BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0157.0029.p (277 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CAC0963 [V] COG1968 Uncharacterized bacitracin resistance protein 128 1e-29 mll4634 [V] COG1968 Uncharacterized bacitracin resistance protein 119 7e-27 AGc5051 [J] COG1670 Acetyltransferases, including N-acetylases o... 116 3e-26 AGc505 [V] COG1968 Uncharacterized bacitracin resistance protein 116 3e-26 CAC0501 [V] COG1968 Uncharacterized bacitracin resistance protein 85 2e-16 >CAC0963 [V] COG1968 Uncharacterized bacitracin resistance protein Length = 307 Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 83/233 (35%), Positives = 114/233 (48%), Gaps = 34/233 (14%) Query: 17 TEFLPVSSTGHLILSGELLGFT----------GEKADTFEIIIQLGAILAVAVIYWRRI- 65 TEFLPVSSTGH+I+ G ++GF E FEIIIQLGAILA+ V+YW +I Sbjct: 21 TEFLPVSSTGHMIILGSIIGFKEGAKPVSLYGAEYIHMFEIIIQLGAILAIVVLYWDKIF 80 Query: 66 -------------------LGLLGLVKVDSENGNTNAKQKLNLIHVILACLPAMVLGLVL 106 +G++G V N K N +++AC+PA+V+GL Sbjct: 81 SALKPSNLFPSMKEHEKSGIGVVGEFFVKGYNTMPGFKFWTN---IVVACIPAIVIGLPF 137 Query: 107 HSFIKTYLFSPYTVXXXXXXXXXXXXXXQYK-RTAIQAENIDQLSYKQAITIGLFQCLSL 165 I LF P V + K R + +++D+++ KQAI IG FQCL+L Sbjct: 138 QKKIDKLLFFPAPVAAALMVGAVWMIFAENKYRKRAKIKSVDEITIKQAIVIGCFQCLAL 197 Query: 166 WPGFSRSXXXXXXXXXXXXXXXXXXNFSFLIAIPMMVAASGYELLKSYHTLTA 218 WPG SRS FSF +AIPMM+ AS L+K+ L++ Sbjct: 198 WPGMSRSASTIIGAWIVGVATVAGAEFSFFLAIPMMLGASLLFLIKNSVVLSS 250 >mll4634 [V] COG1968 Uncharacterized bacitracin resistance protein Length = 268 Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 74/205 (36%), Positives = 109/205 (53%), Gaps = 9/205 (4%) Query: 17 TEFLPVSSTGHLILSGELLGFTGEKADTFEIIIQLGAILAVAVIYWRRILGLLGLVKVDS 76 TEF+PVSSTGH++L+G LGF FEI+IQLGAILA+ +Y+RR+ +L +D Sbjct: 19 TEFIPVSSTGHILLAGHFLGFN-STGKAFEILIQLGAILAILSVYFRRLWQML----LDL 73 Query: 77 ENGNTNAKQKLNLIHVILACLPAMVLGLVLHSFIKTYLF-SPYTVXXXXXXXXXXXXXXQ 135 + + + +I +++A LPA ++G + H FIKT LF SP + Sbjct: 74 PH---DRLTRHFVIGILIAFLPAAIIGALAHDFIKTVLFESPRLICTMLIIGGVILLAVD 130 Query: 136 YKRTAIQAENIDQLSYKQAITIGLFQCLSLWPGFSRSXXXXXXXXXXXXXXXXXXNFSFL 195 ++++ + + IGLFQCLSL PG SRS FSF Sbjct: 131 RMNLKPVYRDVERFPTRLYLQIGLFQCLSLIPGTSRSGSTIVGALLLGVDKRAAAEFSFF 190 Query: 196 IAIPMMVAASGYELLKSYHTLTASD 220 +AIP MV A ++L K+ + LT++D Sbjct: 191 LAIPTMVGAFAFDLFKNRNVLTSAD 215 >AGc5051 [J] COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins Length = 194 Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 0/262 (0%), Positives = 0/262 (0%), Gaps = 18/262 (6%) Query: 17 TEFLPVSSTGHLILSGELLGFTGEKADTFEIIIQLGAILAVAVIYWRRILGLLGLVKVDS 76 + L + G I ++ +++ + Sbjct: 19 AKLFAEEGVPVLDSDEVVHGLY-RAEAVPLIDAAFPGTTISGMVDRQKLGDV-------L 70 Query: 77 ENGNTNAKQKLNLIHVILACLPAMVLGLVLHSFIKTYLF-SPYTVXXXXXXXXXXXXXXQ 135 N + ++H ++ L L P Sbjct: 71 RKNPANFNRLEEIVHPLVRNRQEAFLAKARIDDRAFALLDIPLLFETGAEGRVDKVVVVS 130 Query: 136 YKRTAIQAENIDQLSYKQ--AITIGLFQCLSLWPGFSRSXXXXXXXXXXXXXXXXXXNFS 193 + + Sbjct: 131 --CAPEIQRERVLSRPGMTEEKFEMILARQMPDAEKRQRADFVVDSGNGVEAARDQVKEI 188 Query: 194 FLIAIPMMVAASGYELLKSYHTLTASDAGFFITGXXXXXXXXXXXXXXXXKLLXXXXLER 253 Sbjct: 189 ----- 243 Query: 254 LKLAPFAYYRFVLAAVFLIYLI 275 Sbjct: 244 265 >AGc505 [V] COG1968 Uncharacterized bacitracin resistance protein Length = 133 Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 0/262 (0%), Positives = 0/262 (0%), Gaps = 18/262 (6%) Query: 17 TEFLPVSSTGHLILSGELLGFTGEKADTFEIIIQLGAILAVAVIYWRRILGLLGLVKVDS 76 V + +II + + + Sbjct: 19 ALEHVVGPQKLIETVCIGPEDD-MDQRRQDIIDAVARANDGNGVIILTDMFG-------G 70 Query: 77 ENGNTNAKQKLNLIHVILACLPAMVLGLVLHSFIKTYLF-SPYTVXXXXXXXXXXXXXXQ 135 N N ++A + +L + + + + Sbjct: 71 TPSNLAISVMNNGNVEVIAGVNLPMLIKLAGVRSEDNMDKALQDASDAGRKYINVASRVL 130 Query: 136 YKRTAIQAENIDQLSYKQ--AITIGLFQCLSLWPGFSRSXXXXXXXXXXXXXXXXXXNFS 193 Sbjct: 131 -- 188 Query: 194 FLIAIPMMVAASGYELLKSYHTLTASDAGFFITGXXXXXXXXXXXXXXXXKLLXXXXLER 253 Sbjct: 189 ----- 243 Query: 254 LKLAPFAYYRFVLAAVFLIYLI 275 Sbjct: 244 265 >CAC0501 [V] COG1968 Uncharacterized bacitracin resistance protein Length = 274 Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 69/266 (25%), Positives = 120/266 (45%), Gaps = 19/266 (7%) Query: 17 TEFLPVSSTGHLILSGELLGFTGEKA--DTFEIIIQLGAILAVAVIYWRRILGLLGLVKV 74 TE+LP+SSTGH+IL E + +A F ++IQLGAIL+V ++Y+ +++ Sbjct: 19 TEWLPISSTGHMILVNEFIRLNVTEAFKQVFLVVIQLGAILSVVLLYFNKLIPF------ 72 Query: 75 DSENGNTNAKQKL--NLIHVILACLPAMVLGLVLHSFIKTYLFSPYTVXXXXXXXXXXXX 132 S NG K+ + I +I++C+PA ++G+ I ++ TV Sbjct: 73 -SLNGGFYLKKDVVSMWIKIIISCIPATIVGIPFDDKIDALFYNYQTVSITLISFGILFI 131 Query: 133 XXQ--YKRTAIQAENIDQLSYKQAITIGLFQCL-SLWPGFSRSXXXXXXXXXXXXXXXXX 189 + K + +I +++Y A+ IG+FQ + +++PG SRS Sbjct: 132 MIENHNKGKHPRITSISEITYTTAVLIGIFQLIAAVFPGTSRSGATIVGALLIGVSRTVA 191 Query: 190 XNFSFLIAIPMMVAASGYELLKSYHTLTASDAGFFITGXXXXXXXXXXXXXXXXKLLXXX 249 ++F +AIP+M AS +L K T+++ G K L Sbjct: 192 AEYTFFLAIPVMFGASLLKLFKFGLHFTSTEITILFIG----MLSAFIVSILAIKFL-MI 246 Query: 250 XLERLKLAPFAYYRFVLAAVFLIYLI 275 ++R F +YR +L L+Y + Sbjct: 247 YIKRHDFKAFGWYRIILGCAVLVYFL 272 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.327 0.142 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 14,606,028 Number of extensions: 474946 Number of successful extensions: 948 Number of sequences better than 1.0e-05: 11 Number of HSP's gapped: 920 Number of HSP's successfully gapped: 11 Length of query: 277 Length of database: 38,378,431 Length adjustment: 105 Effective length of query: 172 Effective length of database: 26,268,361 Effective search space: 4518158092 Effective search space used: 4518158092 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 115 (48.9 bits)