BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0153.0023.p (151 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BS_dps [P] COG0783 DNA-binding ferritin-like protein (oxidative ... 173 1e-43 BS_mrgA [P] COG0783 DNA-binding ferritin-like protein (oxidative... 147 6e-36 all4145 [P] COG0783 DNA-binding ferritin-like protein (oxidative... 100 1e-21 all0458 [P] COG0783 DNA-binding ferritin-like protein (oxidative... 96 1e-20 DR2263 [P] COG0783 DNA-binding ferritin-like protein (oxidative ... 73 1e-13 >BS_dps [P] COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) Length = 145 Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 77/142 (54%), Positives = 105/142 (73%) Query: 10 ELHTALNRQTANWTLLGVKLHHYHWYVSGPQFFTLHAKFEELYTEAATYVDDLAERLLAI 69 +L A+N+Q ANWT++ VKLH+YHWYV G FFTLH KFEELY E ATY+DDLAERLLA+ Sbjct: 4 QLIQAVNKQVANWTVMYVKLHNYHWYVKGKDFFTLHEKFEELYNETATYIDDLAERLLAL 63 Query: 70 GGQPASTMTQYLALSDLKEATGGETAQEMVAQLVKDFAVVSGELKSTISAAEELGDQPTA 129 G+P +TM + L + +KEA G ETA++MV + DF V++ ELK+ + A+E+GD+ T Sbjct: 64 NGKPIATMKESLETASVKEAAGNETAEQMVQSVYDDFTVIAEELKNGMDLADEVGDETTG 123 Query: 130 DLLIGIRTSVEKSAWMLNAFLA 151 D+L+ I ++EK WML A+L Sbjct: 124 DMLLAIHQNIEKHNWMLKAYLG 145 >BS_mrgA [P] COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) Length = 153 Score = 147 bits (371), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 72/145 (49%), Positives = 92/145 (63%) Query: 7 SHTELHTALNRQTANWTLLGVKLHHYHWYVSGPQFFTLHAKFEELYTEAATYVDDLAERL 66 + T + +LN Q +NW LL KLH +HWYV GP FFTLH KFEELY AA VD +AERL Sbjct: 9 NQTLVENSLNTQLSNWFLLYSKLHRFHWYVKGPHFFTLHEKFEELYDHAAETVDTIAERL 68 Query: 67 LAIGGQPASTMTQYLALSDLKEATGGETAQEMVAQLVKDFAVVSGELKSTISAAEELGDQ 126 LAIGGQP +T+ +Y + + + +A EMV LV D+ +S E K I AEE D Sbjct: 69 LAIGGQPVATVKEYTEHASITDGGNETSASEMVQALVNDYKQISSESKFVIGLAEENQDN 128 Query: 127 PTADLLIGIRTSVEKSAWMLNAFLA 151 TADL +G+ VEK WML+++L Sbjct: 129 ATADLFVGLIEEVEKQVWMLSSYLG 153 >all4145 [P] COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) Length = 163 Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 56/137 (40%), Positives = 77/137 (56%) Query: 14 ALNRQTANWTLLGVKLHHYHWYVSGPQFFTLHAKFEELYTEAATYVDDLAERLLAIGGQP 73 L+R A+ L +K H++HW V+GP F TLH FE YTE A VD +AER+ A+G Sbjct: 25 GLSRLLADTYTLYLKTHNFHWNVTGPMFQTLHLMFETQYTELALAVDLVAERIRALGYPA 84 Query: 74 ASTMTQYLALSDLKEATGGETAQEMVAQLVKDFAVVSGELKSTISAAEELGDQPTADLLI 133 T ++Y LS + E G A+EM+ LV+ V +S +E+ D+PTADLL Sbjct: 85 PGTYSEYAKLSSIPETPGVPKAKEMIRLLVEGQEAVVRTARSIFPVVDEVNDEPTADLLT 144 Query: 134 GIRTSVEKSAWMLNAFL 150 EK+AWML + L Sbjct: 145 QRMQVHEKTAWMLRSLL 161 >all0458 [P] COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) Length = 179 Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 56/138 (40%), Positives = 79/138 (57%), Gaps = 2/138 (1%) Query: 15 LNRQTANWTLLGVKLHHYHWYVSGPQFFTLHAKFEELYTEAATYVDDLAERLLAIGGQPA 74 LN+ A+ LL VK YHW V GPQF +LH +EE Y + +D +AER+ +GG P Sbjct: 20 LNQDLADSYLLLVKTKKYHWDVVGPQFRSLHQLWEEHYEKLTENIDAIAERVRTLGGYPI 79 Query: 75 STMTQYLALSDLKEATGG-ETAQEMVAQLVKDFAVVSGELKSTIS-AAEELGDQPTADLL 132 +M +L L+ LKE G +A MVA LV+D + L+ + + +E DQ TAD L Sbjct: 80 GSMEGFLQLATLKEHAGDVPSATGMVANLVQDHEQLIRNLRDHVDRSGDEFQDQGTADFL 139 Query: 133 IGIRTSVEKSAWMLNAFL 150 G+ E+ AWML +F+ Sbjct: 140 TGLMEEHEEIAWMLRSFI 157 >DR2263 [P] COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) Length = 207 Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 5/139 (3%) Query: 15 LNRQTANWTLLGVKLHHYHWYVSGPQFFTLHAKFEELYTEAATYVDDLAERLLAIGGQP- 73 L R A L +K YHW + G F LH ++E E +D+ AERL+A+GG P Sbjct: 65 LQRNLATTISLYLKFKKYHWDIRGRFFRDLHLAYDEFIAEIFPSIDEQAERLVALGGSPL 124 Query: 74 --ASTMTQYLALSDLKEATGGETAQEMVAQLVKDFAVVSGELKSTISAAEELGDQPTADL 131 + + +Y + +E A+ VA LV+D + V + A +E D TAD+ Sbjct: 125 AAPADLARYSTVQVPQETV--RDARTQVADLVQDLSRVGKGYRDDSQACDEANDPVTADM 182 Query: 132 LIGIRTSVEKSAWMLNAFL 150 G +++K WML A + Sbjct: 183 YNGYAATIDKIRWMLQAIM 201 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.316 0.128 0.365 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 11,072,184 Number of extensions: 406029 Number of successful extensions: 863 Number of sequences better than 1.0e-05: 13 Number of HSP's gapped: 856 Number of HSP's successfully gapped: 13 Length of query: 151 Length of database: 38,378,431 Length adjustment: 97 Effective length of query: 54 Effective length of database: 27,191,033 Effective search space: 1468315782 Effective search space used: 1468315782 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 111 (47.4 bits)