BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0231.0020.p
         (152 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1816 [KR] COG0454 Histone acetyltransferase HPA2 and related ...   104   5e-23
PA0483 [KR] COG0454 Histone acetyltransferase HPA2 and related a...    99   2e-21
PM1312 [KR] COG0454 Histone acetyltransferase HPA2 and related a...    66   2e-11

>RSc1816 [KR] COG0454 Histone acetyltransferase HPA2 and related
           acetyltransferases
          Length = 148

 Score =  104 bits (260), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 56/140 (40%), Positives = 80/140 (57%), Gaps = 3/140 (2%)

Query: 11  QDLELAAPLFNDYRVFYGQQPDLAGAHQFLEARMDNKESALFIAVTGEGAYRQAGGFAQL 70
           +DL     LFNDYRVFY Q  D+  A +F+  R++  ES +F+A  G  A     GF QL
Sbjct: 9   RDLGEIIRLFNDYRVFYEQDSDIKLAERFIRERIEGDESLIFVADAGNNAL---VGFCQL 65

Query: 71  YPSFSSVTMQRVWILNDLFVAAEQRGKGLGSLLLTGVREFARDTGAKGLELTTMTNNTGA 130
           YP+F SV    +++L DLFV+   R +G+   LL      A+  G   ++LTT   N  A
Sbjct: 66  YPTFCSVAAAPIYVLYDLFVSPTVRRQGIAKQLLQAAAYQAKVDGKARIDLTTGKQNVNA 125

Query: 131 QRLYEAHGYSREDEFFSYHL 150
           Q LYE  G+ R++ F++Y+L
Sbjct: 126 QALYEMLGWKRDERFYTYNL 145


>PA0483 [KR] COG0454 Histone acetyltransferase HPA2 and related
           acetyltransferases
          Length = 147

 Score = 99.0 bits (245), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 78/143 (54%), Gaps = 3/143 (2%)

Query: 8   AGVQDLELAAPLFNDYRVFYGQQPDLAGAHQFLEARMDNKESALFIAVTGEGAYRQAGGF 67
           A + DL    PLF+ Y  FY           FL  R+   +S LF+A   E    +A GF
Sbjct: 6   ASLADLADLVPLFSAYLDFYEVPAPEEQVRAFLAERLRQGDSTLFLARDAEA---RALGF 62

Query: 68  AQLYPSFSSVTMQRVWILNDLFVAAEQRGKGLGSLLLTGVREFARDTGAKGLELTTMTNN 127
            QLYP F+S+ ++  W+L+DL+V  E R +G+G  L+   R FA   GA GL+L T   N
Sbjct: 63  VQLYPLFASLALRPSWLLSDLYVRPEARRRGVGEALMNQARGFAESMGACGLQLETAKTN 122

Query: 128 TGAQRLYEAHGYSREDEFFSYHL 150
              Q LYE  GY R+++F++Y L
Sbjct: 123 HAGQSLYERLGYVRDEQFYTYWL 145


>PM1312 [KR] COG0454 Histone acetyltransferase HPA2 and related
           acetyltransferases
          Length = 144

 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 63/131 (48%), Gaps = 10/131 (7%)

Query: 12  DLELAAPLFNDYRVFYG--QQPDLAGAHQFLEARMDNKESALFIAVTGEGAYRQAGGFAQ 69
           +LE   PLF  YR+ +G  + PD   A  FL  R+   ES  FIAV       QA GF Q
Sbjct: 10  NLESLLPLFEQYRLSHGMSENPDRTLA--FLTNRIRFSESIFFIAVDDT---HQALGFIQ 64

Query: 70  LYPSFSSVTMQRVWILNDLFVAAEQRGKGLGSLLLTGVREFARDTGAKGLELTTMTNNTG 129
           LYP  SS+ +QR W L D+FV        + + L+   +EF R T +  L    +     
Sbjct: 65  LYPRLSSLQLQRYWQLTDIFVQDCPYKTEIYAALIAKAKEFVRYTQSTRL---VIEQAPQ 121

Query: 130 AQRLYEAHGYS 140
            Q + EA G+ 
Sbjct: 122 QQAMLEAEGFK 132


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.321    0.137    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 11,747,965
Number of extensions: 458500
Number of successful extensions: 867
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 872
Number of HSP's successfully gapped: 4
Length of query: 152
Length of database: 38,378,431
Length adjustment: 97
Effective length of query: 55
Effective length of database: 27,191,033
Effective search space: 1495506815
Effective search space used: 1495506815
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 111 (47.4 bits)