BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0137.0013.p
         (169 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BH2788 [I] COG0511 Biotin carboxyl carrier protein                    125   3e-29
BS_accB [I] COG0511 Biotin carboxyl carrier protein                   122   2e-28
SA1358 [I] COG0511 Biotin carboxyl carrier protein                    107   7e-24
RSc2786 [I] COG0511 Biotin carboxyl carrier protein                   103   1e-22
aq_1363 [I] COG0511 Biotin carboxyl carrier protein                    99   2e-21

>BH2788 [I] COG0511 Biotin carboxyl carrier protein
          Length = 169

 Score =  125 bits (314), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 57/79 (72%), Positives = 69/79 (87%)

Query: 91  LHKIVSPMVGTFYSAASPETPSFVNVGDRVSEKSTVCIIEAMKLMNELEAEVRGEIVSVL 150
           LHKI SPMVGTFY A SP++  +V VGD VSE + VCI+EAMKLMNE+EAEV+G+IV VL
Sbjct: 90  LHKITSPMVGTFYVAPSPDSDPYVKVGDNVSENTVVCIVEAMKLMNEIEAEVKGKIVEVL 149

Query: 151 AENGQLVEYGQPLFLVKPE 169
           AENG+LVEYGQPLF+V+P+
Sbjct: 150 AENGELVEYGQPLFVVEPQ 168


>BS_accB [I] COG0511 Biotin carboxyl carrier protein
          Length = 159

 Score =  122 bits (307), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 56/79 (70%), Positives = 66/79 (83%)

Query: 91  LHKIVSPMVGTFYSAASPETPSFVNVGDRVSEKSTVCIIEAMKLMNELEAEVRGEIVSVL 150
           LHKI SPMVGTFY+++SPE   +V  G +V+E + VCI+EAMKL NE+EAEV+GEIV VL
Sbjct: 81  LHKITSPMVGTFYASSSPEAGPYVTAGSKVNENTVVCIVEAMKLFNEIEAEVKGEIVEVL 140

Query: 151 AENGQLVEYGQPLFLVKPE 169
            ENGQLVEYGQPLFLVK E
Sbjct: 141 VENGQLVEYGQPLFLVKAE 159


>SA1358 [I] COG0511 Biotin carboxyl carrier protein
          Length = 154

 Score =  107 bits (268), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 49/82 (59%), Positives = 64/82 (78%), Gaps = 1/82 (1%)

Query: 87  PEGALHKIVS-PMVGTFYSAASPETPSFVNVGDRVSEKSTVCIIEAMKLMNELEAEVRGE 145
           P    HK ++ PMVGTFY + SP+  ++V VGD VS ++TVCI+EAMKL NE++AE+ GE
Sbjct: 73  PTSDNHKTINAPMVGTFYKSPSPDEEAYVQVGDTVSNETTVCILEAMKLFNEIQAEISGE 132

Query: 146 IVSVLAENGQLVEYGQPLFLVK 167
           IV +L E+GQ+VEYGQPLF VK
Sbjct: 133 IVEILVEDGQMVEYGQPLFKVK 154


>RSc2786 [I] COG0511 Biotin carboxyl carrier protein
          Length = 155

 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 48/75 (64%), Positives = 57/75 (76%)

Query: 92  HKIVSPMVGTFYSAASPETPSFVNVGDRVSEKSTVCIIEAMKLMNELEAEVRGEIVSVLA 151
           H + SPMVGTFY + SP   +FVNVGD V E  T+CIIEAMKL+NE+EA+  G I  VL 
Sbjct: 80  HIVTSPMVGTFYRSPSPGAAAFVNVGDTVKEGQTLCIIEAMKLLNEIEADKAGVIKDVLV 139

Query: 152 ENGQLVEYGQPLFLV 166
           ENGQ VEYGQPLF++
Sbjct: 140 ENGQAVEYGQPLFVI 154


>aq_1363 [I] COG0511 Biotin carboxyl carrier protein
          Length = 355

 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 4/79 (5%), Positives = 13/79 (16%)

Query: 88  EGALHKIVSPMVGTFYSAASPETPSFVNVGDRVSEKSTVCIIEAMKLMNELEAEVRGEIV 147
                  ++         +     +           + + I +      +   E     +
Sbjct: 72  SCNTCHNLARYGVDNLPTSIGHRWAIGPRNAPTVYNAAIHIAQFWDGRAKDVEEQALGPI 131

Query: 148 SVLAENGQLVEYGQPLFLV 166
               E     E        
Sbjct: 132 VNPIEMANTEENAVKTLKS 150


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.312    0.130    0.354 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 9,195,951
Number of extensions: 323860
Number of successful extensions: 2013
Number of sequences better than 1.0e-05: 20
Number of HSP's gapped: 2019
Number of HSP's successfully gapped: 20
Length of query: 169
Length of database: 38,378,431
Length adjustment: 99
Effective length of query: 70
Effective length of database: 26,960,365
Effective search space: 1887225550
Effective search space used: 1887225550
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 112 (47.8 bits)