BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0153.0051.p
         (643 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VC0613 [G] COG3525 N-acetyl-beta-hexosaminidase                        68   5e-11
VC2217 [G] COG3525 N-acetyl-beta-hexosaminidase                        52   3e-06

>VC0613 [G] COG3525 N-acetyl-beta-hexosaminidase
          Length = 637

 Score = 67.8 bits (164), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 38/250 (15%)

Query: 76  FSYSPLLPAQGYEIHVDENGIAVNYGSPEGAYYAAATLKQILQ--QCGRSLPFVHISDQP 133
           +  +P L    Y+++++  GI +  GS  G  +A+ATL Q+ Q  Q     P V+I D P
Sbjct: 197 YRSNPTLDEGHYQLNIEAQGIKIEAGSHSGFMHASATLLQLAQAHQGSLRFPLVNIVDAP 256

Query: 134 DFAARGLMIDISRNKIPKLETLFRIVDFMADLKLNQLQLYI---EGSPFAYESFPQV--- 187
            F  RG+M+D +R+    LE + R+++ +A  K N    ++   EG     +  PQ+   
Sbjct: 257 RFKYRGMMLDCARH-FHSLEQVKRVINQLAHYKFNVFHWHLTDDEGWRIEIKRLPQLTDI 315

Query: 188 --W----ELETP------------ITGEEILQLDAYCQERYIELVPNQNSFGHMEGWLTR 229
             W    E+  P             T +EI  +  Y  +R I ++P  +  GH       
Sbjct: 316 GAWRGMDEVLEPQYSLLTERHGGFYTQDEIRAVIEYASDRGITVIPEIDVPGHSRA---- 371

Query: 230 PEFNALAEIPEGFMLPENMYDSDMYPEGLFMHPGTFHTENPEVLQLLATMYDDLLPYFTS 289
               A+  +P   +  E   D   Y    + +        P   Q L  + +++   F S
Sbjct: 372 ----AIKALPAWLVDEE---DCSQYRSIQYYNDNVLSPALPGTYQFLDIVLEEVAALFPS 424

Query: 290 KYFNVGCDET 299
           ++ ++G DE 
Sbjct: 425 QFIHIGADEV 434


>VC2217 [G] COG3525 N-acetyl-beta-hexosaminidase
          Length = 883

 Score = 52.4 bits (124), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 7/171 (4%)

Query: 65  GTRPAVRSVYHFSYSPLLPAQG-YEIHVDENGIAVNYGSPEGAYYAAATLKQILQQCGRS 123
           G  PA   +   S+   L   G Y + + +  + V      GA+YA  +L  ++     +
Sbjct: 260 GVMPAQVIINPKSFKGDLAKSGAYRLAITDKAVKVTAFDQAGAFYAMQSLLGLVDMADAT 319

Query: 124 -LPFVHISDQPDFAARGLMIDISRNKIPKLETLFRIVDFMADLKLNQLQLYIEGSPFAYE 182
            LP V I D P F  RG+M+D++RN   K + +   +D MA  K+N+L L++        
Sbjct: 320 QLPKVEIVDAPRFDYRGVMVDVARNFHSK-QAILATLDQMAAYKMNKLHLHLTDDEGWRI 378

Query: 183 SFPQVWELETPITGEEILQ-LDAYCQERYIELVPNQNSFGHMEGWLTRPEF 232
             P + EL T I  +      +  C    +   PN ++FG   G+ T+ ++
Sbjct: 379 EIPGLPEL-TDIGAQRCFDPSETECVLPQLGSGPNADNFG--SGYFTKQDY 426


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.321    0.138    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 47,110,047
Number of extensions: 2067593
Number of successful extensions: 3577
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 3577
Number of HSP's successfully gapped: 2
Length of query: 643
Length of database: 38,378,431
Length adjustment: 113
Effective length of query: 530
Effective length of database: 25,345,689
Effective search space: 13433215170
Effective search space used: 13433215170
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 119 (50.4 bits)