BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0172.0009.p (233 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BH2860 [P] COG0861 Membrane protein TerC, possibly involved in t... 126 3e-29 BS_yjbE [P] COG0861 Membrane protein TerC, possibly involved in ... 109 5e-24 PA1170 [P] COG0861 Membrane protein TerC, possibly involved in t... 101 1e-21 RSc0949 [P] COG0861 Membrane protein TerC, possibly involved in ... 96 5e-20 CAC1039 [P] COG0861 Membrane protein TerC, possibly involved in ... 84 2e-16 >BH2860 [P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance Length = 223 Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 76/221 (34%), Positives = 110/221 (49%), Gaps = 3/221 (1%) Query: 6 LDFILPLLNIIFLDLILAGDNAIVIGLAARNLQGRTQKKAILLGTGGAVVLRIIATXXXX 65 LDFIL ++ II +DLIL GDNAIV+ LA R+L + + KAI++G G A+++R++ T Sbjct: 4 LDFILSVITIIGIDLILGGDNAIVVALACRHLPKQQRNKAIMIGIGLALLVRVLLTMVAV 63 Query: 66 XXXXXXXXXXXXXXXXXXXXXXXXTGDSGGPNIQAGGTLWAAVRTIIIADAAMGLDXXXX 125 ++ I G TL +A++ I+IAD MG D Sbjct: 64 QLLEIPFLLGIGGALLIYIAFQLLVDNNSEQEISTGPTLGSAIKAIVIADCVMGFDNVLA 123 Query: 126 XXXXXXXXXXLVVLGLLISVPIVVWGSTLFIKLMGRYPWIIYIGSAVLGLTASGMITEEK 185 LV+ GLLISVPI++WGS L + L +P I+YIG+ +L TAS MIT E Sbjct: 124 IAGASHGNPILVITGLLISVPIIIWGSKLILVLFDTFPIIVYIGAGILAFTASRMITHEP 183 Query: 186 RIAPFVEEHPXXXXXXXXXXXXXXXAAGHWKRVRDHQKAAH 226 +AP P A G+ + ++K +H Sbjct: 184 MLAPLFINQPGFMIFFQVTVIAFVLALGYTCK---NKKKSH 221 >BS_yjbE [P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance Length = 80 Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 0/188 (0%), Positives = 0/188 (0%) Query: 7 DFILPLLNIIFLDLILAGDNAIVIGLAARNLQGRTQKKAILLGTGGAVVLRIIATXXXXX 66 V A + + +A Sbjct: 4 VLYGIFAISALAATSAWAAPVQVGEAAGSAATSVSAGSSSATSVSTVSSAVGVALAATGG 63 Query: 67 XXXXXXXXXXXXXXXXXXXXXXXTGDSGGPNIQAGGTLWAAVRTIIIADAAMGLDXXXXX 126 Sbjct: 64 123 Query: 127 XXXXXXXXXLVVLGLLISVPIVVWGSTLFIKLMGRYPWIIYIGSAVLGLTASGMITEEKR 186 Sbjct: 124 183 Query: 187 IAPFVEEH 194 Sbjct: 184 191 >PA1170 [P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance Length = 244 Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 64/188 (34%), Positives = 95/188 (50%), Gaps = 1/188 (0%) Query: 8 FILPLLNIIFLDLILAGDNAIVIGLAARNLQGRTQKKAILLGTGGAVVLRIIATXXXXXX 67 F LL I+ +D++L GDNA+VI LA R+L +K+AI G GA+++RI+ Sbjct: 10 FWTALLQIVAIDILLGGDNAVVIALACRHLPAHRRKQAIFGGVAGAILIRILLLFFALHL 69 Query: 68 XXXXXXXXXXXXXXX-XXXXXXXTGDSGGPNIQAGGTLWAAVRTIIIADAAMGLDXXXXX 126 + G +I+ L A++TIIIADA M LD Sbjct: 70 LDLPYLKVIGALLLLWIGIKLLLPEEENGDDIKGSTHLLGAIKTIIIADAVMSLDNVIAL 129 Query: 127 XXXXXXXXXLVVLGLLISVPIVVWGSTLFIKLMGRYPWIIYIGSAVLGLTASGMITEEKR 186 LV LG+LIS+PI+VWGS L ++L+ R+P II G +LG A GM+ + Sbjct: 130 SAASAGDFFLVSLGVLISIPIIVWGSQLILRLIDRFPLIILFGGGLLGWIAGGMLLTDSA 189 Query: 187 IAPFVEEH 194 + P++ + Sbjct: 190 LKPWLAPY 197 >RSc0949 [P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance Length = 230 Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 80/192 (41%), Positives = 103/192 (53%), Gaps = 2/192 (1%) Query: 6 LDFILPLLNIIFLDLILAGDNAIVIGLAARNLQGRTQKKAILLGTGGAVVLRIIATXXXX 65 + F L +II +DL+LAGDNAI+I LAARNL QKKAIL G GA+++R + T Sbjct: 10 MQFAAALASIIVIDLVLAGDNAILIALAARNLPPDLQKKAILWGAAGAIIVRALMTLAVV 69 Query: 66 XXXXXXXXXXXXXXXXXXXXXXXXTGD--SGGPNIQAGGTLWAAVRTIIIADAAMGLDXX 123 D G + A TL A++TIIIADA MG+D Sbjct: 70 WLLKIPGLMLVGGLALVWIAWKLLADDDQDDGAHGTASHTLLGAMKTIIIADAVMGIDNV 129 Query: 124 XXXXXXXXXXXXLVVLGLLISVPIVVWGSTLFIKLMGRYPWIIYIGSAVLGLTASGMITE 183 LVVLGLL+SVP+VVWGS + ++L+ R+P IIY G+AVL TA+ MI Sbjct: 130 LAIAGASHGSFLLVVLGLLVSVPVVVWGSGVVLRLIERFPIIIYGGAAVLAYTAAHMIVA 189 Query: 184 EKRIAPFVEEHP 195 E + P E P Sbjct: 190 EPVVKPVFAEQP 201 >CAC1039 [P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance Length = 239 Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 61/194 (31%), Positives = 89/194 (45%), Gaps = 8/194 (4%) Query: 6 LDFILPL----LNIIFLDLILAGDNAIVIGLAARNLQGRTQKKAILLGTGGAVVLRII-- 59 +D ++P+ L I LD++L+GDN VI LA ++L KKA +G AV LRII Sbjct: 1 MDNLIPIFLGALQITLLDVVLSGDNIGVIALATKDLPKTLAKKASFIGVVAAVTLRIIFA 60 Query: 60 --ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGDSGGPNIQAGGTLWAAVRTIIIADAA 117 T +S + + AA+++II+AD Sbjct: 61 CLITYILMIQWLPIKLVGGIILVKITWDFIKPHEESSNKAVHNSKKMLAAIQSIILADFT 120 Query: 118 MGLDXXXXXXXXXXXXXXLVVLGLLISVPIVVWGSTLFIKLMGRYPWIIYIGSAVLGLTA 177 M LD L+V GL++++PI+ WGS LM +Y +IYIG A+L TA Sbjct: 121 MSLDNVLAIAAAAKGHIGLIVFGLILNIPIIFWGSQYVATLMKKYKIVIYIGGAILAHTA 180 Query: 178 SGMITEEKRIAPFV 191 MI E++ I V Sbjct: 181 FSMIFEDRLIKNIV 194 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.324 0.142 0.425 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 13,326,722 Number of extensions: 434080 Number of successful extensions: 812 Number of sequences better than 1.0e-05: 10 Number of HSP's gapped: 806 Number of HSP's successfully gapped: 11 Length of query: 233 Length of database: 38,378,431 Length adjustment: 103 Effective length of query: 130 Effective length of database: 26,499,029 Effective search space: 3444873770 Effective search space used: 3444873770 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 114 (48.5 bits)