BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0251.0001.p
         (198 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BMEII0841 [S] COG1434 Uncharacterized conserved protein                70   3e-12
AGl1446 [I] COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid...    69   4e-12
AGl144 [S] COG1434 Uncharacterized conserved protein                   69   4e-12
AGl1448 [I] COG2084 3-hydroxyisobutyrate dehydrogenase and relat...    69   4e-12
Cgl2946 [S] COG1434 Uncharacterized conserved protein                  62   7e-10

>BMEII0841 [S] COG1434 Uncharacterized conserved protein
          Length = 180

 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 64/108 (59%), Gaps = 11/108 (10%)

Query: 29  RQADIIIVLSG-GAGRSEKGAELYKEGYTQNILLSNAKESASNSGDML---QTALALGIP 84
           R AD+IIV  G GA R+ + A+L+K+G +  IL       A+  GD L      +A G+P
Sbjct: 6   RPADVIIVPGGDGAPRAAQAAQLWKDGRSPYIL-------ATGDGDCLLNKHIMMAKGVP 58

Query: 85  KDAILTEKAALSTYQNAKLTLPIMKQHGFTSAIVVSSDFHMRRAKILF 132
             AIL E  + ST+QNA+ + P++++    SA++V++ FH RRA   F
Sbjct: 59  PSAILVECRSGSTWQNARFSAPLLRRLHAKSALIVTNWFHSRRAVASF 106


>AGl1446 [I] COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
          Length = 211

 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 5/123 (4%), Positives = 15/123 (12%), Gaps = 7/123 (5%)

Query: 18  AGRLLLIHQAPRQADIIIVLSG-GAGRSEKGAELYKEGYTQNILLSNAKESASNSGDMLQ 76
                      +   I++              E       +   +               
Sbjct: 80  GLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRKTANVVLNTAF-----GWPT 134

Query: 77  TALAL-GIPKDAILTEKAALSTYQNAKLTLPIMKQHGFTSAIVVSSDFHMRRAKILFDHV 135
            A+                 +  Q  +  L ++                           
Sbjct: 135 IAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLILHGRYTCIARKPRC 194

Query: 136 YKH 138
              
Sbjct: 195 GSC 197


>AGl144 [S] COG1434 Uncharacterized conserved protein
          Length = 134

 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 0/123 (0%), Positives = 0/123 (0%), Gaps = 7/123 (5%)

Query: 18  AGRLLLIHQAPRQADIIIVLSG-GAGRSEKGAELYKEGYTQNILLSNAKESASNSGDMLQ 76
           A +        +   ++    G              +   ++++     +          
Sbjct: 80  AHQETSGSGRIQTLRVVARQKGAAVRIDAVFNIQAGQIADKDVIRKGICDI-----IKGA 134

Query: 77  TALAL-GIPKDAILTEKAALSTYQNAKLTLPIMKQHGFTSAIVVSSDFHMRRAKILFDHV 135
                                                                       
Sbjct: 135                                                              194

Query: 136 YKH 138
              
Sbjct: 195     197


>AGl1448 [I] COG2084 3-hydroxyisobutyrate dehydrogenase and related
           beta-hydroxyacid dehydrogenases
          Length = 134

 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 0/123 (0%), Positives = 0/123 (0%), Gaps = 7/123 (5%)

Query: 18  AGRLLLIHQAPRQADIIIVLSG-GAGRSEKGAELYKEGYTQNILLSNAKESASNSGDMLQ 76
           A +        +   ++    G              +   ++++     +          
Sbjct: 80  AHQETSGSGRIQTLRVVARQKGAAVRIDAVFNIQAGQIADKDVIRKGICDI-----IKGA 134

Query: 77  TALAL-GIPKDAILTEKAALSTYQNAKLTLPIMKQHGFTSAIVVSSDFHMRRAKILFDHV 135
                                                                       
Sbjct: 135                                                              194

Query: 136 YKH 138
              
Sbjct: 195     197


>Cgl2946 [S] COG1434 Uncharacterized conserved protein
          Length = 188

 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 9/114 (7%)

Query: 28  PRQADIIIVLSGGA-GRSEKGAELYKEGYTQNILLSNAKESASNSGDMLQTALALGI--P 84
           P++ D+++VL+G + GR E GAEL +EGY  N ++SN     S S D +  A   G   P
Sbjct: 38  PKKVDVVLVLAGSSDGRHEYGAELVEEGYASNYVVSN----PSGSKDKVGYAHCAGKSRP 93

Query: 85  KDA--ILTEKAALSTYQNAKLTLPIMKQHGFTSAIVVSSDFHMRRAKILFDHVY 136
           K+A     +   + T   A+    + K+ G+ S +VV+S  H +R + +FD  Y
Sbjct: 94  KNAESFCMDPYPVITSGEARTFNELAKKEGWESVLVVTSRTHTQRVRTMFDQCY 147


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.317    0.133    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 13,202,358
Number of extensions: 486040
Number of successful extensions: 1266
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 1267
Number of HSP's successfully gapped: 9
Length of query: 198
Length of database: 38,378,431
Length adjustment: 101
Effective length of query: 97
Effective length of database: 26,729,697
Effective search space: 2592780609
Effective search space used: 2592780609
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)