BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0184.0015.p (212 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BS_yvdM [R] COG0637 Predicted phosphatase/phosphohexomutase 218 6e-57 ZycjU [R] COG0637 Predicted phosphatase/phosphohexomutase 208 4e-54 ECs1896 [R] COG0637 Predicted phosphatase/phosphohexomutase 208 4e-54 ycjU [R] COG0637 Predicted phosphatase/phosphohexomutase 203 2e-52 ZycjU [R] COG0637 Predicted phosphatase/phosphohexomutase 203 2e-52 >BS_yvdM [R] COG0637 Predicted phosphatase/phosphohexomutase Length = 346 Score = 218 bits (555), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 8/190 (4%), Positives = 31/190 (16%) Query: 3 LEAVIFDLDGVITDTAEYHYIAWKQLGESIGIPFDREFNETLKGISRGESLERILRLGGK 62 ++ + T + + + ++ + + + Sbjct: 1 MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPE 60 Query: 63 ETEFTPVEKAELARRKNEHYVSLLDGLTPGDTYPGIAGLLEELQAQNIPAVIASASKNAP 122 T + ++ G + G+ + A Sbjct: 61 TQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKR 120 Query: 123 QILRSLQLDGLFRYVVDPDSVQHGKPAPDLFLRGAAEVGARPEYCVGIEDATAGIQAIKA 182 L L + + + + + + Sbjct: 121 LQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSN 180 Query: 183 AGMKAVGIGE 192 V Sbjct: 181 ETAFGVMRYL 190 >ZycjU [R] COG0637 Predicted phosphatase/phosphohexomutase Length = 346 Score = 208 bits (530), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 17/191 (8%), Positives = 34/191 (17%) Query: 1 MKLEAVIFDLDGVITDTAEYHYIAWKQLGESIGIPFDREFNETLKGISRGESLERILRLG 60 M+ + V T + D + + I E R Sbjct: 1 MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPE 60 Query: 61 GKETEFTPVEKAELARRKNEHYVSLLDGLTPGDTYPGIAGLLEELQAQNIPAVIASASKN 120 + T V E + P + L +NI + + K Sbjct: 61 TQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKR 120 Query: 121 APQILRSLQLDGLFRYVVDPDSVQHGKPAPDLFLRGAAEVGARPEYCVGIEDATAGIQAI 180 L + + + + Sbjct: 121 LQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSN 180 Query: 181 KAAGMKAVGIG 191 + A + Sbjct: 181 ETAFGVMRYLH 191 >ECs1896 [R] COG0637 Predicted phosphatase/phosphohexomutase Length = 346 Score = 208 bits (530), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 17/191 (8%), Positives = 34/191 (17%) Query: 1 MKLEAVIFDLDGVITDTAEYHYIAWKQLGESIGIPFDREFNETLKGISRGESLERILRLG 60 M+ + V T + D + + I E R Sbjct: 1 MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPE 60 Query: 61 GKETEFTPVEKAELARRKNEHYVSLLDGLTPGDTYPGIAGLLEELQAQNIPAVIASASKN 120 + T V E + P + L +NI + + K Sbjct: 61 TQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKR 120 Query: 121 APQILRSLQLDGLFRYVVDPDSVQHGKPAPDLFLRGAAEVGARPEYCVGIEDATAGIQAI 180 L + + + + Sbjct: 121 LQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSN 180 Query: 181 KAAGMKAVGIG 191 + A + Sbjct: 181 ETAFGVMRYLH 191 >ycjU [R] COG0637 Predicted phosphatase/phosphohexomutase Length = 346 Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 17/191 (8%), Positives = 34/191 (17%) Query: 1 MKLEAVIFDLDGVITDTAEYHYIAWKQLGESIGIPFDREFNETLKGISRGESLERILRLG 60 M+ + V T + D + + I E R Sbjct: 1 MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPE 60 Query: 61 GKETEFTPVEKAELARRKNEHYVSLLDGLTPGDTYPGIAGLLEELQAQNIPAVIASASKN 120 + T V E + P + L +NI + + K Sbjct: 61 TQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKR 120 Query: 121 APQILRSLQLDGLFRYVVDPDSVQHGKPAPDLFLRGAAEVGARPEYCVGIEDATAGIQAI 180 L + + + + Sbjct: 121 LQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSN 180 Query: 181 KAAGMKAVGIG 191 + A + Sbjct: 181 ETAFGVMRYLH 191 Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 17/191 (8%), Positives = 34/191 (17%) Query: 1 MKLEAVIFDLDGVITDTAEYHYIAWKQLGESIGIPFDREFNETLKGISRGESLERILRLG 60 M+ + V T + D + + I E R Sbjct: 1 MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPE 60 Query: 61 GKETEFTPVEKAELARRKNEHYVSLLDGLTPGDTYPGIAGLLEELQAQNIPAVIASASKN 120 + T V E + P + L +NI + + K Sbjct: 61 TQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKR 120 Query: 121 APQILRSLQLDGLFRYVVDPDSVQHGKPAPDLFLRGAAEVGARPEYCVGIEDATAGIQAI 180 L + + + + Sbjct: 121 LQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSN 180 Query: 181 KAAGMKAVGIG 191 + A + Sbjct: 181 ETAFGVMRYLH 191 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.317 0.137 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 15,430,420 Number of extensions: 620919 Number of successful extensions: 1636 Number of sequences better than 1.0e-05: 79 Number of HSP's gapped: 1584 Number of HSP's successfully gapped: 79 Length of query: 212 Length of database: 38,378,431 Length adjustment: 102 Effective length of query: 110 Effective length of database: 26,614,363 Effective search space: 2927579930 Effective search space used: 2927579930 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 113 (48.1 bits)