BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0231.0056.p
         (180 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BH2302 [I] COG1607 Acyl-CoA hydrolase                                 162   2e-40
BH0798 [I] COG1607 Acyl-CoA hydrolase                                 142   4e-34
DR0279 [I] COG1607 Acyl-CoA hydrolase                                 110   1e-24
DRB0106 [I] COG1607 Acyl-CoA hydrolase                                 97   2e-20
VNG0873G [I] COG1607 Acyl-CoA hydrolase                                94   1e-19

>BH2302 [I] COG1607 Acyl-CoA hydrolase
          Length = 162

 Score =  162 bits (411), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 78/150 (52%), Positives = 107/150 (71%)

Query: 18  ESRVFKTSRVFPNDVNNHKTLFGGKLMSTIDEVASISAMRHCRTNVVTASADSVDFLLPI 77
           ES    T  V P D N H T+FGG +M+ +D+VASI+AMRHCR  VVTAS+DS+DF+ PI
Sbjct: 9   ESLTVWTDIVLPPDTNYHGTIFGGNVMAYVDKVASIAAMRHCRKQVVTASSDSLDFISPI 68

Query: 78  RPTDSVCFESFVSWTGRTSIEVFVKIISENLYTGERAVAATSFLTFVAVHEDGTPAPVPA 137
           R  +++C E  V++T +TS+EVFV++ +E+L TGER + ATS+LTFVA++ DG PA +P 
Sbjct: 69  RTGEAICLEGIVTYTRKTSMEVFVRVEAEDLLTGERRLTATSYLTFVALNPDGKPAEIPP 128

Query: 138 VVAETDEEKLISASADQRSELRKIRRTSSK 167
           VV  T+EEK     A +R E+R+ RR   K
Sbjct: 129 VVPTTEEEKWHYEGAKERYEIRQRRRQMQK 158


>BH0798 [I] COG1607 Acyl-CoA hydrolase
          Length = 157

 Score =  142 bits (357), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 72/144 (50%), Positives = 96/144 (66%)

Query: 19  SRVFKTSRVFPNDVNNHKTLFGGKLMSTIDEVASISAMRHCRTNVVTASADSVDFLLPIR 78
           SR  +T  V P D N+  T+FGGK+++ IDE+A+++AM+H  + VVTAS DSVDF     
Sbjct: 10  SRTIQTRLVLPPDTNHLGTIFGGKVLAYIDEIAALTAMKHANSAVVTASIDSVDFKSSAT 69

Query: 79  PTDSVCFESFVSWTGRTSIEVFVKIISENLYTGERAVAATSFLTFVAVHEDGTPAPVPAV 138
             D++  E FV+ TGRTS+EV+V++ S NL TGER +   SFLT VAV E G P PVP V
Sbjct: 70  VGDALELEGFVTHTGRTSMEVYVRVHSNNLLTGERTLTTESFLTMVAVDESGKPKPVPQV 129

Query: 139 VAETDEEKLISASADQRSELRKIR 162
             +T+EEK +  +A  R E RK R
Sbjct: 130 EPQTEEEKRLYETAPARKENRKKR 153


>DR0279 [I] COG1607 Acyl-CoA hydrolase
          Length = 222

 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/130 (43%), Positives = 79/130 (60%), Gaps = 1/130 (0%)

Query: 18  ESRVFKTSRVFPNDVNNHKTLFGGKLMSTIDEVASISAMRHCRTNVVTASADSVDFLLPI 77
            SR      VFP D N H T FGG +++ +D+ AS++A+RH   NVVTA  D VDF +PI
Sbjct: 86  RSRARMLELVFPKDTNYHGTAFGGWVLALMDKAASVAAVRHAGGNVVTARMDGVDFHVPI 145

Query: 78  RPTDSVCFESFVSWTGRTSIEVFVKIISENLYTGERAVAATSFLTFVAVHEDGTPAPVPA 137
           R  D+V  ++ V   GR+S+ + V +  EN+ +GE+ +A     TFVA+ EDG P PVP 
Sbjct: 146 RVGDAVALDARVIRVGRSSMTIRVDVYRENMASGEQQLATGGLFTFVALGEDGKPRPVPP 205

Query: 138 VV-AETDEEK 146
           +    TD E+
Sbjct: 206 LPEGSTDSEQ 215


>DRB0106 [I] COG1607 Acyl-CoA hydrolase
          Length = 147

 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/137 (38%), Positives = 78/137 (56%), Gaps = 2/137 (1%)

Query: 4   QNQPQAAPDFKYCRESRVFKTSRVFPNDVNNHKTLFGGKLMSTIDEVASISAMRHCRTNV 63
           Q    AAP      E+R+  T  VFP   N+H TLFGG+ +S +D  A I+A R+CR  V
Sbjct: 10  QGPQGAAPSRPRATETRI--THIVFPGTTNHHGTLFGGEALSMMDSAAFIAATRYCRRKV 67

Query: 64  VTASADSVDFLLPIRPTDSVCFESFVSWTGRTSIEVFVKIISENLYTGERAVAATSFLTF 123
           VT   D+++F  PI     V   + V  TGR+S+ V V++ +E++Y+ +R +  +     
Sbjct: 68  VTRHLDAMEFSRPIPQGSLVELIARVVKTGRSSMTVLVELFTEDMYSEKRELGCSGTFVL 127

Query: 124 VAVHEDGTPAPVPAVVA 140
           VA+  DG P PVPA+ A
Sbjct: 128 VALGADGQPTPVPALEA 144


>VNG0873G [I] COG1607 Acyl-CoA hydrolase
          Length = 155

 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/140 (38%), Positives = 78/140 (55%)

Query: 18  ESRVFKTSRVFPNDVNNHKTLFGGKLMSTIDEVASISAMRHCRTNVVTASADSVDFLLPI 77
           ES    T  + PND NN     GG ++  +D  A+I++MR   +  VTAS D VDF+  I
Sbjct: 9   ESYTEMTEMLLPNDTNNLGRALGGTVLHWMDICAAIASMRFAGSQCVTASMDHVDFITAI 68

Query: 78  RPTDSVCFESFVSWTGRTSIEVFVKIISENLYTGERAVAATSFLTFVAVHEDGTPAPVPA 137
              +    E++V  TG TSI+V V + +E+   G      +SF TFVAV +DG+P PVP 
Sbjct: 69  EMGEVAVVEAYVFDTGSTSIDVKVDVHAEDPREGATRKTTSSFFTFVAVDDDGSPIPVPD 128

Query: 138 VVAETDEEKLISASADQRSE 157
           +  E+D E  + A+A +  E
Sbjct: 129 LACESDAETGLRAAAMEAHE 148


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.317    0.128    0.366 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 11,447,628
Number of extensions: 378195
Number of successful extensions: 790
Number of sequences better than 1.0e-05: 23
Number of HSP's gapped: 787
Number of HSP's successfully gapped: 24
Length of query: 180
Length of database: 38,378,431
Length adjustment: 100
Effective length of query: 80
Effective length of database: 26,845,031
Effective search space: 2147602480
Effective search space used: 2147602480
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)