BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0254.0036.p
         (733 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAC0910 [G] COG2730 Endoglucanase                                      60   1e-08

>CAC0910 [G] COG2730 Endoglucanase
          Length = 1483

 Score = 60.5 bits (145), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 3/82 (3%)

Query: 14   DSIISPVSAAFDKKQTQQADVTIELTLNGNTLIGISNGIAN-LTAGTDYTLSGSTVTISK 72
            +S+++  S  +D+   Q  D  + +TLNGNT+  + +   N L AG+DYT++   +T+S+
Sbjct: 1006 NSVVNTSSVTYDQNAPQ--DQAVSITLNGNTITDVKDASGNTLKAGSDYTVTSDGITLSQ 1063

Query: 73   TYLASLAAGTTSLTFRFSAGAA 94
            +YLA+LAAGT + T  FSAG A
Sbjct: 1064 SYLATLAAGTYTYTVDFSAGNA 1085



 Score = 58.5 bits (140), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 2/82 (2%)

Query: 11  PELDSIISPVSAAFDKKQTQQADVTIELTLNGNTLIGISNGIANLTAGTDYTLSGSTVTI 70
           P +D +I+P +A FD       DV + + LNG TL G+++         +YT+SGS + +
Sbjct: 192 PVVDPVITPTTATFDTAN--PTDVNVAMQLNGFTLSGLTDENGTAVDAANYTISGSNLVL 249

Query: 71  SKTYLASLAAGTTSLTFRFSAG 92
           SK YLA LA G  S  F F+ G
Sbjct: 250 SKAYLAKLALGKHSFNFNFAKG 271



 Score = 57.0 bits (136), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 3/81 (3%)

Query: 15  SIISPVSAAFDKKQTQQADVTIELTLNGNTLIGISNGIAN-LTAGTDYTLSGSTVTISKT 73
           S+++  S  +D+   Q  D  + +T NGNT+  + +   N L AG+DYT +   +T+S++
Sbjct: 764 SVVNTSSVTYDQNAPQ--DQAVSITFNGNTVKDVKDASGNTLKAGSDYTATSDGITLSQS 821

Query: 74  YLASLAAGTTSLTFRFSAGAA 94
           YLA+LAAGT + T  FSAG A
Sbjct: 822 YLATLAAGTYTYTIDFSAGNA 842



 Score = 55.5 bits (132), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 54/83 (65%), Gaps = 3/83 (3%)

Query: 13   LDSIISPVSAAFDKKQTQQADVTIELTLNGNTLIGISNGIAN-LTAGTDYTLSGSTVTIS 71
            ++S ++  S  +D    Q  D  + +TLNGNT+  + +  A+ L AG+DYT++   +T+S
Sbjct: 1248 VNSSVNTSSVTYDPAAPQ--DQAVSVTLNGNTITDVKDANASVLKAGSDYTVTSDGITLS 1305

Query: 72   KTYLASLAAGTTSLTFRFSAGAA 94
            ++YLA+LAAGT + T  FSAG A
Sbjct: 1306 QSYLATLAAGTYTYTVDFSAGNA 1328



 Score = 50.8 bits (120), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)

Query: 17  ISPVSAAFDKKQTQQADVTIELTLNGNTLIGISNGIANLTAGTDYTLSGS-TVTISKTYL 75
           + P S  FDK   Q  D  + L LNG+TL  +     NL  GTDYT++   TVT SK YL
Sbjct: 291 VDPASVVFDKVAPQ--DENVALKLNGHTLGDVVGPKGNLVKGTDYTVADDGTVTFSKAYL 348

Query: 76  ASLAAGTTSLTFRFS 90
           ++L  G  ++TF+ S
Sbjct: 349 STLPLGDQTITFKAS 363


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.311    0.127    0.348 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 47,837,927
Number of extensions: 1909717
Number of successful extensions: 3917
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 3911
Number of HSP's successfully gapped: 7
Length of query: 733
Length of database: 38,378,431
Length adjustment: 114
Effective length of query: 619
Effective length of database: 25,230,355
Effective search space: 15617589745
Effective search space used: 15617589745
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 120 (50.8 bits)