+GKST+ MMSG+ GG Sbjct: 12 DPAPILQLDKVSKSFGPVNVINQVSIDVRPGRVLALLGENGAGKSTLIKMMSGVYQPDGG 71 Query: 69 DMRIAGALYRPKSTLDAREHKVSMIVQETGTIPELSIAENMFLGEEKRFVKRGFVDHKRM 128 + + G T A ++ I QE +P +++AEN+ LG R K G V+ K + Sbjct: 72 QILVDGKPTTLPDTKTAESFGIATIHQELNLVPTMTVAENVMLGRTPR--KWGLVNFKHL 129 Query: 129 NQEAKRALELIDLHELDVTRPMYTLGFEQRKLIEIARALYYDPTLFIVDETTTALSHEGR 188 ++A+ AL+LI + ++D+ + +LG +++++EIA+AL + + I+DE T AL+ Sbjct: 130 RRQAQAALDLIGV-DVDLNAQVGSLGIARQQMVEIAKALSMNARILILDEPTAALTGREI 188 Query: 189 VLIHQIMRRLRDQNKAVLFISHDLPELMEVCDVLTVMRDGNLITTIEKQDFNENHIKQSM 248 + +++ +L+++ A++FISH L E+ + D ++V+RDG I + D +E+ + + M Sbjct: 189 DQLFKVVDQLKEKGVAMVFISHHLDEIARIGDTVSVLRDGQFIAEL-PADTDEDELVRLM 247 Query: 249 VGRVIEGNYYRTDYDGSYGEQVLIXXXXXXXXXLRDIDLELHKGEXXXXXXXXXXXMHEL 308 VGR IE Y R+ + G+ +L DI L + GE E+ Sbjct: 248 VGRSIENQYPRSAPE--IGQPLLEVKNLNAEGRFTDISLTVRAGEVVGLAGLVGAGRTEV 305 Query: 309 GKLMYGGLKPVQGEVIVYEEREDGAPAIPRKLNSIKTAMASRIGYVSKDRDKETLIMEAS 368 + + G K GEVIV ++ G I A+ + IG++ +DR + L++ +S Sbjct: 306 VRSIAGVDKVDSGEVIVAGKKLRGG--------DISEAIKNGIGHIPEDRKAQGLVLGSS 357 Query: 369 IKDNLVLSALDQLSRFGLILPGREKRFAAEQMEELQIKASGMNQKVGELSGGNKQKVSFG 428 ++DNL L+ L +R GL+ + + AAE E+L+I+ + + Q + +LSGGN+QK FG Sbjct: 358 VEDNLGLATLASTARAGLVDRSGQHKRAAEVAEKLRIRMASLKQPISDLSGGNQQKAVFG 417 Query: 429 KWIGNHSKILILDSPTRGVDVGVKTTMYQLLYSLKQEGYSILMISEELPELIGMSDRILM 488 +W+ S +L+LD PTRGVDVG K +Y ++ + ++G ++LM+S ELPE++GM+DRIL+ Sbjct: 418 RWVLAGSNVLLLDEPTRGVDVGAKVEIYNIINEMTEKGGAVLMVSSELPEVLGMADRILV 477 Query: 489 MKDGRIRKEF 498 M GRI E Sbjct: 478 MSGGRIAGEL 487 Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/248 (22%), Positives = 118/248 (47%), Gaps = 13/248 (5%) Query: 11 QVFLETRNISK--KFNDVTAVNQVSMNIRLGEIRGLIGENGSGKSTISAMMSGLLPATGG 68 Q LE +N++ +F D+ S+ +R GE+ GL G G+G++ + ++G+ G Sbjct: 265 QPLLEVKNLNAEGRFTDI------SLTVRAGEVVGLAGLVGAGRTEVVRSIAGVDKVDSG 318 Query: 69 DMRIAGALYRPKSTLDAREHKVSMIVQE---TGTIPELSIAENMFLGEEKRFVKRGFVDH 125 ++ +AG R +A ++ + I ++ G + S+ +N+ L + G VD Sbjct: 319 EVIVAGKKLRGGDISEAIKNGIGHIPEDRKAQGLVLGSSVEDNLGLATLASTARAGLVDR 378 Query: 126 KRMNQEAKRALELIDLHELDVTRPMYTL-GFEQRKLIEIARALYYDPTLFIVDETTTALS 184 ++ A E + + + +P+ L G Q+K + R + + ++DE T + Sbjct: 379 SGQHKRAAEVAEKLRIRMASLKQPISDLSGGNQQKAV-FGRWVLAGSNVLLLDEPTRGVD 437 Query: 185 HEGRVLIHQIMRRLRDQNKAVLFISHDLPELMEVCDVLTVMRDGNLITTIEKQDFNENHI 244 +V I+ I+ + ++ AVL +S +LPE++ + D + VM G + + + ++ + Sbjct: 438 VGAKVEIYNIINEMTEKGGAVLMVSSELPEVLGMADRILVMSGGRIAGELPAKGTTQDDV 497 Query: 245 KQSMVGRV 252 V +V Sbjct: 498 MALAVSQV 505 >STM3882 [G] COG1129 ABC-type sugar transport system, ATPase component Length = 501 Score = 278 bits (710), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 171/502 (34%), Positives = 278/502 (55%), Gaps = 22/502 (4%) Query: 13 FLETRNISKKFNDVTAVNQVSMNIRLGEIRGLIGENGSGKSTISAMMSGLLPATGGDMRI 72 L+ + I K F V A++ ++N+ G + L+GENG+GKST+ +++G+ G + Sbjct: 4 LLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSLLW 63 Query: 73 AG---ALYRPKSTLDAREHKVSMIVQETGTIPELSIAENMFLGEEKRFVKR-GFVDHKRM 128 G PKS+ +E + +I QE IP+L+IAEN+FLG E FV R G +D K+M Sbjct: 64 LGKETTFNGPKSS---QEAGIGIIHQELNLIPQLTIAENIFLGRE--FVNRFGKIDWKKM 118 Query: 129 NQEAKRALELIDLHELDVTRPMYTLGFEQRKLIEIARALYYDPTLFIVDETTTALSHEGR 188 EA L ++L + + L ++++EIA+ L ++ + I+DE T AL+ Sbjct: 119 YAEADHLLAKLNLR-FKSDKLVGELSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTET 177 Query: 189 VLIHQIMRRLRDQNKAVLFISHDLPELMEVCDVLTVMRDGNLITTIEKQDFNENHIKQSM 248 + +++R L+ Q + +++ISH + E+ E+CD +TV RDG I E E+ + + M Sbjct: 178 DSLFRVIRELKSQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREVATLTEDSLIEMM 237 Query: 249 VGRVIEGNYYRTDYDGSYGEQVLIXXXXXXXXXLRDIDLELHKGEXXXXXXXXXXXMHEL 308 VGR +E Y D + GE + + + D+ L KGE EL Sbjct: 238 VGRKLEDQY--PHLDNAPGE-IRLKVDNLCGPGVNDVSFVLRKGEILGISGLMGAGRTEL 294 Query: 309 GKLMYGGLKPVQGEVIVYEEREDGAPAIPRKLNSIKTAMASRIGYVSKDRDKETLIMEAS 368 K++YG + G V + DG + R S + +A+ I Y+S+DR ++ L++ S Sbjct: 295 MKVLYGAMPRTSGYVTL-----DGHEVVTR---SPQDGLANGIVYISEDRKRDGLVLGMS 346 Query: 369 IKDNLVLSALDQLSRFGLILPGR-EKRFAAEQMEELQIKASGMNQKVGELSGGNKQKVSF 427 +K+N+ L+ALD SR G L + E++ + + +K M Q +G LSGGN+QKV+ Sbjct: 347 VKENMSLTALDYFSRAGGSLKHKDEQQAVGDFIRLFNVKTPSMEQAIGLLSGGNQQKVAI 406 Query: 428 GKWIGNHSKILILDSPTRGVDVGVKTTMYQLLYSLKQEGYSILMISEELPELIGMSDRIL 487 + + K+LILD PTRGVDVG K +YQL+ K +G SI+++S E+PE++GMSDRI+ Sbjct: 407 ARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKADGLSIILVSSEMPEVLGMSDRII 466 Query: 488 MMKDGRIRKEFARSENLSEAML 509 +M +G + EF R + E ++ Sbjct: 467 VMHEGHLSGEFTREQATQEVLM 488 Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 54/229 (23%), Positives = 112/229 (48%), Gaps = 4/229 (1%) Query: 28 AVNQVSMNIRLGEIRGLIGENGSGKSTISAMMSGLLPATGGDMRIAGALYRPKSTLDARE 87 VN VS +R GEI G+ G G+G++ + ++ G +P T G + + G +S D Sbjct: 267 GVNDVSFVLRKGEILGISGLMGAGRTELMKVLYGAMPRTSGYVTLDGHEVVTRSPQDGLA 326 Query: 88 HKVSMIVQE---TGTIPELSIAENMFLGEEKRFVKRG-FVDHKRMNQEAKRALELIDLHE 143 + + I ++ G + +S+ ENM L F + G + HK Q + L ++ Sbjct: 327 NGIVYISEDRKRDGLVLGMSVKENMSLTALDYFSRAGGSLKHKDEQQAVGDFIRLFNVKT 386 Query: 144 LDVTRPMYTLGFEQRKLIEIARALYYDPTLFIVDETTTALSHEGRVLIHQIMRRLRDQNK 203 + + + L ++ + IAR L P + I+DE T + + I+Q++ + + Sbjct: 387 PSMEQAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKADGL 446 Query: 204 AVLFISHDLPELMEVCDVLTVMRDGNLITTIEKQDFNENHIKQSMVGRV 252 +++ +S ++PE++ + D + VM +G+L ++ + + + VG++ Sbjct: 447 SIILVSSEMPEVLGMSDRIIVMHEGHLSGEFTREQATQEVLMAAAVGKL 495 >BH3441 [G] COG1129 ABC-type sugar transport system, ATPase component Length = 517 Score = 276 bits (706), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 182/521 (34%), Positives = 289/521 (55%), Gaps = 44/521 (8%) Query: 11 QVFLETRNISKKFNDVTAVNQVSMNIRLGEIRGLIGENGSGKSTISAMMSGLLP--ATGG 68 LE RNI+K F V A+N V++ + GEI L+GENG+GKST+ ++SG+ P G Sbjct: 5 NCLLEMRNITKAFPGVKALNNVNLKVEQGEIHALVGENGAGKSTLMKVLSGVYPHGTYEG 64 Query: 69 DMRIAGALYRPKSTLDAREHKVSMIVQETGTIPELSIAENMFLGEEKRFVKRGFVDHKRM 128 D+ G + + K ++ + + +I QE +PELSIAEN+FLG E+ K G +D + Sbjct: 65 DILFEGRVCQFKDIKESEQLGIVIIHQELALVPELSIAENIFLGNEQ--AKNGVIDWNQT 122 Query: 129 NQEAKRALELIDLHELDVTRPMYTLGFEQRKLIEIARALYYDPTLFIVDETTTALSHEGR 188 EA + L+ + L + T M +G +++L+EIA+AL L I+DE T AL+ E Sbjct: 123 ITEAAKLLKKVGLSDSPRTLAM-NIGVGKQQLVEIAKALSKKVKLLILDEPTAALNEEDS 181 Query: 189 VLIHQIMRRLRDQNKAVLFISHDLPELMEVCDVLTVMRDGNLITTIEKQ--DFNENHIKQ 246 + ++ + Q + ISH L E+ V D LT++RDG I T+ Q + E+ I + Sbjct: 182 QNLLHLLLEFKKQGMTSIIISHKLNEISYVADHLTILRDGQSIETLSLQSGEVTEDRIIK 241 Query: 247 SMVGR----------------VIEGNYYRTDYDGSYGEQVLIXXXXXXXXXLRDIDLELH 290 MVGR ++E N++ D D + ++ LI +D++L L Sbjct: 242 GMVGRDLENRFPPREPKIGDVILEVNHWHVD-DPLHPDRSLI----------KDVNLYLK 290 Query: 291 KGEXXXXXXXXXXXMHELGKLMYGGL--KPVQGEVIVYEEREDGAPAIPRKLNSIKTAMA 348 +GE EL ++G K ++G++I +DG K++S+K A+ Sbjct: 291 RGEIVGVAGLMGAGRTELAMSIFGKSYGKNIRGQLI-----KDGKEI---KVHSVKDAID 342 Query: 349 SRIGYVSKDRDKETLIMEASIKDNLVLSALDQLSRFGLILPGREKRFAAEQMEELQIKAS 408 + YV++DR LI+ IK N+ L++L++LS+ G++ RE + A + +++ I+ Sbjct: 343 HGLAYVTEDRKTYGLILIDDIKHNISLTSLEKLSKNGVVDKTREVKEAEDFRKKMNIRTP 402 Query: 409 GMNQKVGELSGGNKQKVSFGKWIGNHSKILILDSPTRGVDVGVKTTMYQLLYSLKQEGYS 468 ++QK G LSGGN+QKV KWI + ILILD PTRG+DVG K +Y +++ L +G + Sbjct: 403 SIDQKTGNLSGGNQQKVVLSKWILSGPDILILDEPTRGIDVGAKYEIYSVIHELAAQGKA 462 Query: 469 ILMISEELPELIGMSDRILMMKDGRIRKEFARSENLSEAML 509 +L+IS ELPEL+G+SDRI + +GRI E R E E ++ Sbjct: 463 VLVISSELPELLGLSDRIYALCEGRITGEVTREEANQEILM 503 >HI0502 [G] COG1129 ABC-type sugar transport system, ATPase component Length = 493 Score = 276 bits (706), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 170/504 (33%), Positives = 278/504 (55%), Gaps = 23/504 (4%) Query: 11 QVFLETRNISKKFNDVTAVNQVSMNIRLGEIRGLIGENGSGKSTISAMMSGLLPATGGDM 70 + L+ + K F V A+N +++ G + L+GENG+GKST+ +++G+ G + Sbjct: 2 ETLLKISGVDKSFPGVKALNNACLSVYAGRVMALMGENGAGKSTLMKVLTGIYSKDAGTI 61 Query: 71 RIAGALYRPKSTLDAREHKVSMIVQETGTIPELSIAENMFLGEEKRFVKRGFVDHKRMNQ 130 ++E +S+I QE + L+IAEN+FLG E + G ++ ++M+Q Sbjct: 62 EYLNRSVNFNGPKASQEAGISIIHQELNLVGNLTIAENIFLGREFK-TSWGAINWQKMHQ 120 Query: 131 EAKRALELIDLHELDVTRPMYTLGFE----QRKLIEIARALYYDPTLFIVDETTTALSHE 186 EA + L L VT L E +++++EIA+AL ++ + I+DE T AL+ Sbjct: 121 EADKLLA-----RLGVTHSSKQLCAELSIGEQQMVEIAKALSFESKVIIMDEPTDALTDT 175 Query: 187 GRVLIHQIMRRLRDQNKAVLFISHDLPELMEVCDVLTVMRDGNLITTIEKQDFNENHIKQ 246 + ++R L+ +N+ +++ISH L E+ ++CD +TV+RDG I + E+ + + Sbjct: 176 ETEALFNVIRELKAENRGIVYISHRLKEIFQICDDVTVLRDGQFIGERVMAEITEDDLIE 235 Query: 247 SMVGRVIEGNYYRTDYDGSYGEQVLIXXXXXXXXXLRDIDLELHKGEXXXXXXXXXXXMH 306 MVGR ++ Y + GE VL + D+ +LH GE Sbjct: 236 MMVGRRLDEQYPHLSQE--KGECVL-DVKHVSGSGIDDVSFKLHAGEIVGVSGLMGAGRT 292 Query: 307 ELGKLMYGGLKPVQGEV-IVYEEREDGAPAIPRKLNSIKTAMASRIGYVSKDRDKETLIM 365 ELGKL+YG L G+V + +E E+ +P + + + I Y+S+DR + L++ Sbjct: 293 ELGKLLYGALPKTAGKVRLKNQEIENRSP---------QDGLDNGIVYISEDRKGDGLVL 343 Query: 366 EASIKDNLVLSALDQLSRFGLILPGREKRFAAEQMEELQIKASGMNQKVGELSGGNKQKV 425 S+K+N+ L++LD S+ G I EK + + IK +Q+VG LSGGN+QKV Sbjct: 344 GMSVKENMSLTSLDHFSQKGGIRHQAEKMAVDDFILMFNIKTPNRDQQVGLLSGGNQQKV 403 Query: 426 SFGKWIGNHSKILILDSPTRGVDVGVKTTMYQLLYSLKQEGYSILMISEELPELIGMSDR 485 + + + +LILD PTRGVDVG K +YQL+ K+EG SILMIS ++PE++GMSDR Sbjct: 404 AIARGLMTRPNVLILDEPTRGVDVGAKKEIYQLINEFKKEGLSILMISSDMPEVLGMSDR 463 Query: 486 ILMMKDGRIRKEFARSENLSEAML 509 +L+M++G+I EF+R E E +L Sbjct: 464 VLVMREGKISAEFSREEATQEKLL 487 Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 51/228 (22%), Positives = 113/228 (49%), Gaps = 3/228 (1%) Query: 27 TAVNQVSMNIRLGEIRGLIGENGSGKSTISAMMSGLLPATGGDMRIAGALYRPKSTLDAR 86 + ++ VS + GEI G+ G G+G++ + ++ G LP T G +R+ +S D Sbjct: 266 SGIDDVSFKLHAGEIVGVSGLMGAGRTELGKLLYGALPKTAGKVRLKNQEIENRSPQDGL 325 Query: 87 EHKVSMIVQE---TGTIPELSIAENMFLGEEKRFVKRGFVDHKRMNQEAKRALELIDLHE 143 ++ + I ++ G + +S+ ENM L F ++G + H+ + + ++ Sbjct: 326 DNGIVYISEDRKGDGLVLGMSVKENMSLTSLDHFSQKGGIRHQAEKMAVDDFILMFNIKT 385 Query: 144 LDVTRPMYTLGFEQRKLIEIARALYYDPTLFIVDETTTALSHEGRVLIHQIMRRLRDQNK 203 + + + L ++ + IAR L P + I+DE T + + I+Q++ + + Sbjct: 386 PNRDQQVGLLSGGNQQKVAIARGLMTRPNVLILDEPTRGVDVGAKKEIYQLINEFKKEGL 445 Query: 204 AVLFISHDLPELMEVCDVLTVMRDGNLITTIEKQDFNENHIKQSMVGR 251 ++L IS D+PE++ + D + VMR+G + +++ + + + +G+ Sbjct: 446 SILMISSDMPEVLGMSDRVLVMREGKISAEFSREEATQEKLLAAAIGK 493 >rbsA [G] COG1129 ABC-type sugar transport system, ATPase component Length = 501 Score = 275 bits (703), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 170/504 (33%), Positives = 278/504 (55%), Gaps = 22/504 (4%) Query: 11 QVFLETRNISKKFNDVTAVNQVSMNIRLGEIRGLIGENGSGKSTISAMMSGLLPATGGDM 70 + L+ + I K F V A++ ++N+ G + L+GENG+GKST+ +++G+ G + Sbjct: 2 EALLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGTL 61 Query: 71 RIAG---ALYRPKSTLDAREHKVSMIVQETGTIPELSIAENMFLGEEKRFVKR-GFVDHK 126 G PKS+ +E + +I QE IP+L+IAEN+FLG E FV R G +D K Sbjct: 62 LWLGKETTFTGPKSS---QEAGIGIIHQELNLIPQLTIAENIFLGRE--FVNRFGKIDWK 116 Query: 127 RMNQEAKRALELIDLHELDVTRPMYTLGFEQRKLIEIARALYYDPTLFIVDETTTALSHE 186 M EA + L ++L + + L ++++EIA+ L ++ + I+DE T AL+ Sbjct: 117 TMYAEADKLLAKLNLR-FKSDKLVGDLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDT 175 Query: 187 GRVLIHQIMRRLRDQNKAVLFISHDLPELMEVCDVLTVMRDGNLITTIEKQDFNENHIKQ 246 + +++R L+ Q + +++ISH + E+ E+CD +TV RDG I E E+ + + Sbjct: 176 ETESLFRVIRELKSQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREVASLTEDSLIE 235 Query: 247 SMVGRVIEGNYYRTDYDGSYGEQVLIXXXXXXXXXLRDIDLELHKGEXXXXXXXXXXXMH 306 MVGR +E Y D + G+ + + + D+ L KGE Sbjct: 236 MMVGRKLEDQY--PHLDKAPGD-IRLKVDNLCGPGVNDVSFTLRKGEILGVSGLMGAGRT 292 Query: 307 ELGKLMYGGLKPVQGEVIVYEEREDGAPAIPRKLNSIKTAMASRIGYVSKDRDKETLIME 366 EL K++YG L G V + DG + R S + +A+ I Y+S+DR ++ L++ Sbjct: 293 ELMKVLYGALPRTSGYVTL-----DGHEVVTR---SPQDGLANGIVYISEDRKRDGLVLG 344 Query: 367 ASIKDNLVLSALDQLSRFGLILP-GREKRFAAEQMEELQIKASGMNQKVGELSGGNKQKV 425 S+K+N+ L+AL SR G L E++ ++ + +K M Q +G LSGGN+QKV Sbjct: 345 MSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNVKTPSMEQAIGLLSGGNQQKV 404 Query: 426 SFGKWIGNHSKILILDSPTRGVDVGVKTTMYQLLYSLKQEGYSILMISEELPELIGMSDR 485 + + + K+LILD PTRGVDVG K +YQL+ K +G SI+++S E+PE++GMSDR Sbjct: 405 AIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKADGLSIILVSSEMPEVLGMSDR 464 Query: 486 ILMMKDGRIRKEFARSENLSEAML 509 I++M +G + EF R + E ++ Sbjct: 465 IIVMHEGHLSGEFTREQATQEVLM 488 Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 54/229 (23%), Positives = 112/229 (48%), Gaps = 4/229 (1%) Query: 28 AVNQVSMNIRLGEIRGLIGENGSGKSTISAMMSGLLPATGGDMRIAGALYRPKSTLDARE 87 VN VS +R GEI G+ G G+G++ + ++ G LP T G + + G +S D Sbjct: 267 GVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQDGLA 326 Query: 88 HKVSMIVQE---TGTIPELSIAENMFLGEEKRFVKRG-FVDHKRMNQEAKRALELIDLHE 143 + + I ++ G + +S+ ENM L + F + G + H Q + L ++ Sbjct: 327 NGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNVKT 386 Query: 144 LDVTRPMYTLGFEQRKLIEIARALYYDPTLFIVDETTTALSHEGRVLIHQIMRRLRDQNK 203 + + + L ++ + IAR L P + I+DE T + + I+Q++ + + Sbjct: 387 PSMEQAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKADGL 446 Query: 204 AVLFISHDLPELMEVCDVLTVMRDGNLITTIEKQDFNENHIKQSMVGRV 252 +++ +S ++PE++ + D + VM +G+L ++ + + + VG++ Sbjct: 447 SIILVSSEMPEVLGMSDRIIVMHEGHLSGEFTREQATQEVLMAAAVGKL 495 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.318 0.136 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 35,088,958 Number of extensions: 1504031 Number of successful extensions: 12610 Number of sequences better than 1.0e-05: 1934 Number of HSP's gapped: 10043 Number of HSP's successfully gapped: 2734 Length of query: 514 Length of database: 38,378,431 Length adjustment: 111 Effective length of query: 403 Effective length of database: 25,576,357 Effective search space: 10307271871 Effective search space used: 10307271871 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 118 (50.1 bits)