BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0128.0031.p (391 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGpA704 [E] COG0006 Xaa-Pro aminopeptidase 308 1e-83 BH1739 [E] COG0006 Xaa-Pro aminopeptidase 209 4e-54 AGl2481 [I] COG4799 Acetyl-CoA carboxylase, carboxyltransferase ... 191 3e-48 AGl248 [E] COG0006 Xaa-Pro aminopeptidase 191 3e-48 AGl2480_2 [R] COG3800 Predicted transcriptional regulator 191 3e-48 >AGpA704 [E] COG0006 Xaa-Pro aminopeptidase Length = 373 Score = 308 bits (788), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 0/378 (0%), Positives = 0/378 (0%), Gaps = 4/378 (1%) Query: 8 FSRNEFHSRLHNVQSELGLKGLNGMLIHTPENIFYLTGYQSPGYYMYQCLVVPVSGDPVL 67 + + +++ + M + G + + Sbjct: 15 SITRKARASSASLRKCSERREEKKMTRTIRWGVLGCAGIAAKAVIPAIQSSRLGRVVAIA 74 Query: 68 VLRRGELSNVQTYSWLPESQVRTYDDTNDPVALTADTVRELSIAPGALGLETGSWFLPVR 127 + + + S + L Sbjct: 75 SRDAAKAKEMTARFGIARSYG--SYEDLLADPEIDAIYNPLPNHLHVPMTIKALEQGKPV 132 Query: 128 SYQKLEKMLGGFKLTDAQGTIEAFRVIKSPAEIAYIREACTVADRSMQAGLDAIRAGVNE 187 +K + T + + ++ + Sbjct: 133 LCEKPIALDA--AQARELATAQKAASLPVAEAFMVRHHPQWKKAHALITEGRLGEVRAIQ 190 Query: 188 DEXXXXXXXXXXXXGGEYLGMEPFISSGFRSGNMHAAWGHKVIGDGETLLLEVAGARNRY 247 +G G + N L+ Sbjct: 191 TIFSYYLDDPGNVRNQVDIGGGGLFDVGCYAINTARFLFDAEPLRAIALMERDPVFGTDR 250 Query: 248 HGALMRAAYTGTPTDEIKRVTGVCIASLNAALEVIRPGVTAGEVDEACRGTIERAGLYEQ 307 + + A G + R + A T+ Sbjct: 251 LTSGLLAFPEGKQLAFTCSTQLSLTQKVTVLGTRGRLEIPIPFNAPADEPTVLIFDDGRD 310 Query: 308 FRKRTGYSIGVAFAPDWGEGHIMSLQRDDSRVLLPGMVFHIPPALRVPNHYGVGFSETIL 367 I + + E + S L + + + + Sbjct: 311 LAGGGREEIMIGPVDQYREQADAFAEAVLSGKPLETDLGDAIANTKAIDALFRSAASGRW 370 Query: 368 VTETGCEVLTKLPRELTL 385 Sbjct: 371 388 >BH1739 [E] COG0006 Xaa-Pro aminopeptidase Length = 406 Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 120/388 (30%), Positives = 202/388 (52%), Gaps = 15/388 (3%) Query: 7 IFSRNEFHSRLHNVQSELGLKGLNGMLIHTPENIFYLTGYQSPGYYMYQCLVVPVSG-DP 65 +FS E+ RL+ + + +G++ +L+ P N++YL+GY + +Y++Q LVV + P Sbjct: 1 MFSLMEYRYRLNETKKRMMDEGIDVLLVSNPSNMYYLSGYSAWSFYVHQLLVVTLDDPQP 60 Query: 66 VLVLRRGELSNVQTYSWLPESQVRTYDD------TNDPVALTADTVRELSIAPGALGLET 119 + + R + S+V +WL E QV Y D T P+ + ++E+ +G+E Sbjct: 61 LWIGREMDASSVVKTTWLDEQQVIPYPDHYVQSETRHPMDFVTNILKEIGQGNRTIGVEM 120 Query: 120 GSWFLPVRSYQKLEKMLGGFKLTDAQGTIEAFRVIKSPAEIAYIREACTVADRSMQAGLD 179 + + YQ+L++ L +A I R+IKS EI +R+A +A+ +M+A D Sbjct: 121 DAHYFTGLCYQRLQQGLTNGTFKNATTLINWVRLIKSDQEIQVMRKAAKIAENAMKAAYD 180 Query: 180 AIRAGVNEDEXXXXXXXX----XXXXGGEYLGMEPFISSGFRSGNMHAAWGHKVIGDGET 235 + GV E + GG+Y + P + +G + H W + +G+ Sbjct: 181 TVNVGVRECDVAAAISHAQIKGTAEFGGDYPSIVPMLPTGENTSCPHLTWTDRTYQEGDY 240 Query: 236 LLLEVAGARNRYHGALMRAAYTGTPTDEIKRVTGVCIASLNAALEVIRPGVTAGEVDEAC 295 L +E+AG RYH + R G + +K + V I ++ L++IRPGV A EV Sbjct: 241 LTVEIAGCYKRYHVPIARTVSLGVAPEHVKELAKVVIEGIHETLQMIRPGVAAEEVAATW 300 Query: 296 RGTIERAGLYEQFRKRTGYSIGVAFAPDWGEGHIMSLQRDDSRVLLPGMVFHIPPALRVP 355 +I + G + R GYSIG++F PDWGE H +SL++ D +L P M FH+ P + Sbjct: 301 NQSISKHGF--EKNSRLGYSIGLSFPPDWGE-HTVSLRQGDRTLLKPNMTFHLMPGIWYE 357 Query: 356 NHYGVGFSETILVTETGCEVLTKLPREL 383 + YGV +E+I +T+ G E+LT + RE+ Sbjct: 358 D-YGVEITESIRITDDGVELLTNVSREI 384 >AGl2481 [I] COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) Length = 320 Score = 191 bits (484), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 0/391 (0%), Positives = 0/391 (0%), Gaps = 14/391 (3%) Query: 3 STSLIFSRNEFHSRLHNVQSELGLKGLNGMLIHTPENIFYLTGYQSPGYYMYQCLVVPVS 62 + + S + + + + T E VV Sbjct: 2 LRLSVGKKAWHKSIMKSEHTIEATIARHAPHDGTFETQLPGLKLIRCSETTLPMPVVYEP 61 Query: 63 GDPVLVLRRGELSNVQTYSWLPESQVRTYDD------TNDPVALTADTVRELSIAPGALG 116 ++ R + QT S + + + Sbjct: 62 TLCLVAQGRKQAVLGQTSFVYDPSSYLVASVDLPVMGSVIEASKDKPYLSMQLDLDTVEL 121 Query: 117 LETGSWFLPVRSYQKLEKMLGGFKLTDAQGTIEAFRVIKSPAEIAYIREACTVADRSMQA 176 + + + + D A R++ I +A R + Sbjct: 122 ADLAIRYPSEQHAPINGPIGLLLNKVDEGIIDAASRLLALLDTPRDIDALSPLAKREILY 181 Query: 177 GLDAIRAGVNE----DEXXXXXXXXXXXXGGEYLGMEPFISSGFRSGNMHAAWGHKVIGD 232 L G E + Sbjct: 182 RLITGVGGAALRQIVQAGAHVNQIARSIVWIRKHFRETCSVEAGAEVAGMSRSTFHAHFK 241 Query: 233 GETLLLEVAGARNRYHGALMRAAYTGTPTDEIKRVTGVCIASLNAALEVIRPGVTAGEVD 292 T + + R + + + E R + Sbjct: 242 AVTNMSPLEFRTQLRLQEARRLMLSEGLDAATAGFQVGYASPSQFSREYGRVFGMSPAKH 301 Query: 293 EACRGTIERAGLYEQFRKRTGYSIGVAFAPDWGEGHIMSLQRDDSRVLLPGMVFHIPPAL 352 + + Sbjct: 302 ANALRQSPKQWIEPL--- 358 Query: 353 RVPNHYGVGFSETILVTETGCEVLTKLPREL 383 Sbjct: 359 - 388 >AGl248 [E] COG0006 Xaa-Pro aminopeptidase Length = 320 Score = 191 bits (484), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 0/391 (0%), Positives = 0/391 (0%), Gaps = 14/391 (3%) Query: 3 STSLIFSRNEFHSRLHNVQSELGLKGLNGMLIHTPENIFYLTGYQSPGYYMYQCLVVPVS 62 + + S + + + + T E VV Sbjct: 2 LRLSVGKKAWHKSIMKSEHTIEATIARHAPHDGTFETQLPGLKLIRCSETTLPMPVVYEP 61 Query: 63 GDPVLVLRRGELSNVQTYSWLPESQVRTYDD------TNDPVALTADTVRELSIAPGALG 116 ++ R + QT S + + + Sbjct: 62 TLCLVAQGRKQAVLGQTSFVYDPSSYLVASVDLPVMGSVIEASKDKPYLSMQLDLDTVEL 121 Query: 117 LETGSWFLPVRSYQKLEKMLGGFKLTDAQGTIEAFRVIKSPAEIAYIREACTVADRSMQA 176 + + + + D A R++ I +A R + Sbjct: 122 ADLAIRYPSEQHAPINGPIGLLLNKVDEGIIDAASRLLALLDTPRDIDALSPLAKREILY 181 Query: 177 GLDAIRAGVNE----DEXXXXXXXXXXXXGGEYLGMEPFISSGFRSGNMHAAWGHKVIGD 232 L G E + Sbjct: 182 RLITGVGGAALRQIVQAGAHVNQIARSIVWIRKHFRETCSVEAGAEVAGMSRSTFHAHFK 241 Query: 233 GETLLLEVAGARNRYHGALMRAAYTGTPTDEIKRVTGVCIASLNAALEVIRPGVTAGEVD 292 T + + R + + + E R + Sbjct: 242 AVTNMSPLEFRTQLRLQEARRLMLSEGLDAATAGFQVGYASPSQFSREYGRVFGMSPAKH 301 Query: 293 EACRGTIERAGLYEQFRKRTGYSIGVAFAPDWGEGHIMSLQRDDSRVLLPGMVFHIPPAL 352 + + Sbjct: 302 ANALRQSPKQWIEPL--- 358 Query: 353 RVPNHYGVGFSETILVTETGCEVLTKLPREL 383 Sbjct: 359 - 388 >AGl2480_2 [R] COG3800 Predicted transcriptional regulator Length = 320 Score = 191 bits (484), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 0/391 (0%), Positives = 0/391 (0%), Gaps = 14/391 (3%) Query: 3 STSLIFSRNEFHSRLHNVQSELGLKGLNGMLIHTPENIFYLTGYQSPGYYMYQCLVVPVS 62 + + S + + + + T E VV Sbjct: 2 LRLSVGKKAWHKSIMKSEHTIEATIARHAPHDGTFETQLPGLKLIRCSETTLPMPVVYEP 61 Query: 63 GDPVLVLRRGELSNVQTYSWLPESQVRTYDD------TNDPVALTADTVRELSIAPGALG 116 ++ R + QT S + + + Sbjct: 62 TLCLVAQGRKQAVLGQTSFVYDPSSYLVASVDLPVMGSVIEASKDKPYLSMQLDLDTVEL 121 Query: 117 LETGSWFLPVRSYQKLEKMLGGFKLTDAQGTIEAFRVIKSPAEIAYIREACTVADRSMQA 176 + + + + D A R++ I +A R + Sbjct: 122 ADLAIRYPSEQHAPINGPIGLLLNKVDEGIIDAASRLLALLDTPRDIDALSPLAKREILY 181 Query: 177 GLDAIRAGVNE----DEXXXXXXXXXXXXGGEYLGMEPFISSGFRSGNMHAAWGHKVIGD 232 L G E + Sbjct: 182 RLITGVGGAALRQIVQAGAHVNQIARSIVWIRKHFRETCSVEAGAEVAGMSRSTFHAHFK 241 Query: 233 GETLLLEVAGARNRYHGALMRAAYTGTPTDEIKRVTGVCIASLNAALEVIRPGVTAGEVD 292 T + + R + + + E R + Sbjct: 242 AVTNMSPLEFRTQLRLQEARRLMLSEGLDAATAGFQVGYASPSQFSREYGRVFGMSPAKH 301 Query: 293 EACRGTIERAGLYEQFRKRTGYSIGVAFAPDWGEGHIMSLQRDDSRVLLPGMVFHIPPAL 352 + + Sbjct: 302 ANALRQSPKQWIEPL--- 358 Query: 353 RVPNHYGVGFSETILVTETGCEVLTKLPREL 383 Sbjct: 359 - 388 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.319 0.137 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 29,625,252 Number of extensions: 1283839 Number of successful extensions: 2136 Number of sequences better than 1.0e-05: 84 Number of HSP's gapped: 1987 Number of HSP's successfully gapped: 84 Length of query: 391 Length of database: 38,378,431 Length adjustment: 108 Effective length of query: 283 Effective length of database: 25,922,359 Effective search space: 7336027597 Effective search space used: 7336027597 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 117 (49.7 bits)