BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0231.0052.p (413 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CAC1691 [M] COG1215 Glycosyltransferases, probably involved in c... 363 e-100 SSO12256 [M] COG1215 Glycosyltransferases, probably involved in ... 77 4e-14 AGc847 [M] COG1215 Glycosyltransferases, probably involved in ce... 69 2e-11 BMEI1626 [M] COG1215 Glycosyltransferases, probably involved in ... 67 5e-11 Cgl0129 [M] COG1215 Glycosyltransferases, probably involved in c... 65 3e-10 >CAC1691 [M] COG1215 Glycosyltransferases, probably involved in cell wall biogenesis Length = 289 Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust. Identities = 0/402 (0%), Positives = 0/402 (0%), Gaps = 10/402 (2%) Query: 16 IAVYQFTFSLFGLHKKKNKAQFAPQKSFAVLVAAHNEEEVVGALMENLKQLNYPRELYDV 75 +++ + + + L Sbjct: 22 LSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSKSAVALRLTARPILDIALQYR 81 Query: 76 FVICDNCTDGTARIVREHGMNACVRTNTNLRGKGYAIEWMLKELWAMPRQYDAVVMFDAD 135 F T + + + G + + Sbjct: 82 FDSQQTFTRAFKKQFAQTPALYRRSPEWSAFGIRPPLRLGEFTMPEHKFVTLEDTPLIGV 141 Query: 136 NLAHTEFLTEMNNDLCSGAKVIQGYIDTKNPEDSWITAAYGVSYWYINRLWQLSRHNLNM 195 +++ L ++++ P + + ++ + Sbjct: 142 TQSYSCSLEQISDFRHEMRYQFWHDFLGNAPTIPPVLYGLNETRPSQDKDDEQEVFYTTA 201 Query: 196 ANFLGGTGMCFETNLLKEMGWGATSLVEDLEFTMRSASKGVYPKFNYDAKVFDEKPLTFK 255 G + + G + T + Sbjct: 202 LAQDQADGYVLTGHPVMLQGGEYVMFTYEGLGTGVQEFILTVYGTCMPMLNLTRRKGQDI 261 Query: 256 ASSRQRLRWMQGHFTVARRYFFPLLWQSIKERSLTKFDLALYGANVYIVLLTFLMTAVMW 315 Sbjct: 262 321 Query: 316 VDNSMFGGPHI------ANIYGQLPLWLSYF--AVGANILT-FLLAMALEXXXXXXXXXX 366 Sbjct: 322 - 380 Query: 367 XXXXXXXXISWYPITFYAFFTQNNKQWSHTKHTRVVRLEEVQ 408 Sbjct: 381 422 >SSO12256 [M] COG1215 Glycosyltransferases, probably involved in cell wall biogenesis Length = 289 Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 5/237 (2%), Positives = 28/237 (11%), Gaps = 19/237 (8%) Query: 46 LVAAHNEEEVVGALMENLKQLNYPRELYDVFVICDNCTDGTARIVREHGM--NACVRTNT 103 A + ++ + L+ + + R + Sbjct: 2 DQAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSK 61 Query: 104 NLR-----GKGYAIEWMLKELWAMPRQYDAVVMFDADNLAHTEFLTEMN---NDLCSGAK 155 + + + Sbjct: 62 SAVALRLTARPILDIALQY-----RFDSQQTFTRAFKKQFAQTPALYRRSPEWSAFGIR- 115 Query: 156 VIQGYIDTKNPEDSWITAAYGVSYWYINRLWQLSRHNLNMANFLGGTGMCFETNLLKEMG 215 + + + + L Sbjct: 116 -PPLRLGEFTMPEH-KFVTLEDTPLIGVTQSYSCSLEQISDFRHEMRYQFWHDFLGNAPT 173 Query: 216 -WGATSLVEDLEFTMRSASKGVYPKFNYDAKVFDEKPLTFKASSRQRLRWMQGHFTV 271 + + + + A+ + + + Sbjct: 174 IPPVLYGLNETRPSQDKDDEQEVFYTTALAQDQADGYVLTGHPVMLQGGEYVMFTYE 230 >AGc847 [M] COG1215 Glycosyltransferases, probably involved in cell wall biogenesis Length = 645 Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/235 (24%), Positives = 101/235 (42%), Gaps = 18/235 (7%) Query: 43 FAVLVAAHNEEEVVGALMENLKQLNYPRELYDVFVICDNCTDGTARIVRE----HGMNAC 98 + +LVA + EE V+ L+ L++L++PR D+ ++C+ T +R M Sbjct: 273 YTILVALYREEAVIEQLVSALERLDWPRSRLDIKLVCEADDGATIEAIRRINPGPHMEIV 332 Query: 99 VRTNTNLRGKGYAIEWMLKELWAMPRQYDAVVMFDADNLAHTEFLTEMN---NDLCSGAK 155 + R K A+ + L + VV++DA++ H + L E + Sbjct: 333 QVPPSEPRTKPKALTYALSGA-----RGTFVVVYDAEDRPHPQQLREAYAAFRNQPEDMA 387 Query: 156 VIQGYIDTKNPEDSWITAAYGVSYWYINR--LWQLSRHNLNMANFLGGTGMCFETNLLKE 213 +Q + N SW++A + + Y + R L L+ H L + LGGT F T L+ Sbjct: 388 CVQAPLIISNASSSWLSACFALEYAGLFRCMLPALATHGLPLP--LGGTSNHFRTAALRR 445 Query: 214 MG-WGATSLVEDLEFTMRSASKGVYPKFNYDAKVFDEKPLTFKASSRQRLRWMQG 267 G W ++ ED + +R G Y + ++ P + QR RW +G Sbjct: 446 AGAWDPYNVTEDADLGLRLHRLG-YRCGVIRRQTLEDAPTSLPVWLNQRTRWFKG 499 >BMEI1626 [M] COG1215 Glycosyltransferases, probably involved in cell wall biogenesis Length = 289 Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 0/254 (0%), Positives = 0/254 (0%), Gaps = 38/254 (14%) Query: 35 AQFAPQ--KSFAVLVAAHNEEEVVGALMENLKQLNYPRELYDVFVICDNCTDGTARIVRE 92 L + + + N P ++ + + +E Sbjct: 136 TPLIGVTQSYSCSLEQISDFRHEMRYQFWHDFLGNAPTIPPVLYGLNETRPSQDKDDEQE 195 Query: 93 HGMNACVR--------TNTNLRGKGYAIEWMLKELWAMPRQYDAVVMFDADNLAHTEFLT 144 + + M + T + T Sbjct: 196 VFYTTALAQDQADGYVLTGHPVMLQGGEYVMFTYE---------GLGTGVQEFILTVYGT 246 Query: 145 EMNNDLCSGAK---VIQGYIDTKNPEDSWITAAYGVSYWYINR--LWQLSRHNLNMANFL 199 M + K + + Y I R Sbjct: 247 CMPMLNLTRRKGQDIERYYPAEDAKAGDRPINLRCELLIPIRR-- 304 Query: 200 GGTGMCFETNLLKEM-GWGATSLVEDLEFTMRSASKGVYPKFNYDAKV-----FDEKPLT 253 Sbjct: 305 ------ 358 Query: 254 FKASSRQRLRWMQG 267 Sbjct: 359 372 >Cgl0129 [M] COG1215 Glycosyltransferases, probably involved in cell wall biogenesis Length = 289 Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 0/298 (0%), Positives = 0/298 (0%), Gaps = 39/298 (13%) Query: 41 KSFAVLVAAHNEEEVVGALMENLKQLNYPRELYDVFVICDNCTDGTARIVREHGMNAC-- 98 + + H + + + Q + + Sbjct: 119 RLGEFTMPEHKFVTLEDTPLIGVTQSYSCSLEQISDFRHEMRYQFWHDFLGNAPTIPPVL 178 Query: 99 ------VRTNTNLRGKGYAIEWMLKELWAMPRQYDAVVMFDADNLAH--------TEFLT 144 + + L + F Sbjct: 179 YGLNETRPSQDKDDEQEVFYTTALAQD---------QADGYVLTGHPVMLQGGEYVMFTY 229 Query: 145 EMNNDLCSGAKVIQGYIDTKNPEDSWITAAYGVSY--WYINRLWQLSRHNLNMANFLGGT 202 E + + + + + L Sbjct: 230 EGLGTGV-----QEFILTVYGTCMPMLNLTRRKGQDIERYYPAEDAKAGDRPIN--LRCE 282 Query: 203 GMCFETNLLKEMG-WGATSLVEDLEFTMRSASKGVYPKFNYDAKVFDEKPLTFKASSRQR 261 Sbjct: 283 - 341 Query: 262 LRWMQGHFTVARRYFFPLLW--QSIKERSLTKFDLALYGANVYIVL-LTFLMTAVMWV 316 Sbjct: 342 399 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.324 0.136 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 29,043,284 Number of extensions: 1097432 Number of successful extensions: 2903 Number of sequences better than 1.0e-05: 11 Number of HSP's gapped: 2903 Number of HSP's successfully gapped: 11 Length of query: 413 Length of database: 38,378,431 Length adjustment: 109 Effective length of query: 304 Effective length of database: 25,807,025 Effective search space: 7845335600 Effective search space used: 7845335600 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 117 (49.7 bits)