BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0154.0001.p
         (176 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DR0255 [L] COG3335 Transposase and inactivated derivatives             79   3e-15
AF2139 [L] COG3335 Transposase and inactivated derivatives             68   8e-12
AF1352 [L] COG3335 Transposase and inactivated derivatives             68   8e-12
DRB0120m_2 [L] COG3335 Transposase and inactivated derivatives         66   3e-11
DR2425 [L] COG3335 Transposase and inactivated derivatives             66   3e-11

>DR0255 [L] COG3335 Transposase and inactivated derivatives
          Length = 172

 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 88/169 (52%), Gaps = 6/169 (3%)

Query: 8   LLFEDESMIRDYQAIQKTWFLRGKQRIIPTTGKHRGVKLLATVDYGTGKIVWQE-DEQYT 66
           L+F DES       + +TW +RG+  II        +  +  +   TG+ + Q       
Sbjct: 3   LVFLDESGFSLKPTVTRTWAVRGQTPIITAKASWDKLSTIGAITT-TGQFLQQTYPGAIR 61

Query: 67  AETFLSFLKKVIDEYPTGKIVMVLDNARIHHAELLTPFLTEMKERLELVFLPPYSPQFNA 126
            +  ++F + ++  +  GK+V+++DNARIH  + L  F+ E + RL + +LPPY+P+ N 
Sbjct: 62  GQQVVAFCRHLL-RHVQGKLVVLMDNARIHKTKALRAFV-EQQPRLTVEYLPPYAPELNP 119

Query: 127 VEGLWKWLKSDVINNVFYHTVTEIRTNVQQFMEEI--MKVPLTIIDRLC 173
           +E +W ++K  V+ N    TV E++  +    + +  +++P  +  R C
Sbjct: 120 IERVWAYIKGSVLGNFCPKTVGELKARLNSAWQRVRYIRLPQRLTHRYC 168


>AF2139 [L] COG3335 Transposase and inactivated derivatives
          Length = 182

 Score = 67.8 bits (164), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 6/87 (6%)

Query: 54  TGKIVWQEDEQYTAETFLSFLKKVIDEYPTGKIVMVLDNARIHHAELLTPFLTEMKERL- 112
            GK V +  +   +E F+SFL+K+ +E P  +IV+VLDN + HHA+     + E  E+L 
Sbjct: 54  NGKSVIEFLKSNRSEDFISFLRKIREENPKKRIVIVLDNFKTHHAKK----VKEEAEKLS 109

Query: 113 -ELVFLPPYSPQFNAVEGLWKWLKSDV 138
             LV+LPPYSP  N +E +WK +K  V
Sbjct: 110 ISLVYLPPYSPDLNPIENVWKSVKRAV 136


>AF1352 [L] COG3335 Transposase and inactivated derivatives
          Length = 182

 Score = 67.8 bits (164), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 6/87 (6%)

Query: 54  TGKIVWQEDEQYTAETFLSFLKKVIDEYPTGKIVMVLDNARIHHAELLTPFLTEMKERL- 112
            GK V +  +   +E F+SFL+K+ +E P  +IV+VLDN + HHA+     + E  E+L 
Sbjct: 54  NGKSVIEFLKSNRSEDFISFLRKIREENPKKRIVIVLDNFKTHHAKK----VKEEAEKLS 109

Query: 113 -ELVFLPPYSPQFNAVEGLWKWLKSDV 138
             LV+LPPYSP  N +E +WK +K  V
Sbjct: 110 ISLVYLPPYSPDLNPIENVWKSVKRAV 136


>DRB0120m_2 [L] COG3335 Transposase and inactivated derivatives
          Length = 190

 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 56/89 (62%), Gaps = 3/89 (3%)

Query: 84  GKIVMVLDNARIHHAELLTPFLTEMKERLELVFLPPYSPQFNAVEGLWKWLKSDVINNVF 143
           G++V+VLDNA IH ++    F+ E  ERL LVFLPPY+P+ N +E +W ++K + + N  
Sbjct: 96  GELVVVLDNAGIHRSKATQAFV-ETHERLSLVFLPPYAPELNPIELVWAYVKRNALGNFC 154

Query: 144 YHTVTEIRTNVQQFMEEI--MKVPLTIID 170
             ++ E++  +    + +  +++P  +ID
Sbjct: 155 ARSIVELKGRLVSAWQRLRYIELPQRLID 183


>DR2425 [L] COG3335 Transposase and inactivated derivatives
          Length = 202

 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 56/89 (62%), Gaps = 3/89 (3%)

Query: 84  GKIVMVLDNARIHHAELLTPFLTEMKERLELVFLPPYSPQFNAVEGLWKWLKSDVINNVF 143
           G++V+VLDNA IH ++    F+ E  ERL LVFLPPY+P+ N +E +W ++K + + N  
Sbjct: 108 GELVVVLDNAGIHRSKATQAFV-ETHERLSLVFLPPYAPELNPIELVWAYVKRNALGNFC 166

Query: 144 YHTVTEIRTNVQQFMEEI--MKVPLTIID 170
             ++ E++  +    + +  +++P  +ID
Sbjct: 167 ARSIVELKGRLVSAWQRLRYIELPQRLID 195


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.324    0.139    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 13,212,757
Number of extensions: 536081
Number of successful extensions: 2181
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 2177
Number of HSP's successfully gapped: 18
Length of query: 176
Length of database: 38,378,431
Length adjustment: 99
Effective length of query: 77
Effective length of database: 26,960,365
Effective search space: 2075948105
Effective search space used: 2075948105
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 112 (47.8 bits)