BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0261.0006.p
         (937 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAC0910 [G] COG2730 Endoglucanase                                      97   2e-19
CAC1556 [R] COG3858 Predicted glycosyl hydrolase                       53   2e-06

>CAC0910 [G] COG2730 Endoglucanase
          Length = 1483

 Score = 96.7 bits (239), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/128 (39%), Positives = 81/128 (63%), Gaps = 9/128 (7%)

Query: 800 VQYRTTDTNPGDSQLRPQLRIVNNGTTAVELSKLKLRYYYTVDGDKAQQFNVDYATVGSG 859
           +Q+  T+T+   + + P+ +I NN    ++L+ LKLRYY+T DG + + F  D+A + +G
Sbjct: 39  IQFADTNTSTTMNTIAPKFKITNNTGAPLDLTTLKLRYYFTADGTQDENFWCDHAGMLNG 98

Query: 860 --------NVLGSFVKLVPAATGADYYVEISFSPAAGSLAPGANTGEIQLRINKTDWSNY 911
                   NV+G+FV +  A   AD+Y+EISFS  AG L  G++  E+Q R+ K DWSNY
Sbjct: 99  YNYQTITSNVVGTFVAMDNATATADHYLEISFSNGAGQLDAGSSL-EVQCRVAKNDWSNY 157

Query: 912 NETGDYSY 919
           +++ DYS+
Sbjct: 158 DQSNDYSF 165


>CAC1556 [R] COG3858 Predicted glycosyl hydrolase
          Length = 446

 Score = 53.1 bits (126), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 1/89 (1%)

Query: 717 VALSWNKVRGADSYTVKRATISGGPYTALGNVTQATYSDTRVVNDTTYYYVVSATNTAGT 776
           ++LSW  V GA  Y + RA  S   Y+ L  V+  TY +T + + T Y+Y V A N+ G 
Sbjct: 54  ISLSWQTVSGASGYRIYRAISSDSNYSLLATVSTNTYKNTSLSSGTKYWYFVRAYNSYGI 113

Query: 777 SPDSPEVSAKPTAVPI-PTVGDLVVQYRT 804
           S DS  +S   TA+   P    LV+ + T
Sbjct: 114 SADSTHISVTTTALTTQPASKKLVLGFTT 142


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.312    0.130    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 77,856,019
Number of extensions: 3489437
Number of successful extensions: 6386
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 6384
Number of HSP's successfully gapped: 2
Length of query: 937
Length of database: 38,378,431
Length adjustment: 116
Effective length of query: 821
Effective length of database: 24,999,687
Effective search space: 20524743027
Effective search space used: 20524743027
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 121 (51.2 bits)