BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0157.0008.p (275 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CAC0963 [V] COG1968 Uncharacterized bacitracin resistance protein 152 8e-37 CAC0501 [V] COG1968 Uncharacterized bacitracin resistance protein 138 7e-33 mll4634 [V] COG1968 Uncharacterized bacitracin resistance protein 134 2e-31 AGc5051 [J] COG1670 Acetyltransferases, including N-acetylases o... 132 4e-31 AGc505 [V] COG1968 Uncharacterized bacitracin resistance protein 132 4e-31 >CAC0963 [V] COG1968 Uncharacterized bacitracin resistance protein Length = 307 Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 104/283 (36%), Positives = 158/283 (55%), Gaps = 31/283 (10%) Query: 7 IILAIVEGITEFIPVSSTGHMILTTKLLGFDE-QSPI-------MKTYEIVIQLGAILAI 58 I+ I+EG+TEF+PVSSTGHMI+ ++GF E P+ + +EI+IQLGAILAI Sbjct: 12 ILEGIIEGVTEFLPVSSTGHMIILGSIIGFKEGAKPVSLYGAEYIHMFEIIIQLGAILAI 71 Query: 59 ALVYRQRIL------NLLGIGRSRTGRG-GVV-----------PASRLNLIHVILGIVPA 100 ++Y +I NL + G GVV P + ++++ +PA Sbjct: 72 VVLYWDKIFSALKPSNLFPSMKEHEKSGIGVVGEFFVKGYNTMPGFKF-WTNIVVACIPA 130 Query: 101 LAVAF-FARDFIKGLFGASTVLWALVAGGVLMIVAEWVNRRKIRITAHELDDLSYGQALA 159 + + F + K LF + V AL+ G V MI AE N+ + R +D+++ QA+ Sbjct: 131 IVIGLPFQKKIDKLLFFPAPVAAALMVGAVWMIFAE--NKYRKRAKIKSVDEITIKQAIV 188 Query: 160 IGLYQIISVLWPGFSRSGSTISGGMLSGVSYKASADFSFLIAIPIMCAASGYELLDSYQY 219 IG +Q ++ LWPG SRS STI G + GV+ A A+FSF +AIP+M AS L+ + Sbjct: 189 IGCFQCLA-LWPGMSRSASTIIGAWIVGVATVAGAEFSFFLAIPMMLGASLLFLIKNSVV 247 Query: 220 FTKDTIMDFAIGFVISFIVAYLVVVAFMKLIQKIRPTHFAIYR 262 + I+ A+GF+++FIVA +VV F+ ++K FA+YR Sbjct: 248 LSSVQILGLAVGFIVAFIVALVVVDRFISFLKKKPMRIFAVYR 290 >CAC0501 [V] COG1968 Uncharacterized bacitracin resistance protein Length = 274 Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 96/270 (35%), Positives = 155/270 (57%), Gaps = 11/270 (4%) Query: 1 MDTITAIILAIVEGITEFIPVSSTGHMILTTKLLGFDEQSPIMKTYEIVIQLGAILAIAL 60 ++ + AI L IVEGITE++P+SSTGHMIL + + + + + +VIQLGAIL++ L Sbjct: 4 IEILKAIFLGIVEGITEWLPISSTGHMILVNEFIRLNVTEAFKQVFLVVIQLGAILSVVL 63 Query: 61 VYRQRILNLLGIGRSRTGRGGVVPASRLNL-IHVILGIVPALAVAFFARDFIKGLF-GAS 118 +Y +++ S G G + +++ I +I+ +PA V D I LF Sbjct: 64 LYFNKLIPF-----SLNG-GFYLKKDVVSMWIKIIISCIPATIVGIPFDDKIDALFYNYQ 117 Query: 119 TVLWALVAGGVLMIVAEWVNR-RKIRITAHELDDLSYGQALAIGLYQIISVLWPGFSRSG 177 TV L++ G+L I+ E N+ + RIT+ + +++Y A+ IG++Q+I+ ++PG SRSG Sbjct: 118 TVSITLISFGILFIMIENHNKGKHPRITS--ISEITYTTAVLIGIFQLIAAVFPGTSRSG 175 Query: 178 STISGGMLSGVSYKASADFSFLIAIPIMCAASGYELLDSYQYFTKDTIMDFAIGFVISFI 237 +TI G +L GVS +A+++F +AIP+M AS +L +FT I IG + +FI Sbjct: 176 ATIVGALLIGVSRTVAAEYTFFLAIPVMFGASLLKLFKFGLHFTSTEITILFIGMLSAFI 235 Query: 238 VAYLVVVAFMKLIQKIRPTHFAIYRFILAA 267 V+ L + M I++ F YR IL Sbjct: 236 VSILAIKFLMIYIKRHDFKAFGWYRIILGC 265 >mll4634 [V] COG1968 Uncharacterized bacitracin resistance protein Length = 268 Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 94/256 (36%), Positives = 140/256 (54%), Gaps = 18/256 (7%) Query: 16 TEFIPVSSTGHMILTTKLLGFDEQSPIMKTYEIVIQLGAILAIALVYRQRILN-LLGIGR 74 TEFIPVSSTGH++L LGF+ K +EI+IQLGAILAI VY +R+ LL + Sbjct: 19 TEFIPVSSTGHILLAGHFLGFNSTG---KAFEILIQLGAILAILSVYFRRLWQMLLDLPH 75 Query: 75 SRTGRGGVVPASRLNLIHVILGIVPALAVAFFARDFIKGLFGASTVLWA--LVAGGVLMI 132 R R V I +++ +PA + A DFIK + S L L+ GGV+++ Sbjct: 76 DRLTRHFV--------IGILIAFLPAAIIGALAHDFIKTVLFESPRLICTMLIIGGVILL 127 Query: 133 VAEWVNRRKIRITAHELDDLSYGQALAIGLYQIISVLWPGFSRSGSTISGGMLSGVSYKA 192 V+R ++ +++ L IGL+Q +S++ PG SRSGSTI G +L GV +A Sbjct: 128 A---VDRMNLKPVYRDVERFPTRLYLQIGLFQCLSLI-PGTSRSGSTIVGALLLGVDKRA 183 Query: 193 SADFSFLIAIPIMCAASGYELLDSYQYFTKDTIMDFAIGFVISFIVAYLVVVAFMKLIQK 252 +A+FSF +AIP M A ++L + T + AIGFV +F+ A VV + + + Sbjct: 184 AAEFSFFLAIPTMVGAFAFDLFKNRNVLTSADLPIIAIGFVAAFVTALFVVRYLLDYVSR 243 Query: 253 IRPTHFAIYRFILAAV 268 + F +R ++ V Sbjct: 244 NGYSLFGWWRLVVGIV 259 >AGc5051 [J] COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins Length = 194 Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 0/267 (0%), Positives = 0/267 (0%), Gaps = 16/267 (5%) Query: 4 ITAIILAIVEGITEFIPVSSTGHMILTTKLLGFDEQSPIMKTYEIVIQLGAILAIALVYR 63 +T I + + + G I +V R Sbjct: 7 LTGSIGMGKTTTAKLFAEEGVPVLDSDEVVHGL--YRA-EAVPLIDAAFPGTTISGMVDR 63 Query: 64 QRILNLLGIGRSRTGRGGVVPASRLNLIHVILGIVPALAVAFFARDFIKGLFGASTVLWA 123 Q++ ++ ++H ++ +A D +L+ Sbjct: 64 QKLGDV-LRKNPANFN------RLEEIVHPLVRNRQEAFLAKARIDDRAFALLDIPLLFE 116 Query: 124 --LVAGGVLMIVAEWVNRRKIRITAHELDDLSYGQALAIGLYQIISVLWPGFSRSGSTIS 181 ++V V+ L + + + + Sbjct: 117 TGAEGRVDKVVV---VSCAPEIQRERVLSRPGMTEEKFEMILARQMPD-AEKRQRADFVV 172 Query: 182 GGMLSGVSYKASADFSFLIAIPIMCAASGYELLDSYQYFTKDTIMDFAIGFVISFIVAYL 241 Sbjct: 173 232 Query: 242 VVVAFMKLIQKIRPTHFAIYRFILAAV 268 Sbjct: 233 259 >AGc505 [V] COG1968 Uncharacterized bacitracin resistance protein Length = 133 Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 0/267 (0%), Positives = 0/267 (0%), Gaps = 16/267 (5%) Query: 4 ITAIILAIVEGITEFIPVSSTGHMILTTKLLGFDEQSPIMKTYEIVIQLGAILAIALVYR 63 +T LA V + + +I+ + V Sbjct: 7 VTHGKLAEEFRHALEHVVGPQKLIETVCIGPED--DMD-QRRQDIIDAVARANDGNGVII 63 Query: 64 QRILNLLGIGRSRTGRGGVVPASRLNLIHVILGIVPALAVAFFARDFIKGLFGASTVLWA 123 + G + N ++ V + A + + + Sbjct: 64 LTDMFG-GTPSNLAIS------VMNNGNVEVIAGVNLPMLIKLAGVRSEDNMDKALQDAS 116 Query: 124 --LVAGGVLMIVAEWVNRRKIRITAHELDDLSYGQALAIGLYQIISVLWPGFSRSGSTIS 181 + Sbjct: 117 DAGRKYINVASR---- 172 Query: 182 GGMLSGVSYKASADFSFLIAIPIMCAASGYELLDSYQYFTKDTIMDFAIGFVISFIVAYL 241 Sbjct: 173 232 Query: 242 VVVAFMKLIQKIRPTHFAIYRFILAAV 268 Sbjct: 233 259 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.331 0.144 0.424 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 19,676,044 Number of extensions: 821698 Number of successful extensions: 2215 Number of sequences better than 1.0e-05: 12 Number of HSP's gapped: 2191 Number of HSP's successfully gapped: 12 Length of query: 275 Length of database: 38,378,431 Length adjustment: 105 Effective length of query: 170 Effective length of database: 26,268,361 Effective search space: 4465621370 Effective search space used: 4465621370 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.9 bits) S2: 115 (48.9 bits)