BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0162.0007.p
         (139 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VCA0470 [R] COG0456 Acetyltransferases                                124   5e-29
PA4534 [R] COG0456 Acetyltransferases                                 101   3e-22
YPO3031 [R] COG0456 Acetyltransferases                                 73   1e-13
ypeA [R] COG0456 Acetyltransferases                                    65   3e-11
Z3699 [R] COG0456 Acetyltransferases                                   63   1e-10

>VCA0470 [R] COG0456 Acetyltransferases
          Length = 144

 Score =  124 bits (311), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 60/138 (43%), Positives = 85/138 (61%), Gaps = 1/138 (0%)

Query: 1   MNYRPMTADDYEAAYRLWENTEGMNLSGADSREEILRYLERNPGMSQVAVNGDKTLAGTA 60
           + +R M   DY     LW  TE ++L  ADSR  I  YL+RN G+S VAV+ D  + G  
Sbjct: 2   VTFREMDISDYNEVIALWATTENVSLRDADSRPNIEAYLKRNQGLSFVAVS-DSLVIGAV 60

Query: 61  MCGHDGRRGYMYHVAVSEDGRGQGVGRELVSRCLASLLQEGIEKCHLMVIESNALGRSFW 120
           + G DGRRGY+ H+AVS D RGQG+G+ L+ +   +L + GI K HL V+  N + + F+
Sbjct: 61  LVGTDGRRGYVQHLAVSSDFRGQGIGKSLIQKATDALSRIGISKTHLFVLIENVVAQDFY 120

Query: 121 TRIGWEERDGIVLFSSNT 138
           T++ W  RD I +FS N+
Sbjct: 121 TKLDWYPRDEIRMFSYNS 138


>PA4534 [R] COG0456 Acetyltransferases
          Length = 141

 Score =  101 bits (251), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 77/138 (55%), Gaps = 2/138 (1%)

Query: 1   MNYRPMTADDYEAAYRLWENTEGMNLSGADSREEILRYLERNPGMSQVAVNGDKTLAGTA 60
           M  R + A D+ A + LW  T G+ L   D+    L YL+RNPG+S + V  +  +    
Sbjct: 1   MQLRSVIAADHPALFALWSRTPGIRLRAEDAYPFFLAYLQRNPGLS-LLVETEGEVIACL 59

Query: 61  MCGHDGRRGYMYHVAVSEDGRGQGVGRELVSRCLASLLQEGIEKCHLMVIESNALGRSFW 120
           M GHDGRRGY+ H+ V    RG G+ R ++   LA L +EGI K H+ V+++    ++FW
Sbjct: 60  MAGHDGRRGYLQHLVVDPGYRGLGLARRMLDEVLARLAREGIGKSHVFVLDAAEEAQAFW 119

Query: 121 -TRIGWEERDGIVLFSSN 137
             +  WE R  I +FS+ 
Sbjct: 120 RAQSDWERRKDIQVFSTR 137


>YPO3031 [R] COG0456 Acetyltransferases
          Length = 141

 Score = 72.8 bits (177), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 4/134 (2%)

Query: 1   MNYRPMTADDYEAAYRLWENTEGMNLSGADSREEILRYLERNPGMSQVA-VNGDKTLAGT 59
           M  R    DD+E    LWE+ + +     D   +I R L  +P +  VA VNG  T+ G+
Sbjct: 1   MEIRIFQQDDFEEVILLWEHCDLLR-PWNDPEMDIERKLNHDPELFLVAEVNG--TIVGS 57

Query: 60  AMCGHDGRRGYMYHVAVSEDGRGQGVGRELVSRCLASLLQEGIEKCHLMVIESNALGRSF 119
            M G+DG RG  Y++ V  D RG+G    L+SR    L+  G  K ++MV E N      
Sbjct: 58  VMGGYDGHRGSAYYLGVHPDYRGRGFANALISRLEKKLIARGCPKLNIMVREDNDAVIGM 117

Query: 120 WTRIGWEERDGIVL 133
           + ++ +E +D I+L
Sbjct: 118 YEKLDYETQDTIML 131


>ypeA [R] COG0456 Acetyltransferases
          Length = 178

 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 4/134 (2%)

Query: 1   MNYRPMTADDYEAAYRLWENTEGMNLSGADSREEILRYLERNPGMSQVA-VNGDKTLAGT 59
           M  R    +D+E    LWE  + +     D   +I R +  +  +  VA VNGD  + GT
Sbjct: 38  MEIRVFRQEDFEEVITLWERCDLLR-PWNDPEMDIERKMNHDVSLFLVAEVNGD--VVGT 94

Query: 60  AMCGHDGRRGYMYHVAVSEDGRGQGVGRELVSRCLASLLQEGIEKCHLMVIESNALGRSF 119
            M G+DG RG  Y++ V  + RG+G+   L++R    L+  G  K  + V E N +    
Sbjct: 95  VMGGYDGHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPKIQINVPEDNDMVLGM 154

Query: 120 WTRIGWEERDGIVL 133
           + R+G+E  D + L
Sbjct: 155 YERLGYEHADVLSL 168


>Z3699 [R] COG0456 Acetyltransferases
          Length = 178

 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 4/134 (2%)

Query: 1   MNYRPMTADDYEAAYRLWENTEGMNLSGADSREEILRYLERNPGMSQVA-VNGDKTLAGT 59
           M  R    +D+E    LWE  + +     D   +I R +  +  +  VA VNG+  + GT
Sbjct: 38  MEIRVFRQEDFEEVITLWERCDLLR-PWNDPEMDIERKMNHDVSLFLVAEVNGE--VVGT 94

Query: 60  AMCGHDGRRGYMYHVAVSEDGRGQGVGRELVSRCLASLLQEGIEKCHLMVIESNALGRSF 119
            M G+DG RG  Y++ V  + RG+G+   L++R    L+  G  K  + V E N +    
Sbjct: 95  VMGGYDGHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPKIQINVPEDNDMVLGM 154

Query: 120 WTRIGWEERDGIVL 133
           + R+G+E  D + L
Sbjct: 155 YERLGYEHADVLSL 168


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.318    0.135    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 11,010,719
Number of extensions: 407289
Number of successful extensions: 876
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 875
Number of HSP's successfully gapped: 7
Length of query: 139
Length of database: 38,378,431
Length adjustment: 95
Effective length of query: 44
Effective length of database: 27,421,701
Effective search space: 1206554844
Effective search space used: 1206554844
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 110 (47.0 bits)