BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0151.0002.p (254 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BS_ykoY [P] COG0861 Membrane protein TerC, possibly involved in ... 290 2e-78 BH2553 [P] COG0861 Membrane protein TerC, possibly involved in t... 288 6e-78 lin0990 [P] COG0861 Membrane protein TerC, possibly involved in ... 253 2e-67 lin0991 [P] COG0861 Membrane protein TerC, possibly involved in ... 220 2e-57 CAC1415 [P] COG0861 Membrane protein TerC, possibly involved in ... 111 1e-24 >BS_ykoY [P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance Length = 324 Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 154/251 (61%), Positives = 181/251 (72%), Gaps = 14/251 (5%) Query: 1 LLAADNALVLAIMVKHLPDEERKKALFYGLAGAFVFRFGSLFVISYLVDIWQVQAIGAIY 60 +LAADNALV+A+MVKHLP+E+RKKALFYGLAGAFV RFGSLF IS+LV++WQVQAIGAIY Sbjct: 82 ILAADNALVMAVMVKHLPEEKRKKALFYGLAGAFVLRFGSLFAISFLVNVWQVQAIGAIY 141 Query: 61 LLFIAGNHIFRKVLFKKPVXXXXXXXXXXXXVQKKKSSFWFTVLKVEVADIAFAVDSIXX 120 LL+I+ +H+ ++ +FKK + K+S FW TVLKVE+ADIAFAVDSI Sbjct: 142 LLYISASHLLKRYVFKKE----------DTHKETKQSGFWPTVLKVELADIAFAVDSILA 191 Query: 121 XXXXXXXXPPSGMGKIGGLDGGQFLVIFAGGFIGLVIMRFAASFFVKLLHSRPGLEVAAF 180 P + + KIGGLDGGQFLVI AGG IGLVIMRFAAS FVKLL RP LE AAF Sbjct: 192 AVALAVTLPGTSLPKIGGLDGGQFLVILAGGIIGLVIMRFAASMFVKLLKERPSLETAAF 251 Query: 181 FIVGWVGVKLAVITLAHPSLGVLSEDFAHSTWWKATFYVVLVIIAATGWFMSSHKTE--- 237 IVGWVGVKLA+ TLAH + V+SE F HS WK F+ VL IA GWFMS K + Sbjct: 252 VIVGWVGVKLALYTLAHRDIAVVSEHFIHSGTWKLIFWGVLAAIAVCGWFMSGGKKQPEG 311 Query: 238 -ENVGENPVRE 247 +N +N RE Sbjct: 312 AQNEQKNSTRE 322 >BH2553 [P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance Length = 265 Score = 288 bits (736), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 152/254 (59%), Positives = 181/254 (71%), Gaps = 30/254 (11%) Query: 1 LLAADNALVLAIMVKHLPDEERKKALFYGLAGAFVFRFGSLFVISYLVDIWQVQAIGAIY 60 LLAADNALVLA+MVKHLP+E+RKKALFYGLAGAF+FRF SLF IS+L+DIWQ+QAIGA+Y Sbjct: 22 LLAADNALVLAVMVKHLPEEKRKKALFYGLAGAFLFRFASLFAISFLIDIWQLQAIGALY 81 Query: 61 LLFIAGNHIFRKVLFK----------KPVXXXXXXXXXXXXVQKKKSSFWFTVLKVEVAD 110 L+FIA NHI RKV + KPV KK+ FW TVLKVE+AD Sbjct: 82 LMFIAVNHIVRKVWLRGHEEVAAATEKPV---------------KKAGFWTTVLKVEIAD 126 Query: 111 IAFAVDSIXXXXXXXXXXPPSGMGKIGGLDGGQFLVIFAGGFIGLVIMRFAASFFVKLLH 170 IAFAVDSI P + + IGG+DGG F+V+F GGF+G+VIMRFAA+ FV LL Sbjct: 127 IAFAVDSILAAVAIAVSLPKTNLPTIGGMDGGHFIVVFIGGFMGVVIMRFAANLFVTLLQ 186 Query: 171 SRPGLEVAAFFIVGWVGVKLAVITLAHPSLGVLSEDFAHSTWWKATFYVVLVIIAATGWF 230 +PGLE+AAF IVGWVGVKL V TL+HP+L +L E FA S+ WK TFYVVL+ IA GWF Sbjct: 187 KKPGLEIAAFLIVGWVGVKLTVFTLSHPTLAILPEGFAASSAWKITFYVVLIGIAVAGWF 246 Query: 231 MSS-----HKTEEN 239 +S K E+N Sbjct: 247 LSKEVEHVEKQEKN 260 >lin0990 [P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance Length = 255 Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 134/242 (55%), Positives = 170/242 (70%), Gaps = 12/242 (4%) Query: 1 LLAADNALVLAIMVKHLPDEERKKALFYGLAGAFVFRFGSLFVISYLVDIWQVQAIGAIY 60 +LAADNA+V+A+MVKHLPD+++KKALFYGL GAFVFRFG+LF+IS+L ++WQVQA+GA Y Sbjct: 22 ILAADNAVVMAVMVKHLPDKQQKKALFYGLMGAFVFRFGALFLISFLANVWQVQALGAAY 81 Query: 61 LLFIAGNHIFRKVLFKKPVXXXXXXXXXXXXVQKKKSSFWFTVLKVEVADIAFAVDSIXX 120 LL+IA +HI++ K +K S FW TVLKVE+ADIAFA+DS+ Sbjct: 82 LLYIAISHIWKHAKGKD---------GEKEKKEKAGSGFWMTVLKVEIADIAFAIDSMLA 132 Query: 121 XXXXXXXXPPSGMGKIGGLDGGQFLVIFAGGFIGLVIMRFAASFFVKLLHSRPGLEVAAF 180 P +G G IGG+D GQF ++F GG +GL+I+RFAA+ FVKLL S P LE AAF Sbjct: 133 AVALAITLPETGWGHIGGIDTGQFAIMFLGGLVGLIIIRFAATQFVKLLKSYPSLETAAF 192 Query: 181 FIVGWVGVKLAVITLAHPSLGVLSEDFAHSTWWKATFYVVLVIIAATGWFM---SSHKTE 237 IVGWVGVKL + TLAHPSLGV+ F ST WK F+ V+++I GWF+ S KTE Sbjct: 193 LIVGWVGVKLVIYTLAHPSLGVIPHSFPESTLWKLIFWGVMILIILWGWFVSYRSKKKTE 252 Query: 238 EN 239 Sbjct: 253 TT 254 >lin0991 [P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance Length = 255 Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 114/221 (51%), Positives = 155/221 (70%), Gaps = 8/221 (3%) Query: 1 LLAADNALVLAIMVKHLPDEERKKALFYGLAGAFVFRFGSLFVISYLVDIWQVQAIGAIY 60 +L+ADNA+V+A++VK LP ++++KALFYGL GAFVFRF +LF+IS+LV IW++QAIGA+Y Sbjct: 22 ILSADNAVVMAVIVKGLPHDKQRKALFYGLVGAFVFRFVALFLISFLVKIWEIQAIGAVY 81 Query: 61 LLFIAGNHIFRKVLFKKPVXXXXXXXXXXXXVQKKKSSFWFTVLKVEVADIAFAVDSIXX 120 LL++A H++R K+ + K +SFW V +VE+ DIAFA+DS+ Sbjct: 82 LLYLAIKHMWRLKKGKQE--------EVKEASEAKSTSFWGVVARVELTDIAFALDSMLA 133 Query: 121 XXXXXXXXPPSGMGKIGGLDGGQFLVIFAGGFIGLVIMRFAASFFVKLLHSRPGLEVAAF 180 P G IGG++GGQF+V+F GG GLV++RFAA+ VKLL P LE AAF Sbjct: 134 AAALVVTLPDLGNFDIGGMNGGQFIVMFLGGIAGLVVIRFAATQVVKLLERYPTLETAAF 193 Query: 181 FIVGWVGVKLAVITLAHPSLGVLSEDFAHSTWWKATFYVVL 221 IVGWVGVK+AV+TLAHPS+ ++ EDF S WK TF+ V+ Sbjct: 194 LIVGWVGVKMAVLTLAHPSVAIIPEDFPDSAVWKLTFWSVM 234 >CAC1415 [P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance Length = 246 Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 71/201 (35%), Positives = 109/201 (54%), Gaps = 29/201 (14%) Query: 1 LLAADNALVLAIMVKHLPDEERKKALFYGLAGAFVFRFGSLFVISYLVDIWQVQAIGAIY 60 LL++DNA+VLAIMVKHLP +++K+ALFYG+ GA++FRF ++ V +YL+ IW V+ I A+Y Sbjct: 42 LLSSDNAVVLAIMVKHLPKKQQKRALFYGIWGAYIFRFIAIGVGTYLIKIWWVKLIAALY 101 Query: 61 LLFIAGNHIFRKVLFKKPVXXXXXXXXXXXXVQKKKSSFWFTVLKVEVADIAFAVDSIXX 120 LL + +H K + K FW TV VE+ DIAF++DS+ Sbjct: 102 LLKMTYSHFAGK-----------AEDDDVDESKVSKKGFWATVATVELMDIAFSIDSVSA 150 Query: 121 XXXXXXXXPPSGMGKIGGLDGGQFLVIFAGGFIGLVIMRFAASFFVKLLHSRPGLEVAAF 180 + V+F G G++ MR A FV L+ P +E +A+ Sbjct: 151 AFGV----------------SSKVWVLFLGAVFGILAMRGVAQIFVALIEKVPEMESSAY 194 Query: 181 FIVGWVGVK--LAVITLAHPS 199 ++G +G+K L +I + P+ Sbjct: 195 VLIGIIGIKMLLNLINIEIPN 215 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.328 0.143 0.438 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 16,614,707 Number of extensions: 633974 Number of successful extensions: 2150 Number of sequences better than 1.0e-05: 16 Number of HSP's gapped: 2148 Number of HSP's successfully gapped: 17 Length of query: 254 Length of database: 38,378,431 Length adjustment: 104 Effective length of query: 150 Effective length of database: 26,383,695 Effective search space: 3957554250 Effective search space used: 3957554250 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 114 (48.5 bits)