BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0115.0003.p
         (257 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Cgl2766 [R] COG3910 Predicted ATPase                                  155   4e-38
Cgl2765 [R] COG3910 Predicted ATPase                                  146   3e-35

>Cgl2766 [R] COG3910 Predicted ATPase
          Length = 240

 Score =  155 bits (393), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 121/212 (57%), Gaps = 19/212 (8%)

Query: 40  LDFQNRVTFLVGENGTGKSTLLEGIAAAWGFNPEGGTLNFSFNTRSS-HSSLHEYLRLTK 98
           L+F+  +T + GENG GKSTL+E +A     NP GG+ + +F       SSLH+ L+L  
Sbjct: 33  LEFRAPITVITGENGVGKSTLVEALAVGMRLNPSGGSRHANFGREGDIVSSLHQSLKL-- 90

Query: 99  GVRR--PKDGFFLRAESYYNVASYIDQLDEEPGEQFQIPMIKDSYGGKSLHEQSHGESFF 156
            VRR  P+D FF R E+ YNVASY ++L  E                  LH+ SHGES F
Sbjct: 91  -VRRENPRDAFFFRGETMYNVASYYEELMGEKNMH-------------DLHKMSHGESVF 136

Query: 157 AAFVHRFGGQGLYILDEPEAALSPLRQMSLLVRMHELAEQHSQFIIATHSPILMSYPGAD 216
           A    RF  QG ++LDEPEA LS LRQ+ LL ++  LA   +Q I+ATHSPIL++ PGA+
Sbjct: 137 AVIDRRFNNQGFFVLDEPEAGLSMLRQLELLGKLGNLARGGAQIIMATHSPILLAIPGAE 196

Query: 217 IYLLEGEGIRPVPLEETEHYTVTKAFMNDRAG 248
           I  +   G+  V  E+ E     + F+ D  G
Sbjct: 197 ILEITSSGVAKVNFEDAEAVRAAREFVADPRG 228


>Cgl2765 [R] COG3910 Predicted ATPase
          Length = 244

 Score =  146 bits (368), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/247 (39%), Positives = 133/247 (53%), Gaps = 28/247 (11%)

Query: 2   YAMDNAML-YIRNAELLRERVPSFQAYPFDLPVIRSFNRLDFQNRVTFLVGENGTGKSTL 60
           Y  D A L ++  A    E+VP+F+       V+R    LDF+  +T + GENG GKSTL
Sbjct: 4   YITDIAALEHVGVAAAWTEKVPAFR-------VLREKRMLDFRAPITVITGENGVGKSTL 56

Query: 61  LEGIAAAWGFNPEGGTLNFSFNTRSSHSSLHEYLRLTKGVRRPKDGFFLRAESYYNVASY 120
           LE IA   GF+  GG     F  + S + L    +  KG + P  G+FLRAE+++NVAS 
Sbjct: 57  LEAIAINAGFDTAGGEHTGKF--KPSDNPLQTVAKAHKG-KEPMRGYFLRAETHFNVAS- 112

Query: 121 IDQLDEEPGEQFQIPMIKDSYGGKSLHEQSHGESFFAAFVHRFGGQGLYILDEPEAALSP 180
               DE PG               +LH  SHGES      + F G+GLY++DEPEA LS 
Sbjct: 113 -GYRDEAPG-------------WVNLHHMSHGESVMHIVQNAFVGKGLYLMDEPEAGLSF 158

Query: 181 LRQMSLLVRMHELAEQHSQFIIATHSPILMSYPGADIYLL--EGEGIRPVPLEETEHYTV 238
           +RQM++L  ++ LAE  +Q II THSP+LM+ PGA+I+     GE  R    E T  +  
Sbjct: 159 IRQMAILAELNFLAESGAQIIIVTHSPVLMAIPGAEIWEFSASGELHRGFDFEVTTAFRA 218

Query: 239 TKAFMND 245
            + F  D
Sbjct: 219 LRDFFED 225


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.321    0.138    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 20,502,250
Number of extensions: 897944
Number of successful extensions: 5616
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 5617
Number of HSP's successfully gapped: 2
Length of query: 257
Length of database: 38,378,431
Length adjustment: 104
Effective length of query: 153
Effective length of database: 26,383,695
Effective search space: 4036705335
Effective search space used: 4036705335
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 114 (48.5 bits)