BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0176.0014.p
         (186 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VNG0559G [F] COG0503 Adenine/guanine phosphoribosyltransferases ...    71   7e-13
FN2073 [F] COG0503 Adenine/guanine phosphoribosyltransferases an...    54   1e-07

>VNG0559G [F] COG0503 Adenine/guanine phosphoribosyltransferases and related
           PRPP-binding proteins
          Length = 188

 Score = 71.2 bits (173), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 88/173 (50%), Gaps = 10/173 (5%)

Query: 7   RLSESISKAKNVRIYKDKDTAYDFKLYPFGERGTYIDPELISEITDSLAESITAQFPAFD 66
           RL +S+  A    I KD    Y + ++P  +    ++PEL+ EI   +     A+    D
Sbjct: 3   RLKQSLLDAP--IIEKD---GYHYFVHPISDGVPMLEPELLREIVIRIIRK--AELDEVD 55

Query: 67  YIVSPEPGGHTWGMLAAYKLMKPMNILRLSTELYD-NYEVSIKRETAYNENYIYFDGFTA 125
            IV+P   G    +  A  LM  + I+ +    Y    EV++ +ET Y+EN +Y +    
Sbjct: 56  KIVTPAAMG--IHISTAVSLMTDIPIVVIRKREYGLPGEVALSQETGYSENEMYINDVHE 113

Query: 126 GDRVLLLDDVISSGATIRCIARQMARMGIELTGVQAILAKGDHYKQLQTDIGV 178
           GDRVL+LDDV+S+G T+R I   + + G ++  V A++ K    +   TD+ V
Sbjct: 114 GDRVLVLDDVLSTGGTLRAITDALEQTGADVADVLAVIKKAGPNELDDTDMDV 166


>FN2073 [F] COG0503 Adenine/guanine phosphoribosyltransferases and related
           PRPP-binding proteins
          Length = 177

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 15/131 (11%)

Query: 48  SEITDSLAESITAQFPAFDYIVSPEPGGHTWGMLAAYKLMKPMN-----ILRLSTELY-- 100
           +EI    A  I  + P  D++V+ E      G+  AY++ K +N     + R S + Y  
Sbjct: 35  TEIVKKTAPMIAKKLPEVDFVVTAE----AKGIPLAYEISKVLNLDEYIVARKSVKAYME 90

Query: 101 DNYEVSIKRETAYNENYIYFDGF----TAGDRVLLLDDVISSGATIRCIARQMARMGIEL 156
           +  EV +   T  +   +Y +        G RV L+DDVIS+G +++ + R + + G ++
Sbjct: 91  EPIEVELHSITTTDSQKLYLNSLDVEKIKGKRVALVDDVISTGQSLKALERLVEKAGGKV 150

Query: 157 TGVQAILAKGD 167
               AILA+GD
Sbjct: 151 VAKAAILAEGD 161


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.319    0.136    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 13,042,206
Number of extensions: 491279
Number of successful extensions: 1204
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1212
Number of HSP's successfully gapped: 4
Length of query: 186
Length of database: 38,378,431
Length adjustment: 100
Effective length of query: 86
Effective length of database: 26,845,031
Effective search space: 2308672666
Effective search space used: 2308672666
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)