BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0260.0013.p (451 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ZterA.2_1 [T] COG2310 Uncharacterized proteins involved in stres... 91 3e-18 ZterA_1 [T] COG2310 Uncharacterized proteins involved in stress ... 91 3e-18 ZterE.2 [T] COG2310 Uncharacterized proteins involved in stress ... 80 7e-15 ZterE [T] COG2310 Uncharacterized proteins involved in stress re... 80 7e-15 >ZterA.2_1 [T] COG2310 Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Length = 162 Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 59/164 (35%), Positives = 82/164 (50%), Gaps = 9/164 (5%) Query: 6 INLVSGSNAKLDEVSMNARVKISCSSSPAELDLSCFMVGADGRVPADDYFIFYNQPADPQ 65 +NL G NA + + R+ +S ++D S F + ADG+V D +FY QP + Sbjct: 1 MNLTPGGNAPVPAQELRVRI-----TSGGQVDASAFRLYADGKVQGDADMVFYGQPRNDD 55 Query: 66 RAVRFEPIDKYSGEFVIDLRALQSSGVEKCVFAATLDGPGTFAEVRGCKISAAAGNTELV 125 V +YS F + L L+ V+K F T DG T + +R I G T LV Sbjct: 56 GTVSLVSEGQYS-TFTVALNRLKPD-VQKIAFTVTCDGGQTVSGLRNLSIDVEQGATGLV 113 Query: 126 FAITE--GKAETSLVLAELYRHGQGFKLRAVGRGFHGGLKPLAE 167 E G+ E +L+L E YR +K R V +GF+GGLKPLAE Sbjct: 114 SGSVELSGRQEAALILGEFYRRNNDWKFRFVAQGFNGGLKPLAE 157 >ZterA_1 [T] COG2310 Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Length = 162 Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 59/164 (35%), Positives = 82/164 (50%), Gaps = 9/164 (5%) Query: 6 INLVSGSNAKLDEVSMNARVKISCSSSPAELDLSCFMVGADGRVPADDYFIFYNQPADPQ 65 +NL G NA + + R+ +S ++D S F + ADG+V D +FY QP + Sbjct: 1 MNLTPGGNAPVPAQELRVRI-----TSGGQVDASAFRLYADGKVQGDADMVFYGQPRNDD 55 Query: 66 RAVRFEPIDKYSGEFVIDLRALQSSGVEKCVFAATLDGPGTFAEVRGCKISAAAGNTELV 125 V +YS F + L L+ V+K F T DG T + +R I G T LV Sbjct: 56 GTVSLVSEGQYS-TFTVALNRLKPD-VQKIAFTVTCDGGQTVSGLRNLSIDVEQGATGLV 113 Query: 126 FAITE--GKAETSLVLAELYRHGQGFKLRAVGRGFHGGLKPLAE 167 E G+ E +L+L E YR +K R V +GF+GGLKPLAE Sbjct: 114 SGSVELSGRQEAALILGEFYRRNNDWKFRFVAQGFNGGLKPLAE 157 >ZterE.2 [T] COG2310 Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Length = 191 Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 57/150 (38%), Positives = 79/150 (52%), Gaps = 17/150 (11%) Query: 35 ELDLSCFMVGADGRVPADDYFIFYNQPADPQRAVRFEPIDKYSGE-------FVIDLRAL 87 +LD S F VG DG+V +D +FIF+N P AV + D +GE IDL + Sbjct: 40 DLDASVFAVGEDGKVLSDAHFIFFNNKTSPDGAVEHQG-DNRTGEGDGDDEQVKIDLTKV 98 Query: 88 QSSGVEKCVFAATL-DGPG---TFAEVRGC--KISAAAGNTELV-FAITE-GKAETSLVL 139 S+ ++K VFA T+ D F V ++ TE+ F ++E ET++V Sbjct: 99 -SADIKKLVFAVTIYDAEARKQNFGMVSNSFMRVYNNDNGTEIARFDLSEDASTETAMVF 157 Query: 140 AELYRHGQGFKLRAVGRGFHGGLKPLAEAH 169 ELYRHG +K +AVG+GF GGL LA H Sbjct: 158 GELYRHGTEWKFKAVGQGFAGGLSALASQH 187 Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 57/150 (38%), Positives = 79/150 (52%), Gaps = 17/150 (11%) Query: 35 ELDLSCFMVGADGRVPADDYFIFYNQPADPQRAVRFEPIDKYSGE-------FVIDLRAL 87 +LD S F VG DG+V +D +FIF+N P AV + D +GE IDL + Sbjct: 40 DLDASVFAVGEDGKVLSDAHFIFFNNKTSPDGAVEHQG-DNRTGEGDGDDEQVKIDLTKV 98 Query: 88 QSSGVEKCVFAATL-DGPG---TFAEVRGC--KISAAAGNTELV-FAITE-GKAETSLVL 139 S+ ++K VFA T+ D F V ++ TE+ F ++E ET++V Sbjct: 99 -SADIKKLVFAVTIYDAEARKQNFGMVSNSFMRVYNNDNGTEIARFDLSEDASTETAMVF 157 Query: 140 AELYRHGQGFKLRAVGRGFHGGLKPLAEAH 169 ELYRHG +K +AVG+GF GGL LA H Sbjct: 158 GELYRHGTEWKFKAVGQGFAGGLSALASQH 187 >ZterE [T] COG2310 Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 Length = 191 Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 57/150 (38%), Positives = 79/150 (52%), Gaps = 17/150 (11%) Query: 35 ELDLSCFMVGADGRVPADDYFIFYNQPADPQRAVRFEPIDKYSGE-------FVIDLRAL 87 +LD S F VG DG+V +D +FIF+N P AV + D +GE IDL + Sbjct: 40 DLDASVFAVGEDGKVLSDAHFIFFNNKTSPDGAVEHQG-DNRTGEGDGDDEQVKIDLTKV 98 Query: 88 QSSGVEKCVFAATL-DGPG---TFAEVRGC--KISAAAGNTELV-FAITE-GKAETSLVL 139 S+ ++K VFA T+ D F V ++ TE+ F ++E ET++V Sbjct: 99 -SADIKKLVFAVTIYDAEARKQNFGMVSNSFMRVYNNDNGTEIARFDLSEDASTETAMVF 157 Query: 140 AELYRHGQGFKLRAVGRGFHGGLKPLAEAH 169 ELYRHG +K +AVG+GF GGL LA H Sbjct: 158 GELYRHGTEWKFKAVGQGFAGGLSALASQH 187 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.320 0.138 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 28,533,978 Number of extensions: 1118332 Number of successful extensions: 1736 Number of sequences better than 1.0e-05: 21 Number of HSP's gapped: 1713 Number of HSP's successfully gapped: 21 Length of query: 451 Length of database: 38,378,431 Length adjustment: 110 Effective length of query: 341 Effective length of database: 25,691,691 Effective search space: 8760866631 Effective search space used: 8760866631 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 117 (49.7 bits)