BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0188.0100.p (822 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BH0103 [O] COG0542 ATPases with chaperone activity, ATP-binding ... 1273 0.0 BS_clpC [O] COG0542 ATPases with chaperone activity, ATP-binding... 1260 0.0 lin0264 [O] COG0542 ATPases with chaperone activity, ATP-binding... 1204 0.0 SA0483 [O] COG0542 ATPases with chaperone activity, ATP-binding ... 1085 0.0 alr2999 [O] COG0542 ATPases with chaperone activity, ATP-binding... 988 0.0 >BH0103 [O] COG0542 ATPases with chaperone activity, ATP-binding subunit Length = 813 Score = 1273 bits (3295), Expect = 0.0, Method: Compositional matrix adjust. Identities = 628/810 (77%), Positives = 702/810 (86%), Gaps = 3/810 (0%) Query: 1 MMFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLIREGDXXXXXXXXXXXXXXXXX 60 MMFGRFTERAQKVLALAQEEA+RLGHNNIGTEHILLGLIREG+ Sbjct: 1 MMFGRFTERAQKVLALAQEEAIRLGHNNIGTEHILLGLIREGEGIAAKALQALGLGPEKI 60 Query: 61 QDEVETLIGRGQEQPTNIAYTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVA 120 Q EVETLIG+GQ+ I YTPRAKKVIELSMDEARKLGH+YVGTEHILLGLIREGEGVA Sbjct: 61 QKEVETLIGKGQDGAKTIHYTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVA 120 Query: 121 ARVLNNLGISLNKARQQVLQLLGSSEATSS--HSGTPANVSTPTLDGLARDLTAYAKDGN 178 ARVLNNLG+SLNKARQQVLQLLGS+E +SS G AN +TPTLD LARDLTA A++ Sbjct: 121 ARVLNNLGVSLNKARQQVLQLLGSNETSSSSQQGGGAANANTPTLDSLARDLTAIAREEG 180 Query: 179 LDPVIGRSKEIERVIQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQKIINNEIPETLRDKR 238 LDPVIGRSKEIERVIQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQ II+NE+PETLR+KR Sbjct: 181 LDPVIGRSKEIERVIQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIIHNEVPETLRNKR 240 Query: 239 VMTLDMGSVVAGTKYRGEFEDRLKKIMDEIRQAGNIVLFIDELHTLXXXXXXXXXXXXSN 298 VMTLDMG+VVAGTKYRGEFEDRLKK+MDEIRQAGN++LFIDELHTL SN Sbjct: 241 VMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASN 300 Query: 299 ILKPALARGELQCIGATTLDEYRKYIEKDAALERRFQPITVDQPSPEEAVQILYGLRDRY 358 ILKP+LARGELQCIGATTLDEYRKYIEKDAALERRFQPI V++PS +E++QIL GLRDRY Sbjct: 301 ILKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVNEPSLDESIQILKGLRDRY 360 Query: 359 EAHHRVKITDEAIVEAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLNSYTIPPNLKELEM 418 EAHHRV ITDEAI EAVKLSDRYI DRFLPDKAIDLIDEA SKVRL SYT PPNLKELE Sbjct: 361 EAHHRVTITDEAIEEAVKLSDRYIQDRFLPDKAIDLIDEAASKVRLRSYTAPPNLKELEQ 420 Query: 419 RLDDIRKEKDSAVQSQEFEKAAALRDTEQKIREELDTTKNQWKEKQGRTDSQVTPEDIAQ 478 +L++ RKEKD+AVQSQEFEKAA+LRD+EQ+IREELD KN WK+KQG+ ++QV +DIAQ Sbjct: 421 KLEETRKEKDAAVQSQEFEKAASLRDSEQRIREELDQMKNDWKQKQGQENTQVVVDDIAQ 480 Query: 479 VVASWTGIPVSKLKEEETDRLLNMEALLHERVIGQDEAVKAVSRALRRARAGLKDPKRPM 538 VVASWTGIPVSKL EEET+RLL ME +LH+RVIGQ+EAVKA+S+A+RRARAGLKDPKRP+ Sbjct: 481 VVASWTGIPVSKLAEEETERLLKMEEILHKRVIGQEEAVKAISKAVRRARAGLKDPKRPI 540 Query: 539 GSFIFLGPTGVGKTELARALAEAMFGDENAVVRIDMSEYMEKHSTSRLVGAPPGYVGYEE 598 GSFIFLGPTGVGKTELARA+AE +FGDE+A +RIDMSEYMEKH+TSRLVG+PPGYVG++E Sbjct: 541 GSFIFLGPTGVGKTELARAVAETLFGDEDAFIRIDMSEYMEKHATSRLVGSPPGYVGHDE 600 Query: 599 GGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTS 658 GGQLTEKVRRKPYSV+LLDEIEKAHPEVFNILLQVLEDGRLTDSKGR VDFRNT +I+TS Sbjct: 601 GGQLTEKVRRKPYSVILLDEIEKAHPEVFNILLQVLEDGRLTDSKGRTVDFRNTAVIMTS 660 Query: 659 NVGAQAIKKNSTLGFTAVQDAGADYNNMKGKVMEELKKSFRPEFLNRIDEIIVFHSLEEK 718 NVGA ++KN LGFT G++Y +MK KVM ELK SFRPEFLNRIDEIIVFHSLE+K Sbjct: 661 NVGASTLRKNKFLGFT-TDSEGSEYKDMKDKVMTELKNSFRPEFLNRIDEIIVFHSLEKK 719 Query: 719 HIAEIVTLMSDELRKRLREYDVDFMLTDGAKAFLAKEGYDPAFGARPLRRAIQKHIEDRL 778 H+ EI+TLM+D+L+KRL E V F LT+ AK + GYDP +GARPLRRA+Q+ +EDRL Sbjct: 720 HVREIITLMADQLKKRLEEQGVSFELTEAAKDKITDLGYDPEYGARPLRRALQREVEDRL 779 Query: 779 SEELLKGNIKKGDSLKIDEVNGELVVTTVE 808 SEELLKG I+KG ID NGELVV + E Sbjct: 780 SEELLKGTIQKGQRAIIDVENGELVVHSKE 809 >BS_clpC [O] COG0542 ATPases with chaperone activity, ATP-binding subunit Length = 810 Score = 1260 bits (3261), Expect = 0.0, Method: Compositional matrix adjust. Identities = 626/806 (77%), Positives = 709/806 (87%), Gaps = 1/806 (0%) Query: 1 MMFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLIREGDXXXXXXXXXXXXXXXXX 60 MMFGRFTERAQKVLALAQEEA+RLGHNNIGTEHILLGL+REG+ Sbjct: 1 MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSEKI 60 Query: 61 QDEVETLIGRGQEQPTNIAYTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVA 120 Q EVE+LIGRGQE I YTPRAKKVIELSMDEARKLGH+YVGTEHILLGLIREGEGVA Sbjct: 61 QKEVESLIGRGQEMSQTIHYTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVA 120 Query: 121 ARVLNNLGISLNKARQQVLQLLGSSEATSSHSGTPANVSTPTLDGLARDLTAYAKDGNLD 180 ARVLNNLG+SLNKARQQVLQLLGS+E SS +GT +N +TPTLD LARDLTA AK+ +LD Sbjct: 121 ARVLNNLGVSLNKARQQVLQLLGSNETGSSAAGTNSNANTPTLDSLARDLTAIAKEDSLD 180 Query: 181 PVIGRSKEIERVIQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQKIINNEIPETLRDKRVM 240 PVIGRSKEI+RVI+VLSRRTKNNPVLIGEPGVGKTAIAEGLAQ+IINNE+PE LRDKRVM Sbjct: 181 PVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM 240 Query: 241 TLDMGSVVAGTKYRGEFEDRLKKIMDEIRQAGNIVLFIDELHTLXXXXXXXXXXXXSNIL 300 TLDMG+VVAGTKYRGEFEDRLKK+MDEIRQAGNI+LFIDELHTL SNIL Sbjct: 241 TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNIL 300 Query: 301 KPALARGELQCIGATTLDEYRKYIEKDAALERRFQPITVDQPSPEEAVQILYGLRDRYEA 360 KP+LARGELQCIGATTLDEYRKYIEKDAALERRFQPI VDQPS +E++QIL GLRDRYEA Sbjct: 301 KPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQILQGLRDRYEA 360 Query: 361 HHRVKITDEAIVEAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLNSYTIPPNLKELEMRL 420 HHRV ITD+AI AVKLSDRYISDRFLPDKAIDLIDEAGSKVRL S+T PPNLKELE +L Sbjct: 361 HHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKL 420 Query: 421 DDIRKEKDSAVQSQEFEKAAALRDTEQKIREELDTTKNQWKEKQGRTDSQVTPEDIAQVV 480 D++RKEKD+AVQSQEFEKAA+LRDTEQ++RE+++ TK WKEKQG+ +S+VT +DIA VV Sbjct: 421 DEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVV 480 Query: 481 ASWTGIPVSKLKEEETDRLLNMEALLHERVIGQDEAVKAVSRALRRARAGLKDPKRPMGS 540 +SWTG+PVSK+ + ETD+LLNME +LH RVIGQDEAV AV++A+RRARAGLKDPKRP+GS Sbjct: 481 SSWTGVPVSKIAQTETDKLLNMENILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGS 540 Query: 541 FIFLGPTGVGKTELARALAEAMFGDENAVVRIDMSEYMEKHSTSRLVGAPPGYVGYEEGG 600 FIFLGPTGVGKTELARALAE++FGDE +++RIDMSEYMEKHSTSRLVG+PPGYVGY+EGG Sbjct: 541 FIFLGPTGVGKTELARALAESIFGDEESMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGG 600 Query: 601 QLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNV 660 QLTEKVRRKPYSVVLLDEIEKAHP+VFNILLQVLEDGRLTDSKGR VDFRNT++I+TSNV Sbjct: 601 QLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNV 660 Query: 661 GAQAIKKNSTLGFTAVQDAGADYNNMKGKVMEELKKSFRPEFLNRIDEIIVFHSLEEKHI 720 GA +K+N +GF VQD ++ +MK KVM ELK++FRPEF+NRIDEIIVFHSLE+KH+ Sbjct: 661 GASELKRNKYVGFN-VQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL 719 Query: 721 AEIVTLMSDELRKRLREYDVDFMLTDGAKAFLAKEGYDPAFGARPLRRAIQKHIEDRLSE 780 EIV+LMSD+L KRL+E D+ LTD AKA +A+EG D +GARPLRRAIQKH+EDRLSE Sbjct: 720 TEIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSE 779 Query: 781 ELLKGNIKKGDSLKIDEVNGELVVTT 806 ELL+GNI KG + +D +GE VV T Sbjct: 780 ELLRGNIHKGQHIVLDVEDGEFVVKT 805 >lin0264 [O] COG0542 ATPases with chaperone activity, ATP-binding subunit Length = 820 Score = 1204 bits (3116), Expect = 0.0, Method: Compositional matrix adjust. Identities = 591/804 (73%), Positives = 692/804 (86%), Gaps = 2/804 (0%) Query: 1 MMFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLIREGDXXXXXXXXXXXXXXXXX 60 MMFGRFT+RAQKVLAL+QEEA+RL H+N+GTEHILLGL+REG+ Sbjct: 1 MMFGRFTQRAQKVLALSQEEAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISSEKV 60 Query: 61 QDEVETLIGRGQEQPTNIAYTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVA 120 Q EVE LIG G++ T I YTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVA Sbjct: 61 QQEVEGLIGHGEKAVTTIQYTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVA 120 Query: 121 ARVLNNLGISLNKARQQVLQLLGSSEATSSHSGTPANVSTPTLDGLARDLTAYAKDGNLD 180 ARVL+NLGISLNKARQQVLQLLG +AT + T +TPTLD LARDLT A++ NLD Sbjct: 121 ARVLSNLGISLNKARQQVLQLLGGGDATGAGRQTNTQ-ATPTLDSLARDLTVIAREENLD 179 Query: 181 PVIGRSKEIERVIQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQKIINNEIPETLRDKRVM 240 PVIGRSKEI+RVI+VLSRRTKNNPVLIGEPGVGKTAIAEGLAQ+I+ NE+PETLR KRVM Sbjct: 180 PVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVM 239 Query: 241 TLDMGSVVAGTKYRGEFEDRLKKIMDEIRQAGNIVLFIDELHTLXXXXXXXXXXXXSNIL 300 TLDMG+VVAGTKYRGEFEDRLKK+MDEIRQAGN++LFIDELHTL SNIL Sbjct: 240 TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNIL 299 Query: 301 KPALARGELQCIGATTLDEYRKYIEKDAALERRFQPITVDQPSPEEAVQILYGLRDRYEA 360 KP LARGELQCIGATTLDEYRKYIEKDAALERRFQPI VD+P+ EE++QIL+GLRDRYEA Sbjct: 300 KPPLARGELQCIGATTLDEYRKYIEKDAALERRFQPIKVDEPTVEESIQILHGLRDRYEA 359 Query: 361 HHRVKITDEAIVEAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLNSYTIPPNLKELEMRL 420 HHRV ITDEA+ AV+LSDRYISDRFLPDKAID+IDE+GSKVRL S+T P N+KE+E L Sbjct: 360 HHRVAITDEALEAAVRLSDRYISDRFLPDKAIDVIDESGSKVRLKSFTTPKNVKEMENNL 419 Query: 421 DDIRKEKDSAVQSQEFEKAAALRDTEQKIREELDTTKNQWKEKQGRTDSQVTPEDIAQVV 480 +++KEKD+AVQ QEFEKAAALRD EQK+++ L+ TK W+EKQG S+VT + +A+VV Sbjct: 420 SELKKEKDAAVQGQEFEKAAALRDKEQKLKKSLEETKANWQEKQGLDHSEVTEDIVAEVV 479 Query: 481 ASWTGIPVSKLKEEETDRLLNMEALLHERVIGQDEAVKAVSRALRRARAGLKDPKRPMGS 540 ASWTGIPV+KL E ET++LLNME LLHERVIGQD AVKAVS A+RRARAGLKDPKRP+GS Sbjct: 480 ASWTGIPVAKLAETETNKLLNMEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGS 539 Query: 541 FIFLGPTGVGKTELARALAEAMFGDENAVVRIDMSEYMEKHSTSRLVGAPPGYVGYEEGG 600 FIFLGPTGVGKTELARALAE+MFGDE++++RIDMSEYMEK ST+RLVGAPPGYVGYEEGG Sbjct: 540 FIFLGPTGVGKTELARALAESMFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGG 599 Query: 601 QLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNV 660 QLTEKVR+KPYSVVLLDEIEKAHP+VFN+LLQVL+DGRLTDSKGRVVDFRNT+II+TSN+ Sbjct: 600 QLTEKVRQKPYSVVLLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNI 659 Query: 661 GAQAIKKNSTLGFTAVQDAGADYNNMKGKVMEELKKSFRPEFLNRIDEIIVFHSLEEKHI 720 GAQ +K++ ++GF + D D+ M+ +V+++LK++FRPEF+NRIDE IVFHSL+EK + Sbjct: 660 GAQEMKQDKSMGFNVI-DPLKDHKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKEL 718 Query: 721 AEIVTLMSDELRKRLREYDVDFMLTDGAKAFLAKEGYDPAFGARPLRRAIQKHIEDRLSE 780 +IVTL++ +L KRL E D+ LT+GAKA +AK+GYDP +GARPL+RAIQK +ED LSE Sbjct: 719 KQIVTLLTSQLTKRLAERDIHVKLTEGAKAKIAKDGYDPEYGARPLKRAIQKEVEDMLSE 778 Query: 781 ELLKGNIKKGDSLKIDEVNGELVV 804 ELL+GNIK GD+++I +G+L V Sbjct: 779 ELLRGNIKVGDNVEIGVKDGKLEV 802 >SA0483 [O] COG0542 ATPases with chaperone activity, ATP-binding subunit Length = 818 Score = 1085 bits (2806), Expect = 0.0, Method: Compositional matrix adjust. Identities = 524/796 (65%), Positives = 644/796 (80%), Gaps = 1/796 (0%) Query: 1 MMFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLIREGDXXXXXXXXXXXXXXXXX 60 M+FGR TERAQ+VLA AQEEA+RL H+NIGTEH+LLGL++E + Sbjct: 1 MLFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKV 60 Query: 61 QDEVETLIGRGQEQPTNIAYTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVA 120 +EVE LIG GQ+ + YTPRAKKVIELSMDEARKL H +VGTEHILLGLIRE EGVA Sbjct: 61 IEEVEKLIGHGQDHVGTLHYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVA 120 Query: 121 ARVLNNLGISLNKARQQVLQLLGSSEATSSHSGTPANVSTPTLDGLARDLTAYAKDGNLD 180 ARV NL +++ KAR QV++ LG+ E ++ ++ + +TPTLD LARDLT AKDG LD Sbjct: 121 ARVFANLDLNITKARAQVVKALGNPEMSNKNAQASKSNNTPTLDSLARDLTVIAKDGTLD 180 Query: 181 PVIGRSKEIERVIQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQKIINNEIPETLRDKRVM 240 PVIGR KEI RVI+VLSRRTKNNPVLIGEPGVGKTAIAEGLAQ I+NNE+PETL+DKRVM Sbjct: 181 PVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVM 240 Query: 241 TLDMGSVVAGTKYRGEFEDRLKKIMDEIRQAGNIVLFIDELHTLXXXXXXXXXXXXSNIL 300 +LDMG+VVAGTKYRGEFE+RLKK+M+EI+QAGN++LFIDELHTL SNIL Sbjct: 241 SLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDASNIL 300 Query: 301 KPALARGELQCIGATTLDEYRKYIEKDAALERRFQPITVDQPSPEEAVQILYGLRDRYEA 360 KPALARGELQCIGATTLDEYRK IEKDAALERRFQP+ VD+PS + V IL GLRDRYEA Sbjct: 301 KPALARGELQCIGATTLDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEA 360 Query: 361 HHRVKITDEAIVEAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLNSYTIPPNLKELEMRL 420 HHR+ I+DEAI AVKLS+RY+SDRFLPDKAIDLIDEA SKVRL S+T P NLKE+E + Sbjct: 361 HHRINISDEAIEAAVKLSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEI 420 Query: 421 DDIRKEKDSAVQSQEFEKAAALRDTEQKIREELDTTKNQWKEKQGRTDSQVTPEDIAQVV 480 + ++ EKD+AV +QEFE AA LRD + K+ ++ + KN+WK Q + ++ EDIA+V+ Sbjct: 421 EKVKNEKDAAVHAQEFENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTSLSEEDIAEVI 480 Query: 481 ASWTGIPVSKLKEEETDRLLNMEALLHERVIGQDEAVKAVSRALRRARAGLKDPKRPMGS 540 A WTGIP++K+ E E+++LL++E LHERVIGQ +AV ++S+A+RRARAGLKDPKRP+GS Sbjct: 481 AGWTGIPLTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGS 540 Query: 541 FIFLGPTGVGKTELARALAEAMFGDENAVVRIDMSEYMEKHSTSRLVGAPPGYVGYEEGG 600 FIFLGPTGVGKTELARALAE+MFGD++A++R+DMSE+MEKH+ SRLVGAPPGYVG+++GG Sbjct: 541 FIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGG 600 Query: 601 QLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILTSNV 660 QLTEKVRRKPYSV+L DEIEKAHP+VFNILLQVL+DG LTD+KGR VDFRNT+II+TSNV Sbjct: 601 QLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNV 660 Query: 661 GAQAIKKNSTLGFTAVQDAGADYNNMKGKVMEELKKSFRPEFLNRIDEIIVFHSLEEKHI 720 GAQ ++ GF D G DY ++ +++ELK SFRPEFLNR+D+IIVFH L ++ + Sbjct: 661 GAQELQDQRFAGFGGSSD-GQDYETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEEL 719 Query: 721 AEIVTLMSDELRKRLREYDVDFMLTDGAKAFLAKEGYDPAFGARPLRRAIQKHIEDRLSE 780 EIVT+M ++L RL E +++ ++TD AK +A+EGYDP +GARPL RAIQK IED LSE Sbjct: 720 KEIVTMMVNKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSE 779 Query: 781 ELLKGNIKKGDSLKID 796 +L GN +G + +D Sbjct: 780 LILDGNQIEGKKVTVD 795 >alr2999 [O] COG0542 ATPases with chaperone activity, ATP-binding subunit Length = 359 Score = 988 bits (2553), Expect = 0.0, Method: Compositional matrix adjust. Identities = 0/812 (0%), Positives = 0/812 (0%), Gaps = 9/812 (1%) Query: 2 MFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLIREGDXXXXXXXXXXXXXXXXXQ 61 + + + + Sbjct: 17 LQRLRELAPASKMVAVVKANAYGHGLLETARTLPDADAFGVARLEEALRLRAGGITKPVL 76 Query: 62 DEVETLIGRGQE-QPTNIAYTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVA 120 R +T + +++EA V + Sbjct: 77 LLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWMKLDTGMHRLGVRPEQ 136 Query: 121 ARVLNNLGISLNKARQQVLQLLGSSEATSSHSGTPANVSTPTLDGLARDLTAYAKDGNLD 180 A + RQ V + + + Sbjct: 137 AEAFYHRLTQCKNVRQPVNIVSHFA-RADEPKCGATEKQLAIFNTFCEGKPGQRSIAASG 195 Query: 181 PVIGRSKEIERVIQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQKIINNEIPETLRDKRVM 240 ++ + ++ +P+ G + + Sbjct: 196 GILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSSLIAVREHKAGEPVGY 255 Query: 241 TLDMGSVVAGTKYRGEFEDRLKKIMDEIRQAGNIVLFIDELHTLXXXXXXXXXXXXSNIL 300 S +V + Sbjct: 256 GGTWVSERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPIVGRVAMDMICVDLGPQAQ 315 Query: 301 KPALARGELQCIGATTLDEYRKYIEKDAALERRFQPITVDQPSPEEAVQILYGLRDRYEA 360 Sbjct: 316 375 Query: 361 HHRVKITDEAIVEAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLNSYTIPPNLKELEMRL 420 Sbjct: 376 435 Query: 421 DDIRKEKDSAVQSQEFEKAAALRDTEQKIREELDTTKNQWKEKQGRTDSQ---VTPEDIA 477 Sbjct: 436 - 494 Query: 478 QVVASWTGIPVSKLKEEETDRLLNMEALLHERVIGQDEAVKAVSRALRRARAGLKDPKRP 537 Sbjct: 495 554 Query: 538 MGSFIFLGPTGVGKTELARALAEAMFGDENAVVRIDMSEYMEKHSTSRLVGAPPGYVGYE 597 Sbjct: 555 614 Query: 598 EGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDSKGRVVDFRNTLIILT 657 Sbjct: 615 674 Query: 658 SNVGAQAIKK-NSTLGFTAVQDAG-ADYNNMKGKVMEELKKSFRPEFLNRIDEIIVFHSL 715 Sbjct: 675 734 Query: 716 EEKHIAEIVTLMSDELRKRLREYDVDFMLTDGAKAFLAKEGYDPAFGARPLRRAIQKHIE 775 Sbjct: 735 794 Query: 776 DRLSEELLKGNIKKGDSLKID-EVNGELVVTT 806 Sbjct: 795 826 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.315 0.134 0.367 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 57,971,118 Number of extensions: 2483207 Number of successful extensions: 8904 Number of sequences better than 1.0e-05: 128 Number of HSP's gapped: 8449 Number of HSP's successfully gapped: 207 Length of query: 822 Length of database: 38,378,431 Length adjustment: 115 Effective length of query: 707 Effective length of database: 25,115,021 Effective search space: 17756319847 Effective search space used: 17756319847 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 120 (50.8 bits)