BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0153.0005.p (254 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value all4345 [G] COG0726 Predicted xylanase/chitin deacetylase 156 3e-38 BH1917 [G] COG0726 Predicted xylanase/chitin deacetylase 143 3e-34 alr1793 [G] COG0726 Predicted xylanase/chitin deacetylase 133 3e-31 SPy1370_2 [G] COG0726 Predicted xylanase/chitin deacetylase 122 8e-28 alr1669 [G] COG0726 Predicted xylanase/chitin deacetylase 121 1e-27 >all4345 [G] COG0726 Predicted xylanase/chitin deacetylase Length = 305 Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 82/196 (41%), Positives = 115/196 (58%), Gaps = 6/196 (3%) Query: 48 QKVIALTFDDGPDPSETDQILDVLQQYNAKCTFFAIGKRIAAYPDVARRVITEGHELANH 107 QKVIALTFDDGP P T Q+LD+L+Q N K TFF +G+ + YPD+ RRV EGH + NH Sbjct: 105 QKVIALTFDDGPWPESTTQVLDILKQNNIKATFFVVGQNVKNYPDLLRRVAAEGHAIGNH 164 Query: 108 TYNHVY-FKKPVSXXXXXXXXXXXXXXXXXVSGRHSSLFRPPGGMYDETLVDVSNSMGLK 166 T++H Y F P ++G + LFRPPGGM + LV + + Sbjct: 165 TWHHWYHFMNP---QVAAYEVNNTTNLIYQITGVKTDLFRPPGGMMNNGLVSYARNNKYA 221 Query: 167 PVLWSWHQDTRDWNRPGVYSISSRVIRNARNGDIVLFHDHVHGQSQTREALKIILPELQK 226 ++WS D+ D++RP V + + V R A+ G IVL HD ++QT +AL I+ +K Sbjct: 222 VIMWS--SDSIDYSRPSVPRLINNVFRLAKPGGIVLMHDGGGNRTQTVQALPEIIARFRK 279 Query: 227 RGFRFVTVSELIRLSD 242 +G+ FVTV EL+ + D Sbjct: 280 QGYSFVTVPELLEMQD 295 >BH1917 [G] COG0726 Predicted xylanase/chitin deacetylase Length = 276 Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 80/198 (40%), Positives = 108/198 (54%), Gaps = 7/198 (3%) Query: 45 PTTQKVIALTFDDGPDPSETDQILDVLQQYNAKCTFFAIGKRIAAYPDVARRVITEGHEL 104 PTT IALTFDDGPDP T Q+LDVLQ+YN TFF +G+R +PD+ R+ EGH + Sbjct: 76 PTTANRIALTFDDGPDPRFTPQVLDVLQEYNVPATFFVMGRRAERFPDLVTRMAAEGHVI 135 Query: 105 ANHTYNHVYFKKPVSXXXXXXXXXXXXXXXXXVSGRHSSLFRPP-GGMYDETLVDVSNSM 163 NH+Y+H F + G FR P G +Y+E + ++ Sbjct: 136 GNHSYSHPNFVVEDDVALLEQEVLQTEAIIQNLVGYRPRFFRAPYGFLYNELVEKLAE-- 193 Query: 164 GLKPVLWSWHQDTRDWNRPGVYSISSRVIRNARNGDIVLFHDHVHG---QSQTREALKII 220 L + +W DT DW ++ VI +A+ G IVL HD ++QT EAL+ I Sbjct: 194 -LNNTVVAWSIDTLDWRERPAEEVAFSVISSAQPGSIVLMHDGAEADGDRTQTIEALRQI 252 Query: 221 LPELQKRGFRFVTVSELI 238 +P LQ++GF FVTVSELI Sbjct: 253 IPTLQEQGFEFVTVSELI 270 >alr1793 [G] COG0726 Predicted xylanase/chitin deacetylase Length = 359 Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 13/207 (6%), Positives = 30/207 (14%), Gaps = 7/207 (3%) Query: 37 RGEMIWEVPTT--QKVIALTFDDGPDPSETDQILDVLQQYNAKCTFFAIGKRIAAYPDVA 94 I + + + + A Y + Sbjct: 86 DLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWMKLDTGMHRLGVRPEQAEAFYHRLT 145 Query: 95 RRVITEGHELANHTYNHVYFKKPVSXXXXXXXXXXXXXXXXXVSGRHSSLFRPPGGMYDE 154 + + +P R + Sbjct: 146 QCKNVRQPVNIVSHFARAD--EPKCGATEKQLAIFNTFCEGKPGQRSIAASGGILLWPQS 203 Query: 155 TLVDVSNSMGLKPVLWSW-HQDTRDWNRPGVYSISSRVIRNARNGDIVLFHDHVHGQSQT 213 V + L V D+ V S A G + Sbjct: 204 HFDWVRPGIILYGVSPLEDRSTGADFGCQPVM--SLTSSLIAVREHKAGEPVGYGGTWVS 261 Query: 214 REALKIILPELQKRGFRFVTVSELIRL 240 ++ + + + Sbjct: 262 ERDTRLGVVAMGYGDGYPRAAPSGTPV 288 >SPy1370_2 [G] COG0726 Predicted xylanase/chitin deacetylase Length = 223 Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 71/190 (37%), Positives = 99/190 (52%), Gaps = 9/190 (4%) Query: 48 QKVIALTFDDGPDPSETDQILDVLQQYNAKCTFFAIGKRIAAYPDVARRVITEGHELANH 107 +K++ALTFDDGPDP+ T Q+LD+L +Y AK TFF IG ++ ++ +RV GHE+ANH Sbjct: 39 KKLVALTFDDGPDPTTTPQVLDILAKYQAKGTFFMIGSKVVNNENLTKRVSDAGHEIANH 98 Query: 108 TYNHVYFKKPVSXXXXXXXXXXXXXXXXXVSGRHSSLFRPPGGMYDETLVDVSNSMGLKP 167 T++H +S G+ RPP G + T V S GL Sbjct: 99 TWDHPNLTN-LSVSEIQHQVNMTNQAIEKACGKKPRYLRPPYGATNAT---VQQSSGLTQ 154 Query: 168 VLWSWHQDTRDWNRPGVYSISSRVIRNARNGDIVLFHDHVHGQSQTREALKIILPELQKR 227 +LW+ DTRDW I + V + G +VL HD +H T AL ++ L+ Sbjct: 155 MLWTV--DTRDWENHSTDGIMTNVKNQLQPGGVVLMHD-IH--QTTINALPTVMEYLKAE 209 Query: 228 GFRFVTVSEL 237 G+ VTVSEL Sbjct: 210 GYECVTVSEL 219 >alr1669 [G] COG0726 Predicted xylanase/chitin deacetylase Length = 359 Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 8/199 (4%), Positives = 26/199 (13%), Gaps = 4/199 (2%) Query: 41 IWEVPTTQKVIALTFDDGPDPSETDQILDVLQQYNAKCTFFAIGKRIAAYPDVARRVITE 100 + + T D + I + Sbjct: 25 PASKMVAVVKANAYGHGLLETARTLPDADAFGVARLEEALRLRAGGITKPVLLLEGFFDA 84 Query: 101 GHELANHTYNHVYFK--KPVSXXXXXXXXXXXXXXXXXVSGRHSSLFRPPGGMYDETLVD 158 + + + L P Sbjct: 85 RDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWMKLDTGMHRLGVRPEQAEAFYHRL 144 Query: 159 VSNSMGLKPVLWSWHQDTRDWNRPGVYSISSRVIRNARNGDIVLFHDHVHGQSQTREALK 218 +PV + P + ++ + + + Sbjct: 145 TQCKNVRQPVNIV--SHFARADEPKCGATEKQLAIFNTFCEGKPGQRSIAASGGILLWPQ 202 Query: 219 IILPELQKRGFRFVTVSEL 237 ++ + Sbjct: 203 SHFDWVRPGIILYGVSPLE 221 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.320 0.135 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 16,817,609 Number of extensions: 604562 Number of successful extensions: 14338 Number of sequences better than 1.0e-05: 34 Number of HSP's gapped: 14283 Number of HSP's successfully gapped: 34 Length of query: 254 Length of database: 38,378,431 Length adjustment: 104 Effective length of query: 150 Effective length of database: 26,383,695 Effective search space: 3957554250 Effective search space used: 3957554250 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 114 (48.5 bits)