BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0231.0074.p (326 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BS_yrpG [C] COG0667 Predicted oxidoreductases (related to aryl-a... 427 e-120 XF1724 [C] COG0667 Predicted oxidoreductases (related to aryl-al... 344 1e-94 XF1723 [C] COG0667 Predicted oxidoreductases (related to aryl-al... 330 2e-90 lin2113 [C] COG0667 Predicted oxidoreductases (related to aryl-a... 201 1e-51 mll8386 [C] COG0667 Predicted oxidoreductases (related to aryl-a... 186 3e-47 >BS_yrpG [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Length = 346 Score = 427 bits (1099), Expect = e-120, Method: Compositional matrix adjust. Identities = 23/316 (7%), Positives = 62/316 (19%) Query: 11 MKVSRLCLGTMNFGPITDEKEAFRIMDAALDAGINFFDTANVYGWGENSGLTETIIGRWF 70 M+ R+ ++ + F ++ DA + + R Sbjct: 1 MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPE 60 Query: 71 KQGGGRREKVVLATKVYGAMSDKLDGPNDEHGLSSYIIRRHLEGSLQRLQTDHIELYQMH 130 QG K + ++ R + ++ + + Sbjct: 61 TQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKR 120 Query: 131 HVDRSVSWDELWSAFELAVSQGKIGYVGSSNFAGWDIAVAQQEAKARGFLGLVSEQHKYS 190 + ++ GK+GY + + + G + + Sbjct: 121 LQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSN 180 Query: 191 LTCRLPELEVLPASRSLGLGVIPWSPLDGGLLGRNALKKIEGSRSGGNAERVEQYKSQLE 250 T + A + ++ L + E S+ G Sbjct: 181 ETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGT 240 Query: 251 AFAELSLELGEPQDNIALAWLLANPAVTAPIIGPRTLEQFESALRSLEVLLDESVLKRLD 310 + L + + + ++R Sbjct: 241 LTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQP 300 Query: 311 EIFXXXXXXXXXXYAW 326 + Sbjct: 301 FVASTLLGATTMDQLK 316 >XF1724 [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Length = 346 Score = 344 bits (882), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 52/334 (15%), Positives = 86/334 (25%), Gaps = 13/334 (3%) Query: 1 VQYAKLGKSGMKVSRLCLGTMNFGPITDEKEAFRIMDAALDAGINFFDTANVYGWGENS- 59 +QY ++ S ++VS L LGTM FG E +A +D A+ GIN D A +Y Sbjct: 1 MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPE 60 Query: 60 -----GLTETIIGRWFKQGGGRREKVVLATKVYGAMSDKLDGPNDEHGLSSYIIRRHLEG 114 ++ D+ L IR L Sbjct: 61 TQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKG---IRPDQA-LDRKNIREALHD 116 Query: 115 SLQRLQTDHIELYQMHHVDRSVSWDELWSAFELAVSQGKIGYVGSSNFAGWDIAVAQQEA 174 SL+RLQTD+++LYQ+H R + + A + A + Sbjct: 117 SLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYI 176 Query: 175 KARGFLGLVSEQHKYSLTCRLPELEVLPASRSLGLGVIPWSPLDGGLLGRNALKKIEGSR 234 ++ + V + L L ++ + S Sbjct: 177 GVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQY-EGVELLAYSC 235 Query: 235 --SGGNAERVEQYKSQLEAFAELSLELGEPQDNIALAWLLANPAVTAPIIGPRTLEQFES 292 G + A L + A + Sbjct: 236 LGFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAF 295 Query: 293 ALRSLEVLLDESVLKRLDEIFXXXXXXXXXXYAW 326 R V +D++ Sbjct: 296 VRRQPFVASTLLGATTMDQLKTNIESLHLELSED 329 >XF1723 [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Length = 346 Score = 330 bits (846), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 0/331 (0%), Positives = 0/331 (0%), Gaps = 11/331 (3%) Query: 3 YAKLGKSGMKVSRLCLGTMNFGPITDEKEAFRIMDAALDAGINFFDTANVYGWGENS--- 59 G+ + + + + L + S Sbjct: 36 LDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNN 95 Query: 60 ---GLTETIIGRWFKQGGGRREKVVLATKVYGAMSDKLDGPNDEHGLSSYIIRRHLEGSL 116 + + R + L T + + + Sbjct: 96 DKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQV---HWPQRP-TNCFGKLGYSWTDS 151 Query: 117 QRLQTDHIELYQMHHVDRSVSWDELWSAFELAVSQGKIGYVGSSNFAGWDIAVAQQEAKA 176 + L + R+ + + E A + ++ + + + + Sbjct: 152 APAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLL 211 Query: 177 RGFLGLVSEQHKYSLTCRLPELEVLPASRSLGLGVIPWSPLDGGLLGRNALKKIEGSR-S 235 + + L L G + P + + G + Sbjct: 212 NRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQ 271 Query: 236 GGNAERVEQYKSQLEAFAELSLELGEPQDNIALAWLLANPAVTAPIIGPRTLEQFESALR 295 A V+ + A+++L Q +A L A + + Sbjct: 272 KAVAAYVDIARRHGLDPAQMALAFVRRQPFVASTLLGATTMDQLKTNIESLHLELSEDVL 331 Query: 296 SLEVLLDESVLKRLDEIFXXXXXXXXXXYAW 326 Sbjct: 332 362 >lin2113 [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Length = 346 Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 24/328 (7%), Positives = 66/328 (20%), Gaps = 25/328 (7%) Query: 1 VQYAKLGKSGMKVSRLCLGTMNFGP--------ITDEKEAFRIMDAALDAGINFFDTANV 52 +QY ++ S ++VS L LGTM FG + + ++ A + Sbjct: 1 MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPE 60 Query: 53 YGWGENSGLTETIIGRWFKQGGGRREKVVLATKVYGAMSDKLDGPNDEHGLSSYIIRRHL 112 + K G + ++ + + D + Sbjct: 61 TQGLT----ETYVGNWLAKHGSRE-KLIIASKVSGPSR--NNDKGI-RPDQALDRKNIRE 112 Query: 113 EGSLQRLQTDHIELYQMHHVDRSVSWDELWSAFELAVSQGKIGYVGSSNFAGWDIAVAQQ 172 + L + + + A + A + Sbjct: 113 ALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGK 172 Query: 173 EAKARGFLGLVSEQHKYSLTCRLPELEVLPASRSLGLGVIPWSPLDGGLLGRNALKKIEG 232 +Y +L + ++ + + + + ++ Sbjct: 173 IRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVEL-- 230 Query: 233 SRSGGNAERVEQY-------KSQLEAFAELSLELGEPQDNIALAWLLANPAVTAPIIGPR 285 + + + A + + Sbjct: 231 LAYSCLGFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQ 290 Query: 286 TLEQFESALRSLEVLLDESVLKRLDEIF 313 F + L + + Sbjct: 291 MALAFVRRQPFVASTLLGATTMDQLKTN 318 >mll8386 [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Length = 346 Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 34/325 (10%), Positives = 74/325 (22%), Gaps = 23/325 (7%) Query: 1 VQYAKLGKSGMKVSRLCLGTMNFG---PI-----TDEKEAFRIMDAALDAGINFFDTANV 52 +QY ++ S ++VS L LGTM FG + + ++ A + Sbjct: 1 MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPE 60 Query: 53 YGWGENSGLTETIIGRWFKQGGGRREKVVLATKVYGAMSDKLDGPNDEHGLSSYIIRRHL 112 + G REK+++A+KV G + + R+++ Sbjct: 61 T----QGLTETYVGNWLA--KHGSREKLIIASKVSGPSRN---NDKGI-RPDQALDRKNI 110 Query: 113 EGSLQRLQTDHIELYQMHHVDRSVSWDELWSAFELAVSQGKIGYVGSSNFAGWDIAVAQQ 172 +L Y + V + + Sbjct: 111 REALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRA 170 Query: 173 EAKARGFLGLVSEQHKYSLTCRLPELEVLPASRSLGLGVIPWSPLDGGLLGRNALKKIEG 232 + + + ++ + + GL + + +E Sbjct: 171 GKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVEL 230 Query: 233 SRS-GGNAERVEQYKSQLEAFAELSLELGEPQD----NIALAWLLANPAVTAPIIGPRTL 287 + A L + A + Sbjct: 231 LAYSCLGFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQ 290 Query: 288 EQFESALRSLEVLLDESVLKRLDEI 312 R V +D++ Sbjct: 291 MALAFVRRQPFVASTLLGATTMDQL 315 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.317 0.136 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 24,104,324 Number of extensions: 1045463 Number of successful extensions: 26856 Number of sequences better than 1.0e-05: 6318 Number of HSP's gapped: 8006 Number of HSP's successfully gapped: 6318 Length of query: 326 Length of database: 38,378,431 Length adjustment: 107 Effective length of query: 219 Effective length of database: 26,037,693 Effective search space: 5702254767 Effective search space used: 5702254767 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 116 (49.3 bits)