BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0231.0063.p
         (153 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mll2222 [KR] COG0454 Histone acetyltransferase HPA2 and related ...    51   8e-07
PA0483 [KR] COG0454 Histone acetyltransferase HPA2 and related a...    48   5e-06
BH1583 [R] COG0456 Acetyltransferases                                  48   5e-06

>mll2222 [KR] COG0454 Histone acetyltransferase HPA2 and related
           acetyltransferases
          Length = 301

 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 3/76 (3%), Positives = 12/76 (15%)

Query: 61  LGFVHFMLHGDLLYIDMLAIAPAARRKRWGNMLMDRAERFALSRGCLRAKISVDAGNAPG 120
              +      + L     + +          +   R             +       A  
Sbjct: 65  GLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVN 124

Query: 121 ISFYQKLGYSVARYQP 136
                +    +  +  
Sbjct: 125 KVDNVQEKADLLPHLQ 140


>PA0483 [KR] COG0454 Histone acetyltransferase HPA2 and related
           acetyltransferases
          Length = 147

 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 48/104 (46%), Gaps = 9/104 (8%)

Query: 34  NQIRKDLPRRLGQG-VTLVACPDYESDPLGFVHF-------MLHGDLLYIDMLAIAPAAR 85
            Q+R  L  RL QG  TL    D E+  LGFV          L    L  D L + P AR
Sbjct: 32  EQVRAFLAERLRQGDSTLFLARDAEARALGFVQLYPLFASLALRPSWLLSD-LYVRPEAR 90

Query: 86  RKRWGNMLMDRAERFALSRGCLRAKISVDAGNAPGISFYQKLGY 129
           R+  G  LM++A  FA S G    ++     N  G S Y++LGY
Sbjct: 91  RRGVGEALMNQARGFAESMGACGLQLETAKTNHAGQSLYERLGY 134


>BH1583 [R] COG0456 Acetyltransferases
          Length = 158

 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 1/102 (0%)

Query: 29  PQTVINQIRKDLPRRLGQGVTLVACPDYESDPLGFVHFMLHGDLLYIDMLAIAPAARRKR 88
           P T + +   D+ + L  G T V    +    +G V F++H   LY   L++ P AR + 
Sbjct: 31  PTTALREAVSDIEQELTSG-TQVLLYKHNDKCVGMVKFVVHDKQLYFFRLSVIPEARNQG 89

Query: 89  WGNMLMDRAERFALSRGCLRAKISVDAGNAPGISFYQKLGYS 130
               L+D     A  + C      V A  A  ++FY+ LG++
Sbjct: 90  IARRLIDHLMTLAKEQKCATVVCKVRADMAQNVAFYESLGFA 131


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.327    0.143    0.435 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 11,617,667
Number of extensions: 450136
Number of successful extensions: 885
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 886
Number of HSP's successfully gapped: 3
Length of query: 153
Length of database: 38,378,431
Length adjustment: 97
Effective length of query: 56
Effective length of database: 27,191,033
Effective search space: 1522697848
Effective search space used: 1522697848
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 111 (47.4 bits)