BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0153.0045.p (213 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CAC3040 [D] COG0489 ATPases involved in chromosome partitioning 134 1e-31 CAC3043 [D] COG0489 ATPases involved in chromosome partitioning 125 4e-29 BS_ywqD [D] COG0489 ATPases involved in chromosome partitioning 125 5e-29 BH3668 [D] COG0489 ATPases involved in chromosome partitioning 123 2e-28 Cgl0343_2 [D] COG0489 ATPases involved in chromosome partitioning 119 2e-27 >CAC3040 [D] COG0489 ATPases involved in chromosome partitioning Length = 232 Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 73/206 (35%), Positives = 119/206 (57%), Gaps = 3/206 (1%) Query: 8 LITDLNPSSHISESFRSLRTYIRQLGLLKGSGGQALLFTSAEGGEGKTTILSNLAVSFVQ 67 LI NP S ++ES+R+LR+ I+ + +L TS+ GEGK+T +NLA++ + Sbjct: 2 LIVKDNPKSPVAESYRTLRSNIQFSSF--DEEIRVILVTSSGPGEGKSTTAANLALAMAE 59 Query: 68 DGKKVVVVDCNLRHPGLHSVFEVEGSHGLAAYLGGREEVKDIAVYGNLANLAVIPAGITS 127 G +V++VDC+LR P +H F++ S GL+ + G+ + +D A Y N L V+ +G Sbjct: 60 TGNQVLIVDCDLRKPSIHKKFKLSNSSGLSNIIAGQAKFEDSAHYFN-KKLCVLTSGKIP 118 Query: 128 VSPPDLLGSDKMAALLEELKSSFDLILLDAPQAVEFSDARILAPLSDGLIIVARHGKTKR 187 +P ++L S KM L E K F I+LD P + +D +IL+ + DG+I+V G + Sbjct: 119 PNPAEMLASHKMKEFLNESKGVFKYIILDTPPIIAVTDPQILSTMVDGVILVVSSGVAEI 178 Query: 188 ESLKKLKGLMEQTGVKILGIAMNQTR 213 E+ K+ K L+E ILG +N+ + Sbjct: 179 EAAKRAKELLENVNANILGTVLNKVK 204 >CAC3043 [D] COG0489 ATPases involved in chromosome partitioning Length = 224 Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 117/204 (57%), Gaps = 3/204 (1%) Query: 8 LITDLNPSSHISESFRSLRTYIRQLGLLKGSGGQALLFTSAEGGEGKTTILSNLAVSFVQ 67 L+ P S I+E++R+LR+ I+ K Q +L TS+ GEGK+T NLA++ + Sbjct: 2 LVVKDKPKSPIAEAYRTLRSNIQFSSFDKDM--QLILVTSSGPGEGKSTTSCNLALAMAE 59 Query: 68 DGKKVVVVDCNLRHPGLHSVFEVEGSHGLAAYLGGREEVKDIAVYGNLANLAVIPAGITS 127 G V+++DC+LR P +H F++ + GL+ L G + ++ + + + NL ++ AG Sbjct: 60 AGNSVLLMDCDLRKPSVHKKFKISNNDGLSNVLAGHTKFENASNWYS-KNLCILTAGKIP 118 Query: 128 VSPPDLLGSDKMAALLEELKSSFDLILLDAPQAVEFSDARILAPLSDGLIIVARHGKTKR 187 +P ++L S +M A L E + F I+LDAP + +D +IL+ + DG+I+V G Sbjct: 119 PNPAEMLASKRMKAFLAEARGVFKYIILDAPPVIAVTDPQILSTMVDGVILVVTSGVADI 178 Query: 188 ESLKKLKGLMEQTGVKILGIAMNQ 211 E+ K+ K L+E I+G +N+ Sbjct: 179 EAAKRAKELLENVNANIIGSVLNR 202 >BS_ywqD [D] COG0489 ATPases involved in chromosome partitioning Length = 237 Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 72/214 (33%), Positives = 120/214 (56%), Gaps = 14/214 (6%) Query: 3 RLNKSLITDLNPSSHISESFRSLRTYI------RQLGLLKGSGGQALLFTSAEGGEGKTT 56 R+ +++I P S SE +R++RT I RQ+ ++++ TSA GEGK+T Sbjct: 10 RMQRNVIAMTEPKSLNSEQYRTIRTNIEFASVDRQM--------KSVMITSACPGEGKST 61 Query: 57 ILSNLAVSFVQDGKKVVVVDCNLRHPGLHSVFEVEGSHGLAAYLGGREEVKDIAVYGNLA 116 +NLAV F Q GKKV+++D +LR P +H+ F +E + GL + L + ++ N Sbjct: 62 TAANLAVVFAQQGKKVLLIDADLRKPTVHTAFFLENTVGLTSVLLKKSSMEQAVQASNEK 121 Query: 117 NLAVIPAGITSVSPPDLLGSDKMAALLEELKSSFDLILLDAPQAVEFSDARILAPLSDGL 176 +L V+ +G +P +LL S M L E +++D+++ D P + +DA+IL ++DG Sbjct: 122 HLDVLTSGPIPPNPAELLSSKWMKELAYEACAAYDMVIFDTPPILAVADAQILGNVADGS 181 Query: 177 IIVARHGKTKRESLKKLKGLMEQTGVKILGIAMN 210 ++V GKT++E K K + K+LG MN Sbjct: 182 VLVISSGKTEKEQAAKAKEALATCKSKLLGAIMN 215 >BH3668 [D] COG0489 ATPases involved in chromosome partitioning Length = 235 Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 120/211 (56%), Gaps = 14/211 (6%) Query: 6 KSLITDLNPSSHISESFRSLRTYI------RQLGLLKGSGGQALLFTSAEGGEGKTTILS 59 + LIT + +S ISE +R++RT I R+L + ++ TS+ GEGK+T + Sbjct: 15 RELITHIKKNSPISEQYRTIRTNIEFAAVDREL--------KTIVVTSSGPGEGKSTTSA 66 Query: 60 NLAVSFVQDGKKVVVVDCNLRHPGLHSVFEVEGSHGLAAYLGGREEVKDIAVYGNLANLA 119 NLAV Q+G V+ VD +LR P H F + GL L +E +++ + NL+ Sbjct: 67 NLAVVMAQNGHNVLFVDADLRKPTAHYTFRAVNTRGLTRVLMRQETLEEAIQETKVENLS 126 Query: 120 VIPAGITSVSPPDLLGSDKMAALLEELKSSFDLILLDAPQAVEFSDARILAPLSDGLIIV 179 ++ +G +P +LL S M +++E++ FD++++D+P +DA+IL+ DG ++V Sbjct: 127 LLTSGPIPPNPAELLNSKMMELIIKEVRDQFDIVIIDSPPLNAVTDAQILSSKCDGTVLV 186 Query: 180 ARHGKTKRESLKKLKGLMEQTGVKILGIAMN 210 GKT++E K K L++++ +LG+ +N Sbjct: 187 ISSGKTQKEEALKAKDLLDKSNANLLGVVLN 217 >Cgl0343_2 [D] COG0489 ATPases involved in chromosome partitioning Length = 246 Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 68/200 (34%), Positives = 110/200 (55%), Gaps = 2/200 (1%) Query: 8 LITDLNPSSHISESFRSLRTYIRQLGLLKGSGGQALLFTSAEGGEGKTTILSNLAVSFVQ 67 LI P S I+ESFR+LRT ++ L + G + +SA GEGK+T NLA++ + Sbjct: 1 LIIKHKPHSPIAESFRALRTNLQFLNV--GGSSSVFVISSANPGEGKSTTSVNLALALAE 58 Query: 68 DGKKVVVVDCNLRHPGLHSVFEVEGSHGLAAYLGGREEVKDIAVYGNLANLAVIPAGITS 127 G +V +++ +LR P + VEG+ GL L G+ EV D+ L +PAG Sbjct: 59 AGSRVALIEADLRLPRVSKYLGVEGNAGLTDILIGKAEVNDVLQRWGRTQLYYLPAGRIP 118 Query: 128 VSPPDLLGSDKMAALLEELKSSFDLILLDAPQAVEFSDARILAPLSDGLIIVARHGKTKR 187 +P +LLGS +M ++ EL+ SFD +++DAP A+ +DA ++ G++I G TK+ Sbjct: 119 PNPSELLGSAEMEKVIAELEESFDYVIIDAPPALAVTDAAVIGHGKAGILIAVSAGSTKK 178 Query: 188 ESLKKLKGLMEQTGVKILGI 207 L+ +E ++G+ Sbjct: 179 PELEATLSTLENADANVVGV 198 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.317 0.136 0.371 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 15,207,071 Number of extensions: 643179 Number of successful extensions: 2216 Number of sequences better than 1.0e-05: 53 Number of HSP's gapped: 2191 Number of HSP's successfully gapped: 53 Length of query: 213 Length of database: 38,378,431 Length adjustment: 102 Effective length of query: 111 Effective length of database: 26,614,363 Effective search space: 2954194293 Effective search space used: 2954194293 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 113 (48.1 bits)