BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0147.0018.p (231 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BS_yvgW [P] COG2217 Cation transport ATPase 268 7e-72 slr0798 [P] COG2217 Cation transport ATPase 241 9e-64 FN0258 [P] COG2217 Cation transport ATPase 219 2e-57 CAC2241 [P] COG2217 Cation transport ATPase 201 1e-51 HP0791 [P] COG2217 Cation transport ATPase 179 5e-45 >BS_yvgW [P] COG2217 Cation transport ATPase Length = 702 Score = 268 bits (684), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 135/226 (59%), Positives = 166/226 (73%) Query: 2 VEGKAVLAGNARLMAREGIASRTPEQNGTVVHIAIDKQYAGYLVIADEVKEDSLQAVQAL 61 V G +LAGN +LM RE I E GT+VH+A+D++YAG ++IADE+KED+ QAV L Sbjct: 474 VNGTEILAGNKKLMEREQIEDVPDENAGTIVHVAVDQRYAGAIIIADEIKEDAAQAVADL 533 Query: 62 GRLGIHRTVMLTGDASPVAEAVGQQLGIEEIHAELLPQHKVEAIEKLEREKSQREKIIFV 121 LGI +T MLTGD+ EAVG+QLGI E++AELLPQ KV +E LE + EK+IFV Sbjct: 534 KSLGIKQTAMLTGDSKQTGEAVGKQLGIGEVYAELLPQDKVAQVEALEAKLLPSEKLIFV 593 Query: 122 GDGINDTPVLARADVGIAMGGLGSDAAIEAADIVIMTDEPSKIATAVSIAKRTRTIVWQN 181 GDGINDTPVLARAD+G+AMGGLGSDAA+EAADIV+MTD+PSKIA A+ IAKRTR IVWQN Sbjct: 594 GDGINDTPVLARADIGVAMGGLGSDAAVEAADIVLMTDQPSKIAEAIRIAKRTRRIVWQN 653 Query: 182 XXXXXXXXXXXXXXXXXXXXTMWEAVFSDVGVTVLAVLNSVRALQV 227 TMWEAVFSDVGVT+LAV N++R +++ Sbjct: 654 IGFALGVKAIFLILGAFGIATMWEAVFSDVGVTLLAVANAMRVMRL 699 >slr0798 [P] COG2217 Cation transport ATPase Length = 721 Score = 241 bits (614), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 120/223 (53%), Positives = 164/223 (73%), Gaps = 1/223 (0%) Query: 1 MVEGKAVLAGNARLMAREGIASRTPEQNGTVVHIAIDKQYAGYLVIADEVKEDSLQAVQA 60 +V+ + V+AGN RL+ RE I T + GTVVH+A+D +Y GY++IADE+KED++QA++ Sbjct: 497 VVQNQVVIAGNDRLLHREKIDHDTCDVAGTVVHLAVDGRYGGYILIADEIKEDAVQAIRD 556 Query: 61 LGRLGIHRTVMLTGDASPVAEAVGQQLGIEEIHAELLPQHKVEAIEKLEREKSQREKIIF 120 L R+G+ +TVMLTGD+ VA++V QQ+G++ AELLP+ KV+ IE+L + S + K+ F Sbjct: 557 LKRMGVEKTVMLTGDSEIVAQSVAQQIGLDAFVAELLPEEKVDEIEQL-LDPSGKAKLAF 615 Query: 121 VGDGINDTPVLARADVGIAMGGLGSDAAIEAADIVIMTDEPSKIATAVSIAKRTRTIVWQ 180 VGDGIND PV+ARADVGIAMGGLGSDAAIE AD+V+MTD PSK+A A+ +A++TR IV Q Sbjct: 616 VGDGINDAPVIARADVGIAMGGLGSDAAIETADVVLMTDAPSKVAEAIHVARKTRQIVVQ 675 Query: 181 NXXXXXXXXXXXXXXXXXXXXTMWEAVFSDVGVTVLAVLNSVR 223 N T+WEAVF+DVGV +LA+LN+ R Sbjct: 676 NIVLALGIKALFIALGTIGLATLWEAVFADVGVALLAILNATR 718 >FN0258 [P] COG2217 Cation transport ATPase Length = 614 Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 107/227 (47%), Positives = 153/227 (67%), Gaps = 2/227 (0%) Query: 1 MVEGKAVLAGNARLMAREGIASRTPEQNGTVVHIAIDKQYAGYLVIADEVKEDSLQAVQA 60 +V +L GN +L++ + GT++++ I ++ GY+VI+DE+K+D+ +A++ Sbjct: 387 IVNNMKILVGNKKLVSVPN--DLIIDDIGTILYVEIANKFTGYIVISDEIKKDAEKAIKG 444 Query: 61 LGRLGIHRTVMLTGDASPVAEAVGQQLGIEEIHAELLPQHKVEAIEKLEREKSQREKIIF 120 L +GI +++MLTGD VA+ VG+ LG++EI++ LLPQ KV E++ + K+ + ++F Sbjct: 445 LKDIGIKKSIMLTGDVEKVAKKVGEDLGLDEIYSNLLPQDKVSKFEEIIKNKNSKGNVVF 504 Query: 121 VGDGINDTPVLARADVGIAMGGLGSDAAIEAADIVIMTDEPSKIATAVSIAKRTRTIVWQ 180 VGDGIND PVLARADVGIAMG +GSDAAIEAAD+VIMTDEPSKI TA+ +K+T I Q Sbjct: 505 VGDGINDAPVLARADVGIAMGAMGSDAAIEAADVVIMTDEPSKIVTAIKSSKKTMKIAMQ 564 Query: 181 NXXXXXXXXXXXXXXXXXXXXTMWEAVFSDVGVTVLAVLNSVRALQV 227 N MW AVF+D GVT+LAVLNS RAL++ Sbjct: 565 NIILAFGIKIIALILSALGIADMWMAVFADTGVTILAVLNSFRALKI 611 >CAC2241 [P] COG2217 Cation transport ATPase Length = 699 Score = 201 bits (510), Expect = 1e-51, Method: Composition-based stats. Identities = 110/228 (48%), Positives = 151/228 (66%), Gaps = 5/228 (2%) Query: 2 VEGKAVLAGNARLMAREGIASRTP---EQNGTVVHIAIDKQYAGYLVIADEVKEDSLQAV 58 V GK V GN +LM +E I + GTV++++ + + G ++I+D++KED+++A+ Sbjct: 473 VNGKLVFVGNEKLMLKENIDVKEEAFRNDIGTVIYVSCEGSFVGSILISDKLKEDTIKAI 532 Query: 59 QALGRLGIHRTVMLTGDASPVAEAVGQQLGIEEIHAELLPQHKVEAIEKLEREKSQREKI 118 +AL R+ I + +M TGD A V Q++GI+++ ELLPQ KV +EK+ E + ++ Sbjct: 533 EALKRINI-KPIMFTGDNKKAALKVSQKIGIDDVKYELLPQDKVYNMEKI-FEGNMSGRV 590 Query: 119 IFVGDGINDTPVLARADVGIAMGGLGSDAAIEAADIVIMTDEPSKIATAVSIAKRTRTIV 178 FVGDGIND PVLARADVGI+MG GSDAA+EA+D+VIMTDEP KI AV IAK TR+IV Sbjct: 591 AFVGDGINDAPVLARADVGISMGSFGSDAAVEASDVVIMTDEPYKIYEAVLIAKSTRSIV 650 Query: 179 WQNXXXXXXXXXXXXXXXXXXXXTMWEAVFSDVGVTVLAVLNSVRALQ 226 WQN MWEAVF+DVGV +LAVLNS+R L+ Sbjct: 651 WQNIVLALGVKAIVLLLTILGISNMWEAVFADVGVALLAVLNSLRILK 698 >HP0791 [P] COG2217 Cation transport ATPase Length = 686 Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 91/221 (41%), Positives = 138/221 (62%), Gaps = 6/221 (2%) Query: 7 VLAGNARLMAREGIASRTPEQNGTVVHIAIDKQYAGYLVIADEVKEDSLQAVQALGRLGI 66 ++AGN +++ + IA ++NGT+VH+A ++ Y GY+VI+DE+K+D+++ ++ L GI Sbjct: 470 IIAGNEKMLDQFHIAHSPSKENGTIVHVAFNQTYVGYIVISDEIKDDAIECLRDLKVQGI 529 Query: 67 HRTVMLTGDASPVAEAVGQQLGIEEIHAELLPQHKVEAIEKL-EREKSQREKIIFVGDGI 125 +L+GD E++ Q LG E HA LLP+ K + ER K+ IFVGDGI Sbjct: 530 ENFCILSGDRKSATESIAQTLGC-EYHASLLPEEKTSVFKTFKERYKAPA---IFVGDGI 585 Query: 126 NDTPVLARADVGIAMGGLGSDAAIEAADIVIMTDEPSKIATAVSIAKRTRTIVWQNXXXX 185 ND P LA ADVGI MG GS+ + ++ADIVI D + + ++IAK+T++I+WQN Sbjct: 586 NDAPTLASADVGIGMGK-GSELSKQSADIVITNDSLNSLVKVLAIAKKTKSIIWQNILFA 644 Query: 186 XXXXXXXXXXXXXXXXTMWEAVFSDVGVTVLAVLNSVRALQ 226 ++WEAVF DVGVT+LA+ NS+RA++ Sbjct: 645 LGIKAVFIVLGLMGVASLWEAVFGDVGVTLLALANSMRAMR 685 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.316 0.132 0.357 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 15,028,192 Number of extensions: 555696 Number of successful extensions: 2108 Number of sequences better than 1.0e-05: 185 Number of HSP's gapped: 1757 Number of HSP's successfully gapped: 185 Length of query: 231 Length of database: 38,378,431 Length adjustment: 103 Effective length of query: 128 Effective length of database: 26,499,029 Effective search space: 3391875712 Effective search space used: 3391875712 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 114 (48.5 bits)