BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0147.0009.p (258 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGc1505 [P] COG4208 ABC-type sulfate transport system, permease ... 329 2e-90 BMEI1839 [P] COG4208 ABC-type sulfate transport system, permease... 306 1e-83 AGl2654 [P] COG4208 ABC-type sulfate transport system, permease ... 294 1e-79 BMEI0675 [P] COG4208 ABC-type sulfate transport system, permease... 275 7e-74 BMEI0674 [O] COG0555 ABC-type sulfate transport system, permease... 155 8e-38 >AGc1505 [P] COG4208 ABC-type sulfate transport system, permease component Length = 370 Score = 329 bits (844), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 19/251 (7%), Positives = 37/251 (14%) Query: 2 LVAAAGLVLFWLIALPLIVVLTEALKRGWDVFLAALTDPDAASALRLTLLVAAITVPLNT 61 A A ++ A P L S + +VP Sbjct: 27 FPAMATILSHLRNAKPYRTGALGITAAELVSLLELAERGQVNSPEQARQFFETNSVPFRI 86 Query: 62 VFGVMAAWAVTKFRFRGKGFLITLIDLPFAVSPVIGGLIFVLVFGSNGWFGSWLSAHDIK 121 + VT F T D+ + + + A Sbjct: 87 SPAQGKSGFVTAFYEPELEVSATPDDVWRYPIYRRPPELVDIDNDNRPDGFDPSYAFGKA 146 Query: 122 IVFALPGIMLATLFVTFPFVARELIPLMEDQGTQEEEAAITLGAHGWQIFWRVTLPNIKW 181 + R L + A + Sbjct: 147 DEEGISYFPDRRAIDEGCLRGRGLEIAWARSKVDLFFVHVQGAARLVFPDGAIKRITYAA 206 Query: 182 GLLYGIILCNARAMGEFGAVSVVSGHIRGETNTLPLHVEILYNEYQXXXXXXXXXXXXXX 241 + + E+ + Sbjct: 207 KAGHVFSPIGRLLLDRGELDPKTISMQTIRQWLADHPDEVDGVLWHNRSYIFFREADVAG 266 Query: 242 XXXTMIVKSWL 252 I + + Sbjct: 267 LDMGPIAAAKV 277 >BMEI1839 [P] COG4208 ABC-type sulfate transport system, permease component Length = 245 Score = 306 bits (785), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 147/204 (72%), Positives = 174/204 (85%) Query: 24 EALKRGWDVFLAALTDPDAASALRLTLLVAAITVPLNTVFGVMAAWAVTKFRFRGKGFLI 83 EA ++G ++AAL +PDA +A++LTL VAAI VPLN VFG+ AAWA+ KF F+GK L Sbjct: 2 EAFRKGMSEYIAALVEPDAWAAIKLTLTVAAIAVPLNVVFGIAAAWAIAKFEFKGKALLT 61 Query: 84 TLIDLPFAVSPVIGGLIFVLVFGSNGWFGSWLSAHDIKIVFALPGIMLATLFVTFPFVAR 143 TLIDLPF+VSPVI GL+FVL+F S+ G WLS H I+I+FA+PGI+LAT+FVTFPFVAR Sbjct: 62 TLIDLPFSVSPVISGLVFVLLFSSHSLLGPWLSRHGIEILFAVPGIVLATVFVTFPFVAR 121 Query: 144 ELIPLMEDQGTQEEEAAITLGAHGWQIFWRVTLPNIKWGLLYGIILCNARAMGEFGAVSV 203 ELIPLM++QGT +EEAAI+LGA GWQ F VTLPNIKWGLLYG++LCNARAMGEFGAVSV Sbjct: 122 ELIPLMQEQGTGDEEAAISLGASGWQAFRYVTLPNIKWGLLYGVLLCNARAMGEFGAVSV 181 Query: 204 VSGHIRGETNTLPLHVEILYNEYQ 227 VSGHIRG TNT+PLHVEILYNEY Sbjct: 182 VSGHIRGLTNTMPLHVEILYNEYN 205 >AGl2654 [P] COG4208 ABC-type sulfate transport system, permease component Length = 154 Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 0/245 (0%), Positives = 0/245 (0%) Query: 13 LIALPLIVVLTEALKRGWDVFLAALTDPDAASALRLTLLVAAITVPLNTVFGVMAAWAVT 72 + L++ + + AL + L+ + + Sbjct: 34 IREFFLLLNNRQIDALPQLLAPGALIVDGKGRGDTNASPRERLNDTLSFLRSPVVVLRSE 93 Query: 73 KFRFRGKGFLITLIDLPFAVSPVIGGLIFVLVFGSNGWFGSWLSAHDIKIVFALPGIMLA 132 + +++ + +I + + + + Sbjct: 94 PLFEGCRVTVVSPSGSDLRYYKLNFQMISGKIVLLKILPAKPDAYDFPTSAQVAIVNVSS 153 Query: 133 TLFVTFPFVARELIPLMEDQGTQEEEAAITLGAHGWQIFWRVTLPNIKWGLLYGIILCNA 192 Sbjct: 154 213 Query: 193 RAMGEFGAVSVVSGHIRGETNTLPLHVEILYNEYQXXXXXXXXXXXXXXXXXTMIVKSWL 252 Sbjct: 214 273 Query: 253 TRKNA 257 Sbjct: 274 278 >BMEI0675 [P] COG4208 ABC-type sulfate transport system, permease component Length = 276 Score = 275 bits (702), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 135/252 (53%), Positives = 173/252 (68%), Gaps = 1/252 (0%) Query: 5 AAGLVLFWLIALPLIVVLTEALKRGWDVFLAALTDPDAASALRLTLLVAAITVPLNTVFG 64 AAGL + I PL V+ + A +G VF + + PD A+ LT+L A + VP+N FG Sbjct: 24 AAGLSVL-CIGAPLAVIFSYAFSKGIHVFFSEILKPDTLHAVWLTVLTAIVVVPINMAFG 82 Query: 65 VMAAWAVTKFRFRGKGFLITLIDLPFAVSPVIGGLIFVLVFGSNGWFGSWLSAHDIKIVF 124 V AW VTKFRF G+ LIT +++PF+VSP++ G+ ++ ++GS G G +L AHDIKI+F Sbjct: 83 VCVAWLVTKFRFPGRRLLITFVEIPFSVSPIVAGVTYLFLYGSQGLLGPFLEAHDIKIMF 142 Query: 125 ALPGIMLATLFVTFPFVARELIPLMEDQGTQEEEAAITLGAHGWQIFWRVTLPNIKWGLL 184 +P I L +LFVT PFVARELIPLME QG+ EEEAA+TLGA WQ F+ VTLPNIKW LL Sbjct: 143 TVPAIFLVSLFVTSPFVARELIPLMEVQGSDEEEAALTLGASAWQTFFYVTLPNIKWALL 202 Query: 185 YGIILCNARAMGEFGAVSVVSGHIRGETNTLPLHVEILYNEYQXXXXXXXXXXXXXXXXX 244 YG +LCNAR MGEFGA SVVSG IRG+TNTLPL VE+L+N+Y Sbjct: 203 YGAVLCNARVMGEFGATSVVSGAIRGKTNTLPLQVELLFNDYNVAGAFAAASTLALIALV 262 Query: 245 TMIVKSWLTRKN 256 T+++K +L RK Sbjct: 263 TLVLKVFLERKQ 274 >BMEI0674 [O] COG0555 ABC-type sulfate transport system, permease component Length = 298 Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 84/215 (39%), Positives = 123/215 (57%) Query: 13 LIALPLIVVLTEALKRGWDVFLAALTDPDAASALRLTLLVAAITVPLNTVFGVMAAWAVT 72 ++ALPL+ ++ + GW F +T A + R+T+ AA+ LN +FG++ AW +T Sbjct: 49 IVALPLLAMILKTASLGWGDFWNIVTSERALATYRITVSAAAVATILNGLFGLLLAWVLT 108 Query: 73 KFRFRGKGFLITLIDLPFAVSPVIGGLIFVLVFGSNGWFGSWLSAHDIKIVFALPGIMLA 132 ++ F GK + +DLPFA+ I GL V +F NGWFG L IK+ +A GIM+A Sbjct: 109 RYDFPGKRLIDAAVDLPFALPTAIAGLALVTLFAQNGWFGRVLEPLGIKVAYAPLGIMIA 168 Query: 133 TLFVTFPFVARELIPLMEDQGTQEEEAAITLGAHGWQIFWRVTLPNIKWGLLYGIILCNA 192 F + PFV R + P++ED EEAA +LGA WQ F +T P I L G L A Sbjct: 169 MFFTSIPFVVRTVQPVLEDMSADVEEAARSLGATSWQTFTHITWPTIFPAFLAGASLSFA 228 Query: 193 RAMGEFGAVSVVSGHIRGETNTLPLHVEILYNEYQ 227 R++GEFG++ +SG++ +T L V I +EY Sbjct: 229 RSLGEFGSIVFISGNLPFQTEVTALLVFIRLDEYD 263 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.328 0.142 0.450 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 17,640,174 Number of extensions: 711659 Number of successful extensions: 2791 Number of sequences better than 1.0e-05: 142 Number of HSP's gapped: 2787 Number of HSP's successfully gapped: 144 Length of query: 258 Length of database: 38,378,431 Length adjustment: 104 Effective length of query: 154 Effective length of database: 26,383,695 Effective search space: 4063089030 Effective search space used: 4063089030 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 115 (48.9 bits)