BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0157.0023.p (173 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BH1868 [J] COG1670 Acetyltransferases, including N-acetylases of... 130 1e-30 AGl1212gl [J] COG1670 Acetyltransferases, including N-acetylases... 92 3e-19 alr7052 [J] COG1670 Acetyltransferases, including N-acetylases o... 87 1e-17 L1014 [J] COG1670 Acetyltransferases, including N-acetylases of ... 80 2e-15 ML1014 [K] COG0568 DNA-directed RNA polymerase, sigma subunit (s... 80 2e-15 >BH1868 [J] COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins Length = 163 Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 62/150 (41%), Positives = 93/150 (62%) Query: 7 IVIETARLNIRKYTDEDTAALSAILSDPLTMAFWPAPFTSRQTEEWIERNIQSYLTQGFG 66 +++ET RL +R++ + D L ++ SD TM+++PAPF QTE W+ RN Q Y G+G Sbjct: 1 MILETERLFLREFIETDIPTLHSLYSDAETMSYYPAPFRYEQTESWVSRNQQRYKRDGYG 60 Query: 67 RWAVELKETGRLIGDAGIIKLELNGRVENDLGYIIHSDYWRQGYAYEAAKSILNYAIQEL 126 WAV LKET IGD G++K + G+ ++GY IH +YW +G+A EAAK+ +Y L Sbjct: 61 LWAVCLKETDECIGDCGLVKQLIEGQTHVEIGYHIHKNYWCRGFATEAAKACKSYGFDAL 120 Query: 127 GLDRICINMPADHVASEGVAIKLGLKKETE 156 GLD++ + + AS VA +G +E E Sbjct: 121 GLDKLISIIDPANTASIRVAENIGFTREKE 150 >AGl1212gl [J] COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins Length = 134 Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 0/155 (0%), Positives = 0/155 (0%), Gaps = 2/155 (1%) Query: 7 IVIETARLNIRKYTDEDTAALSAILSDPLTMAFWPAPFTSRQTEEWIER-NIQSYLTQGF 65 I + + P+ A F + + Sbjct: 5 IAVLGLITFSSPAFAASCEKNFTVSGVPMVTAVSYKSFQELPKAKAPAVLQKLAQAVAAE 64 Query: 66 GRWAVELKETGRLIGDAGIIKLELNGRVENDLGYIIHSDYWRQGYAYEAAKSILNYAIQE 125 G +++ + I + + + A I + + Sbjct: 65 GFSGIQINKALSSIDAHQETSGSGRIQTLRVVARQKGAAVRIDAVFNIQAGQIADKDVIR 124 Query: 126 LGLDRICINMPADHVASEGVAIKLGLKKETEYRNR 160 Sbjct: 125 - 158 >alr7052 [J] COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins Length = 359 Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 12/155 (7%), Positives = 29/155 (18%), Gaps = 4/155 (2%) Query: 6 MIVIETARLNIRKYTDEDTAALSAILSDPLTMAF--WPAPFTSRQTEEWIERNIQSYLTQ 63 M + A S + + + + Sbjct: 1 MQAATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPDADAFGVARL 60 Query: 64 GFGRWAVELKETGRLIGDAGIIKLELNGRVENDLGYIIHSDYWRQGYAYEAAKSILNYAI 123 T ++ G + + + + + A S+ Sbjct: 61 EEALRLRAGGITKPVLLLEGFFDARDLPTIS--AQHFHTAVHNEEQLAALEEASLDEPVT 118 Query: 124 QELGLDRICINMPADHVASEGVAIKLGLKKETEYR 158 + LD + +E +L K Sbjct: 119 VWMKLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQP 153 >L1014 [J] COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins Length = 193 Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 76/143 (53%), Gaps = 3/143 (2%) Query: 8 VIETARLNIRKYTDEDTAALSAILSDPLTMAFWPAPFTSRQTEEWIERNIQSYLTQGFGR 67 +IET RL +R + +D + +P + F AP S + N Y+ G+ Sbjct: 12 IIETKRLLLRPFDLKDAEDMFDYSGNPENLKFVFAPHLSLSETRFSIAN--DYMKSPLGK 69 Query: 68 WAVELKETGRLIGDAGIIKLELNGRVENDLGYIIHSDYWRQGYAYEAAKSILNYAIQELG 127 WA+ELK RLIGD +K+ + ++GY+++ +YW QG EA K + ++ ++ G Sbjct: 70 WAIELKSEHRLIGDIHFVKIS-DKNQSAEIGYVLNQNYWNQGLLTEALKVLTEFSFEQFG 128 Query: 128 LDRICINMPADHVASEGVAIKLG 150 L ++ + + ++V S+ VA+K G Sbjct: 129 LKKLILLIDKENVPSKKVALKSG 151 >ML1014 [K] COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) Length = 193 Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 76/143 (53%), Gaps = 3/143 (2%) Query: 8 VIETARLNIRKYTDEDTAALSAILSDPLTMAFWPAPFTSRQTEEWIERNIQSYLTQGFGR 67 +IET RL +R + +D + +P + F AP S + N Y+ G+ Sbjct: 12 IIETKRLLLRPFDLKDAEDMFDYSGNPENLKFVFAPHLSLSETRFSIAN--DYMKSPLGK 69 Query: 68 WAVELKETGRLIGDAGIIKLELNGRVENDLGYIIHSDYWRQGYAYEAAKSILNYAIQELG 127 WA+ELK RLIGD +K+ + ++GY+++ +YW QG EA K + ++ ++ G Sbjct: 70 WAIELKSEHRLIGDIHFVKIS-DKNQSAEIGYVLNQNYWNQGLLTEALKVLTEFSFEQFG 128 Query: 128 LDRICINMPADHVASEGVAIKLG 150 L ++ + + ++V S+ VA+K G Sbjct: 129 LKKLILLIDKENVPSKKVALKSG 151 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.319 0.135 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 12,865,788 Number of extensions: 487915 Number of successful extensions: 1090 Number of sequences better than 1.0e-05: 42 Number of HSP's gapped: 1070 Number of HSP's successfully gapped: 42 Length of query: 173 Length of database: 38,378,431 Length adjustment: 99 Effective length of query: 74 Effective length of database: 26,960,365 Effective search space: 1995067010 Effective search space used: 1995067010 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 112 (47.8 bits)